Carboxydichorda subterranea: U7230_10345
Help
Entry
U7230_10345 CDS
T10456
Name
(GenBank) DEAD/DEAH box helicase
Organism
csub Carboxydichorda subterranea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_assoc
WH_Lhr
DEAD
WH4_Lhr
Helicase_C
Cas3-like_C_2
DIP2311-like_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
WRP16493
LinkDB
All DBs
Position
2226017..2230561
Genome browser
AA seq
1514 aa
AA seq
DB search
MAAYFRERFGAPTLAQRMAWPAIRSGRDTLVAAPTGSGKTLAAFLVSLDDLIRRPVPSNP
ALHTLYVSPLRALSHDIHRSLELPLRDLQRLFVQTARRPFPPIDVGVRTSDTPPARRRAM
ATKPPHILVTTPESLLLMMLAPRMRPALASVRRVIVDELHALLPTKRGALLALCLELLDE
LAGRRVQRIGLSATIRPLEEAARFLTGTRQPGAEVVDAGARRTMDLQVILPAAAFPSAPE
GTIWPSIARRLVDLIESHRSTLVFVNNRRQAERLTHLVNELAGRRLALTHHGSMARASRL
YVEQALKAGELKAVIATATLELGIDVGFIDLVVHVESPPEVAQGLQRVGRSGHAVHASAK
GRILPKHPSDLLEAAACARAIARFDIEPLAPVRQPADVLAQFVAGAATIRPWREPELLAL
VRRTASFSGISEEMWHEVLGLLAGETPGRPDVPVRPRIAWDRRDGAIRGIDATRTVLYAN
AGTIPDRGTYPVYLSGTDVRLGELDEEFVYETRRGDVFWLGMGAWRVEAIRPDRVLVSRA
SGVVAKVPFWRGEGLSRSSHLGRHVATLLEELEPLLAAGQEAAGRARIRQECHADDDAAG
ALVDYLTRQLRACGTLPGPHRVVVESFPDELGDRRLAIHSPLGRRLNQAWALAQIAWARR
HLGLELDTAVADDGILLRLPGEYLLEDASPLVALEGEDPESLIDAELPGTHLVAQLFREA
AGRALLITRPHRRRRLPLWQQRLRAADLMLLQSAHGQRPGVLVREALREARQDVLDVTAM
AALVRAIRTGEVEVRTVTLPAPSPFAASLLFQFTATFLYEPDAPKAERQAAVLMGTAPQA
LQEAAADGSLPRLLHPDAIREVSRRRAFPPWLRQRPPRSIQEMDEWLRHAGDVSDDELAA
MLGHEQRPTAREWLERLAEQGRVTHEGGLWIHEGILPLLQAARREEGPEAQDAARMLLER
KALAGGPLDAEAAARRYGLSLPLVERALMELVASGDLVHGVLEEGGPARFVATPALVEMR
RLTLIQARQLSEPISLAAFLRFLAARHRLVPSEGQPPALFPSGTALAPDAAAEAARRLMG
WSAPYRDWLRVLLPVRLGPRASQLLAAAVAAGRLGWLRVPASPRAGAGGEPAPRGAGPSL
WTVFPRAELPLVAALFETDSRAEALDPGDRPLLEALGAGGSWFPWELAGRLGLPEPAIRD
GLTRLVRQGLASAEAMALVERLGAEGLPGPQLPKSRPGPLGPAGYRALGRRMREAARERA
RLAALRSRQAAVSMAGDLDTTRFYGVLPLPDGPSPASAWARALVERYGVVARELHRQEGV
PLPWAHVAQALEQQEARGGVVRGYFVEGLSGEQFAPKELVDVLREWHEPRSETMWAASLR
DPVLLPLHFAAPPAWWPPGPRAEGAWCVLADGMPVLLVQVASGSLWFAPGASPQTLVRAA
RLFLERLTATGQGRRLVVRSIQGRPVGEARKSGEAAWLKDAGFIEGPRTLEHWLDPFSGG
RPTEWHGTSTQCGP
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
gtggcggcctacttccgggagcgtttcggcgcgccgacgcttgcccagcgcatggcgtgg
cccgccatccgatccggccgggatacgctcgtggcagcgccgacgggctcgggcaagacg
ctggccgcattcctggtgagcctcgacgacctgatccggcgtcccgtcccctcgaatccc
