Litchfieldia suaedae: IM538_23410
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Entry
IM538_23410 CDS
T08143
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
csua
Litchfieldia suaedae
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csua03016
]
IM538_23410 (mnmE)
Transfer RNA biogenesis [BR:
csua03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
IM538_23410 (mnmE)
Prokaryotic type
Methyltransferases
IM538_23410 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
RsgA_GTPase
GTP_EFTU
Ras
MMR_HSR1_Xtn
Roc
Cyc-maltodext_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QOR66660
LinkDB
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Position
complement(4499924..4501309)
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AA seq
461 aa
AA seq
DB search
MEFDTIAAISTPMGEGAIAIVRLSGEEAIAIADTIFKAKSKKKLSEVESHTIHYGNIVDP
DKDQVVEEVMVSLMRGPRTFTREDVVEINCHGGLVSVNRVLKLVLTQGARLAEPGEFTKR
AFLNGRIDLSQAEAVMDLIRAKTDRAMNVAIDQMEGRLSKLIQRLRQELLETLAHIEVNI
DYPEYDDVEEMTHTVLIEKASKVRNEIENILRTSNQGKILREGLSTVIIGRPNVGKSSLL
NSLVHENKAIVTDIPGTTRDVIEEYVNVRGVPLRLVDTAGIRETEDIVERIGVERSREVL
KKADLILLVLNFNEELSEEDEKLFEAVKGMDTIVIINKTDLPQKIDLHRVKEITISQHLV
TTSLLEEEGIDTLEEAISSMFFAGNIESSDLTYVSNSRHIALLHQAKKTIEDAIAGIEMN
VPVDMVQIDLTRTWEILGEIIGDAVHENLINQLFSQFCLGK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgatacgattgccgcaatttcaactccgatgggagagggagcaattgcgatc
gtccgtttaagtggtgaggaagcaattgcaattgccgatacgatttttaaagcaaaatcg
aagaagaaattgagtgaggtagagtcgcatacaattcactatggaaatattgtagaccct
gataaggatcaggtagtagaagaggtcatggtttctttaatgagaggaccaaggacattt
acgagagaagatgtcgttgaaataaattgtcatggtggacttgtttctgtaaatagagtg
ttaaagcttgtactaactcaaggtgcaagattagcagaaccaggtgaatttacaaaacga
gcttttttaaatggaagaattgatttatcccaggctgaagccgtcatggatttaataaga
gctaagacggatcgtgctatgaatgtagccattgaccaaatggaagggcgtttatccaag
cttattcaaaggttaagacaggagctacttgaaactttagctcatattgaagtgaatata
gattatccagagtatgatgatgttgaggaaatgacacatacggttctaatagaaaaagct
tcgaaagtacgtaatgaaatagaaaacatactacgaacctctaaccaaggcaaaatcttg
cgtgagggattatcaactgttatcatcggtaggccgaatgtaggtaaatcttcattatta
aatagtcttgtccatgaaaataaggctattgtaacagacataccaggcacaacgcgtgac
gtaattgaagaatacgtaaatgtaagaggagttccgcttagacttgttgatacggcaggt
atacgtgaaactgaagatattgttgaacgtattggggtagaacgctctagagaagtacta
aaaaaagcagatttgatactattagtacttaattttaatgaagaattatctgaagaagac
gaaaaattatttgaagctgttaaaggaatggacacgattgtcattatcaataaaacagac
cttcctcaaaaaattgatttacatagagttaaggagattacaataagtcagcatttagtt
acgacatctctattagaagaagaaggtattgatacattagaagaagcgatttcatctatg
ttttttgcaggaaatattgaatcgagtgatttaacatatgtttctaattcccgtcatata
gcacttttacatcaagccaaaaagacaattgaagatgcaattgcaggaattgaaatgaat
gttccagttgatatggtgcaaattgatttaacaagaacgtgggaaatacttggagaaata
attggcgatgccgtacatgaaaatctaatcaatcagttattctctcaattttgtcttgga
aagtaa
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