Carboxydichorda subterranea: U7230_15070
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Entry
U7230_15070 CDS
T10456
Name
(GenBank) efflux RND transporter permease subunit
Organism
csub Carboxydichorda subterranea
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WRP17381
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Position
complement(3258978..3263351)
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AA seq
1457 aa
AA seq
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MERFVEQAIRRPVLVSMLVLAVIVVGSTAVTRMGLDLLPDIEVPVVAVVTVYPGAGPDAV
EQQVTNPIEQALTLVPGISRTTSLSLENVSLVVAEFGWGTHVPLAVQDVDEALQRIRLTL
PSDTQPPAVLRFDPTQMPMAMYALTAARDAPAGAAELPKLTQVAREVVVPLLDRVEGVGR
VVVSGGTTDEVQVRYDPGALSEAGLSAAQLVQLLTYQNVEVPVGAITEGGRRLQVRAGAP
LRSVEQLRELPVAIQRPGEGAPGLLPRLVHLGDVASVELVHRPPEGFARIDGRPSLLIAV
QKEAGYNTVVVARRIAGALASARHALEGWELVPVFQQAEFIVRSIRSVTQSGIIGGVLAV
AVLYLFLLDILSTLTIALAIPISIVATVAFMFLDGMTLNLMSLGGLGLGIGMLVDNSIVV
LESIFRHARAGEPPGVAARRGAAEVGLAISASTFTTVVVFLPVVFVGGLAGRIFRQLALT
VSFSLLASLAVSLTVVPMMAARLGLASNGSLAAAVSQLAARRRGRHWFGPVRDAYERLLR
WSLRHRTALWGAVALILAAAVAAYGQLDVELLTPVDAGLLGVTVRMPGATPLERTDEVAR
RVEQAVARVPGVAAVATQGGSAGTGDLLSVMGGESANAANLYVLLAPRSTGRHRASEIAR
AVRQAVSGVLHDVPGAQGTVTDTPTLGLVGELLARRVTLQVTGRDPSTLQRVASEVAARL
RQVPGFVNVSTSLDERAPALLLRVDPGRALFGGLVAGQVGGALRQAVTGAPAGKLVLADG
RQLPVVVRAEPGSVNSLEGLMRYPVSGLALPGAKPPQVQVGRVTSPENVLQEPAIQHRDG
RRVVVVTAELQGVQLGEAGRRALAAIRDVTVPAAHDVILAGVHELMGEAFADLWLALALA
VVLVYMVMAAQFESLLDPLIIMITVPLGLAGGVLALWLTGHQVGITSILGGVVLAGIAVN
NGIVLIDYVNQVAGRVASFEEAVVQASVVRLRPVLMTALTTIFGLVPLTLGWGEAAELEV
PLAVTVVGGMVLATGLTLLVVPALKLSLHGVKLSHRVPASALPAQPGWLAPAVAGAALMT
LLAASSARAAAPPADAWKLQGGAVGLGATYCGSSQEEARDGGICGGWAGGLVEASRIEAG
GAVSAADLQVALGIERGPEGPTWMPQVGGRMVRSRALGLLGYSSTMGSVWLQGRLPRVAP
STVEAMGRFTGSVAAGNVMLGATVQGTTTGFREQALLLDASGMALWLDDPGPGWGGRAMG
RFRFNRTWSVAASAGWHKRPDPPNNAAPGGANVVDTPLDGPRMGAGVEWRGFPWAAIQAG
GGARYSEALQYWVMQLSAGVTLNVARTLSASVDVIADVGASDAPPGVRHAPVAATVMLQG
GTSTGPVVAVGLRTPPVPAGSDAVASSSPLALSPDILATLTLPVSWEMAGRPVRQVRLLA
AWQAAERKAELSAAFPF
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcttcgtcgagcaagccatccgtcgtcccgtcctggtcagcatgctggtgctg
gccgtcattgtcgtaggcagcacggccgtcacccgcatggggctcgacctgctcccggac
atcgaggtgcccgtggttgcggtcgtcacggtctacccgggagccgggcccgacgccgtg
gaacagcaggtcaccaaccccatcgagcaggcgctcaccctggtgcccgggatcagccgc
acgacgtcgctcagcctggaaaacgtctcgctggtcgtcgccgagttcggctggggcact
cacgtgcccctggccgtgcaggacgtcgacgaggcgctgcagcgcatccggctgaccctg
ccctcggacactcagccccctgccgtcctgcgattcgaccccacgcagatgccgatggcg
atgtacgccctgacggcggcccgggacgctcccgccggcgccgcggagctgccgaagctc
acccaggtggcccgcgaggtcgtcgtgcccctgctcgaccgggtcgaaggcgtcgggcgg
gtggtcgtttccggcggtaccacggacgaagtgcaggtgcgctacgaccccggcgccctg
tccgaggccggcctttcggcagcgcagctcgtgcagctgctcacctaccagaacgtcgag
gtgcccgtcggggcgatcaccgagggcgggcggcgtctccaggtgcgggccggagcaccc
ctacgatcggtcgagcaactgcgcgagctcccggtcgccatccagcggcccggggaagga
gctccgggcttgcttccccggctcgtgcacctcggggacgtcgccagcgtcgagctggtc
caccggccgcccgagggttttgcccgcatcgatgggcggccgtcgctgctcatcgccgtc
cagaaagaggccgggtacaacaccgtggtcgtcgcccgccggatcgccggcgcgctggcg
tcggcccggcacgctctggaaggctgggagctcgtcccggtcttccagcaggcggagttc
atcgtgcgctcgatccggagcgtcacgcaaagcggcatcatcggcggcgtgctggcggtc
gcggtgctttacctgttcttgctggacatcctcagcacgctcaccatcgctctggccatt
ccgatctccatcgtggcgaccgtggcgttcatgttcctcgacggcatgaccctcaacctg