gctctgcacacgctgtacgtctcgcccttgcgtgccctgagccacgacattcaccggagc
ctcgaactccccttgcgcgacctgcagcgccttttcgtacaaacggcccggcggcccttt
cctcccatcgacgtgggggttcgcacgtcggatacgccgcctgcgcggcggcgggccatg
gccacgaagcctccccacattctcgtcaccaccccggaatcgctgttgctcatgatgctg
gcgccccgcatgcgcccggctcttgccagcgtgcggagggtcatcgtcgacgaactgcac
gccctcctgcccaccaagcgcggggcgcttctggcgctgtgtttggagctgctcgacgag
ctggccggccgccgggtgcagcgcatcggcctgtcggccaccatccggcccctcgaggag
gccgctcgcttcctcaccggcacccggcagcctggcgccgaagtggtcgacgccggcgcc
cgccgcaccatggacctgcaggtgatcttgcccgccgccgcgttcccctccgccccggag
ggcaccatctggcccagcatcgcccgccgcctggtggatctcatcgaaagccatcgttcc
accctggtcttcgtcaacaaccggcgccaggccgagcgcctcacccacctggtcaacgaa
ctggcggggcggcgcctggcgctgacccatcacgggagcatggcccgggccagccgtctc
tacgtcgaacaggcgctcaaggcaggcgagctgaaggccgtcatcgccaccgccacgctg
gaactggggatcgatgtgggcttcatcgatctcgtggtgcacgtcgagtcgcctccggag
gtcgcccaggggctgcagcgggtcgggcggtccgggcacgcggtccacgcgtcggccaaa
ggacgcatcctgcccaagcatccttcggacctgctggaggcggccgcctgcgcccgggcc
attgcccgcttcgacatcgagccgctggcgccggtgcggcagccggcggacgtgctggcc
cagttcgtcgccggggcagccaccatccggccctggcgcgagcccgagctgctggccctc
gtgcggcgcaccgcgtctttctcgggcatttccgaggaaatgtggcacgaggtgctgggc
ctgctggccggcgagacgcccggccggcccgacgtgcccgtccggccgaggatcgcctgg
gaccgccgggacggagcgatccggggaatcgatgcgacccggaccgtgttgtacgccaac
gcgggcaccatcccggatcggggcacgtatcccgtctacctttccggcacggacgtgcgg
ctgggcgagctcgacgaggagttcgtctacgagacgcgcaggggtgacgtcttctggttg
gggatgggcgcctggcgcgtggaggccatccgcccggaccgcgtcctggtcagccgtgcc
tccggcgtcgtggccaaagtgccgttttggaggggcgagggcctcagccgctcctcccac
ctgggccgccacgtcgccacgctgctcgaagagctcgagccgctgctcgccgcgggccag
gaggcggccggccgggcccgcatccggcaggagtgccacgctgacgacgatgccgccggc
gccctggtcgactacctgacgcgccagctcagggcgtgcggcaccctgcccgggccgcac
cgggtcgtggtcgagagctttcccgacgagctgggagaccggcgcctcgccatccactcg
cccctggggcgccggctcaaccaggcctgggccctggcgcaaatcgcctgggctcgccgt
cacctcgggctggagctcgacaccgcggtggccgacgacgggatactgctgagattgccc
ggcgagtacctcctggaggatgcctcccccctggtagcgctcgagggagaggacccggag
agcctgatcgacgccgagcttccgggtacccacctcgtcgcccagctgttccgggaggcc
gcaggccgcgcgctgctcatcacccgcccccaccggcgcaggcggttgcccctgtggcaa
cagcgactgcgcgccgccgacctgatgctgctgcagtccgcccatgggcagcggccgggt
gtgctcgtgcgggaggccctccgggaagcccgccaggacgtcctggacgtgaccgccatg
gccgcgctggtacgggcgatacgaacgggcgaggtcgaggtgcggacggtcacgttgcct
