Carboxydichorda subterranea: U7230_06925
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Entry
U7230_06925 CDS
T10456
Name
(GenBank) IS3 family transposase
Organism
csub Carboxydichorda subterranea
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Gene cluster
GFIT
Motif
Pfam:
HTH_21
rve
HTH_Tnp_1
rve_3
rve_2
Phage_terminase
HTH_23
HTH_Tnp_ISL3
Sigma70_r4_2
HTH_28
HTH_3
Sigma70_r4
TnsD
DUF7552
YdaS_toxin
DUF7726
HTH_29
Motif
Other DBs
NCBI-ProteinID:
WRP18720
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Position
join(1460400..1460659,1460658..1461585)
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AA seq
395 aa
AA seq
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MPPTRPPYPPEFRAEAERLVRTSGKTQKEIAADLGVSTESLRKWVRQAQMDAGEREGLTT
TEREELQRLRRENRILREERAILKKPRGLLCSGDRPDPVAAFRFVEHPKAEHAVAMRCRV
RDVSTSGYDAWRRRPPSRRAQQDRALMDRIRAIHVASRGTYGAPRVWAELRMAHGLSCSR
KRVARLMRQLGLQGAHRRKTRGLTRRDPRRPVFPDRVQRVFAADAPNRLWVADLTQHPTD
EGWLYLATVLDAFSRRVVGWAMGERPTAELAIDALNMAVGNRRPRGERVHHSDHGAPYTS
LVFSRRLEAAGILGSMGSVGDALDNAVAESFFATLQTELLDRRSWPARQALKTAVFESIE
AFYNRRRRHSALGYLSPQDFERRWHLHHEVPATAA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
gtgccaccaacccgacctccctatccgccggagttccgcgccgaggccgagcggctcgta
cgcacctccggcaagacgcagaaggagatcgccgccgacctcggggtctccaccgaatcc
ctgcgcaaatgggtgcggcaggcccagatggacgccggcgagcgcgagggcctgacgacg
accgaacgggaagagctgcagcggctgcgccgggagaaccgcatcctgcgggaagagcga
gcgatcctgaaaaagccgcgcggccttctttgctcgggagaccgaccggacccggtagcc
gcgttccggttcgtggagcacccgaaggccgagcacgccgtcgccatgcggtgtcgggtg
cgggacgtctccaccagcgggtacgatgcatggcgccgtcgcccgccctcccggcgggcc
caacaagaccgggcgctcatggatcgcatccgggccatccatgtggccagccggggcacg
tacggagcgccccgggtgtgggcggagctgcgcatggctcacggcctctcctgctctcgc
aagcgggtggcccggctgatgcggcagctgggcttgcagggagcccatcggcgcaagacc
cggggcctcacccgccgggacccccgccggccggtcttcccggaccgggtgcaacgcgtc
ttcgccgccgacgcgcccaaccgcctttgggtggccgacctgacccagcacccgaccgac
gaggggtggctgtacctggcgaccgtcctcgacgccttctcccgccgggtggtgggctgg
gccatgggggagcggcccacggcggagctggccatcgacgccttgaacatggccgtcggg
aatcgacggccccggggcgagcgggtccatcactccgaccacggcgccccgtacacctcc
ctggtcttcagccgccgcctggaggcggccgggatcctgggctccatgggctcggtaggc
gacgccctggacaacgcggtggcggagagcttctttgccacgctgcagacggagctgctg
gaccggaggtcctggccggcccgtcaggccctgaagacggccgtcttcgagtccatcgag
gccttctacaaccgtcgtcgacgccactcggccctgggatacctgagtccgcaggacttc
gagaggaggtggcacctccaccacgaagtccccgctacggctgcttag
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