atgagcctgggcgggctcggcctcggcatcgggatgctggtcgacaattccatcgtcgtg
ctggagagcatcttccgccacgcccgcgcgggggagccgcccggcgtcgcggcgcgacgg
ggcgccgccgaagtggggctcgccatctcggcctcgaccttcacgaccgtggtggtcttc
ctgccggtcgtcttcgtgggcgggctggcgggccgcatcttccgccaattggccttgacg
gtgagcttctcgctcctcgcctccctggccgtctccctcaccgtggtcccgatgatggcc
gcccggctcgggctggcctccaacgggtcgctcgccgctgccgtgtcgcaactggcggcc
cggcgccgcgggcgacactggttcggcccggtacgggatgcttacgaacggctgctgcgc
tggtcgctgcgccaccgcacggcgctgtggggtgcggtcgcgctgatcctggcggcggcg
gtcgccgcgtacgggcagctcgacgtggaactgctcacgccggtcgacgcgggcctgctc
ggcgtgaccgtgcgtatgcccggcgccacacccctggagcgcaccgacgaggtggcgcgg
cgggtcgagcaggccgtcgcccgggtgcccggcgtggcagccgtggcgacgcaggggggc
agcgccgggacgggggatctcctgtcggtgatgggcggggagtccgccaacgccgccaac
ctctacgtcttgctcgcacctcgctcgaccggccgtcaccgggcgtccgaaatcgcccgg
gcggtacggcaagcggtgagcggcgtgctccacgacgtccccggtgcacaaggcacggtc
acggatacgccgacgctcggactggtgggcgaactccttgcgcggcgcgtgaccctacag
gtcacgggccgtgatccgtccaccctgcagcgcgtcgcctccgaggtggcggcccgcttg
aggcaggtccccggcttcgtcaacgtgtcgacctcgctcgacgagcgcgccccggccctg
ctgctccgggtcgacccagggcgagccctcttcggcggcctcgtcgccggccaggtgggt
ggggccctgcgccaggcggtgacgggcgctcccgcagggaagctcgtgctcgccgacggc
cgccagcttcctgtggtggtgcgggcagagcccgggtccgtgaacagcctcgaggggctg
atgcgctacccggtgagcggcctggcgttgcccggcgccaagccccctcaggtccaggta
ggacgcgtcacctctcccgagaacgtcctgcaagaaccggccatccagcaccgcgacggg
cgccgggtcgtggtggtcacggccgaactccagggagtgcagctgggcgaggcagggcgg
cgggcgctggcggccatccgggacgtcaccgtgccggcggcgcacgacgtcatcctggcc
ggcgtgcacgagctgatgggcgaggcgttcgccgacctgtggctcgcgctggcgctggcc
gtggtgctggtgtacatggtgatggcggcgcagttcgagtcgcttctggatccgttgatc
atcatgatcacggtgccgttggggctcgccgggggcgtcctggccttgtggctcacaggc
catcaggtaggcatcacgtcgatcctgggcggagtcgtcctggccggcattgcggtcaac
aacgggatcgtgctcatcgattacgtcaaccaggtagcggggcgggtggcgtcgttcgag
gaggcggtggtgcaggcgtcggtggtgcgcctgcggcctgtcttgatgacggcgctcacc
accatcttcggcctcgtgcccctgacgctgggttggggagaagccgccgaactggaggtg
ccactggccgtgaccgtcgtgggtggcatggtgctggcgacggggctcacgctgctcgtc
gtgccggccctcaagctgtcgctgcatggcgtgaagctctcgcaccgggtcccggcatcg
gctctgccggctcagccagggtggctggccccggcggtggcgggagccgccctcatgacc
ctgctcgccgcctcgtcggcccgggcagcggccccgccggcggatgcgtggaagctccag
ggcggtgcggtgggcctgggcgcgacctattgcggttccagccaggaggaggctcgcgac
gggggtatctgtgggggatgggcgggcggcctcgtagaagcgagccgcatcgaggcggga
ggcgctgtctcggcggccgacctgcaggtggctctggggatcgaacgaggccctgagggc
ccgacgtggatgccccaggtaggcggccgcatggtgaggagccgggcgctggggttgctc
gggtactcgtcgacgatggggagcgtgtggcttcagggacggctgccgcgcgtggctccc
tcgacggtcgaagccatgggacgctttacgggctccgtggccgcaggcaacgtgatgctg
ggcgccaccgtccagggtaccaccacgggatttcgggagcaggcgctgctgctcgatgcg
agcggcatggcgttgtggctggacgacccaggccccgggtggggcgggcgagcgatgggc
cgcttccggttcaaccgtacctggtccgtggcggcgagcgcaggatggcacaagcgtccg
gatccgcccaacaacgccgctcccggcggcgcgaacgtggtggacacacccctggatggg
ccgaggatgggggcgggcgtcgagtggcgcgggtttccatgggccgcgatccaggccggg
ggcggcgctcgctattctgaagccctgcagtactgggtcatgcagctctccgcgggggtg
accctcaacgttgccaggacgctttcggcgagtgtcgacgtgattgcagacgtgggcgct
tccgacgcgccgcccggcgtgcggcacgcccccgtagccgctaccgtcatgctccagggg
ggcacgtcaacggggcccgtggtggccgtcggcctgcggactccacccgtaccggcggga
agcgacgccgtcgcttcatcgtcacccctggccctctctccggacatcctggccacgctc
accctgcccgtgtcgtgggagatggcaggccgcccggtccgccaggtacggctgctcgcg
gcctggcaagcagccgagcgcaaggctgagttgagcgctgcctttcccttctga
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