gccccctcgccctttgccgcatcgctcctcttccagttcaccgccaccttcctctacgag
cccgacgcccccaaggcggagcggcaggcggcggtcttgatggggacggcgccgcaggcg
ctgcaggaggccgccgcagacggtagcctaccgcgtttgctccacccggacgccatccgg
gaagtctcccggcggcgggcctttcccccctggctgcggcaacgcccccctcgctccatc
caggaaatggacgagtggctgcggcacgcaggggacgtgtccgacgacgaattggccgcc
atgctgggccacgagcaacggcccacggctcgcgagtggctcgagaggctggccgaacag
ggccgggtcacgcacgaggggggcctgtggatccacgaagggatccttcccctcctgcaa
gcggcacgccgggaggaagggcccgaggcccaggacgcggcccggatgctgctcgagcgc
aaagcgctggccggcggcccgttggatgccgaagcggcggcccggcgctacgggctgagc
ctcccgctggtggagcgggcgctcatggagctggtcgcttccggcgacctggtgcacggg
gtgctggaggagggcggccccgctcgcttcgtcgccacgccggccctggtcgagatgcgc
cggctgacgctcatccaggcccgccagctcagcgagccgatctccctggccgccttcttg
cgcttccttgcggcccggcacaggctcgtgccgagcgaaggccagccgcctgctcttttc
ccgtccggcacggcgctcgcccctgacgcggccgccgaggcggcgcgccgcttgatgggg
tggtccgcgccgtaccgcgactggctgagggtgctgttgccggtacgcctggggcccagg
gcctctcagctcctggccgcagcggtggcggccgggcgcctcggctggctgcgcgtgcct
gcatcgccccgcgcaggcgccggcggcgagcccgcgccccgaggcgccggcccttcgctc
tggaccgtctttccccgagccgagctgcccctggtggccgcgctgttcgagacggactcc
cgggcggaagcgctcgaccccggggatcggccgctcctcgaagccctcggcgccggcggg
agctggtttccctgggagctcgccggccgcctcgggctgcccgagccggcgatacgggat
ggcctgacccgcctcgtccgccaggggctcgcctcggccgaggccatggcgctggtcgaa
cggctgggtgcggaagggttaccggggccgcagctcccaaagtcgcggcctggcccgctg
ggacctgccggataccgggccctggggcgccggatgcgagaggcggctcgcgaaagagcc
cgcctcgcggccctccggtcgcggcaagccgccgtgagcatggccggcgacctcgacacc
acccggttctacggggtcctccctcttccggatgggccatcgcccgcctccgcgtgggcc
agggcgctggtggagcgttacggggtcgtcgcccgggagctccaccggcaggagggggtg
ccgctgccctgggcacacgtcgcccaggccctggagcaacaggaggcgcgcggcggcgtc
gtgcgggggtacttcgtggaagggctcagcggagagcagttcgccccgaaggagctcgtc
gatgtcctgagagagtggcacgagccccgctctgagaccatgtgggccgcttcgttgcgc
gatccggtgctgctccccctccacttcgccgcgccgccggcgtggtggccgccagggccc
agagcagagggcgcctggtgcgtactggcggacgggatgccggtgctgctggttcaagta
gcttcggggtcgctctggtttgcacccggggcgagcccccaaaccctcgtccgggctgcc
cgcctcttcctggagcgcctcaccgccaccggccaggggcggcgcctggtggtccgctcc
atccagggccgccccgtgggcgaggcccgcaagagcggtgaggccgcgtggctgaaagac
gccggcttcatcgaagggccccgcacgctggagcactggctcgacccgttctcgggcggc
cggcctacggaatggcacggaaccagcacgcagtgcggaccgtag
DBGET
integrated database retrieval system
