Carboxydichorda subterranea: U7230_05425
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Entry
U7230_05425 CDS
T10456
Symbol
fliF
Name
(GenBank) flagellar basal-body MS-ring/collar protein FliF
KO
K02409
flagellar M-ring protein FliF
Organism
csub Carboxydichorda subterranea
Pathway
csub02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
csub00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
U7230_05425 (fliF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
csub02044
]
U7230_05425 (fliF)
02035 Bacterial motility proteins [BR:
csub02035
]
U7230_05425 (fliF)
Secretion system [BR:
csub02044
]
Type III secretion system
Flagellar export apparatus
U7230_05425 (fliF)
Bacterial motility proteins [BR:
csub02035
]
Flagellar system
Flagellar assembly proteins
M, S, P and L rings
U7230_05425 (fliF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YscJ_FliF
YscJ_FliF_C
DUF4381
Motif
Other DBs
NCBI-ProteinID:
WRP18446
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Position
1158267..1159820
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AA seq
517 aa
AA seq
DB search
MGAALERLWQQLRTIWQGMGRTARLATAGGVVAAVILLAAMVWVAGRPRYQPVFTGLGTE
DLRAVTVALQERHLDFRVDEAQGAVYVPEPQVHQVRLDLAMQGLPKNSVVGFEILKETNL
GLTDFERRLRYYWALQGELTRTIRAVQGVQDARVHIVIPERSLFIAEQQPATASVLLTLM
PGVTLSRDQVRGIVHLVANSVEGLTPEHVTVVDQKGTVLSDALDAAGSGSAARTAIAEQL
QLKRTYERELERSLQATLEQIWGPGHVLVRVTADLSFDQQEEKHEIFSPVVNGRSGIIRS
EQRTEESAVGQTGAPPAGIPGVTSNIPGYVEPAGGGGPSQMQRLESVTNYEINRVERHIV
MAPGRIQRLSAAVFIDGPTMDALQRQRTEQLVSAALGLQPQRGDQVTVESMVFGAAQAPS
ALQGQLLATQARPGVQGVAWWLAALALAVGVAYWVNRRMRAARQRVQVTMPPVVPETAEP
SPEEQERRRMRQEIEQLAREKPEEFVQLLRSWLVEES
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgggagcggccctagagcggctgtggcagcagctgcgaacgatatggcagggcatgggg
cgtacggccaggctggcgacggccggtggtgtcgtcgccgcggtcatcctgctggcggcg
atggtctgggtcgccgggcggccccgttaccagccggtcttcaccgggctgggcaccgag
gacctgcgggccgtcacggtggcgctccaggagcgccacctcgacttccgcgtggacgag
gcgcagggcgccgtctacgttcccgaaccgcaggtgcaccaggtgcgcctggacctggcc
atgcagggactgcccaagaacagcgtcgtgggcttcgagatcctcaaggagaccaatctg
gggctgaccgacttcgaacgccgcctccggtattactgggcgctgcagggcgagctcacc
cgtaccatccgtgcggtgcagggcgtccaggatgcccgggtgcacatcgtcatcccggag
cgcagcctcttcatcgccgagcagcagccggccacggcatcggtgctgctgacgttgatg
ccgggggtgacgctgagccgggatcaggtgcggggtatcgtccacctggtggccaacagc
gtcgaaggcctgactcctgagcacgtcacggtcgtcgaccaaaaggggaccgtcctctcc
gacgccctcgacgccgccggcagcgggagcgccgcccgcaccgccatcgccgagcagctg
cagctcaagcgcacctacgagcgggagctcgaacgcagtctgcaggccaccctcgagcag
atctgggggccggggcacgtgctcgtgcgggtgacggccgatctctccttcgaccagcag
gaggagaaacacgagatcttctcgccggtcgtcaacggccgcagcggcatcatccgcagc
gagcagcgcacggaggagagcgcggtcgggcaaaccggcgccccacccgcggggatcccc
ggggtgacgtccaacattcccgggtacgtggagccggcgggcggcggcgggccgtcccag
atgcagcgcctcgagagcgtcaccaattacgaaatcaaccgggtcgagcgccacatcgtc
atggcgcccggccgaatccagcggctgtcggccgctgtcttcatcgacggccccaccatg
gacgcgctccagcgccagcggaccgagcagctggtcagcgcggccctgggcttgcagccc
cagcgcggggatcaggtgacggtcgagagcatggtcttcggggcagcgcaggcgccgtct
gcgctgcaagggcagttgctggcgacacaggcccggccgggggtgcagggagtggcctgg
tggctcgccgctctggcgctcgccgtcggtgtggcgtactgggtcaaccggcgcatgcgg
gccgcccgccagcgggtccaggtgaccatgccgccggtggtgccggagacggcggagccc
tctccggaagagcaagagcggcgcaggatgcgccaggagatcgagcagctcgctcgggag
aagcccgaggagttcgtccagttgttgaggtcctggctggtggaggagtcctga
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