Litchfieldia suaedae: IM538_23205
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Entry
IM538_23205 CDS
T08143
Name
(GenBank) FadR family transcriptional regulator
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
csua
Litchfieldia suaedae
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csua03000
]
IM538_23205
Transcription factors [BR:
csua03000
]
Prokaryotic type
Helix-turn-helix
GntR family
IM538_23205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_41
HTH_11
HTH_5
Rrf2
DnaD_N
TrmB
FadR_C
DUF4423
HTH_36
CBD_PlyG
TraY
Motif
Other DBs
NCBI-ProteinID:
QOR66625
LinkDB
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Position
4460407..4461120
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AA seq
237 aa
AA seq
DB search
MDYKRIKPKKIYEEVADAILLKIKEGEIQPGDKLSSVEQLAEKFQVGRSAIREALSALRA
MGILDIRQGEGTYVKEFDSSMLSLPFSTAVLMRPDDLSHLLEIRKILEAGAAYAAAERRT
DADLEKMKSALDRMQEGIGNEELGEKADFDFHIAIATASQNPLLVSLMNSVSEIMVETMK
ETRRLWLFGKQVTVEKLYKDHLGIFEAIKDQNTELAQQRILDHLNSVEDVLKKFIKP
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggattataaacgaattaagcctaagaaaatctatgaagaagtagcagatgctatcctc
ctcaagattaaagaaggtgagatacagccaggtgataagttaagctccgtagagcagctt
gcagaaaagttccaagttggacgttctgcaattcgtgaagccctatcagcactaagagca
atgggcatactagatattcgccaaggagaaggtacctatgtgaaggaatttgactcttca
atgctttcattgcctttttcaactgcagtacttatgagaccggatgacctatctcacttg
cttgagattcgaaaaatattagaagctggagccgcctatgcagccgctgaaagacgaaca
gatgctgatttagaaaaaatgaaatctgcactagatcgaatgcaagaaggaattggaaat
gaagagttaggagaaaaagcggattttgactttcatatagctattgctactgcttcccaa
aatcctttacttgttagcttgatgaacagcgtctctgaaataatggttgaaacaatgaag
gaaacaagaaggctctggttatttggtaaacaagttacagttgaaaagctctataaagac
caccttggaatttttgaagctattaaagaccaaaatacagaacttgcccagcaacgaatt
cttgaccatctgaattcagttgaagatgttttaaagaaattcatcaaaccttaa
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integrated database retrieval system
