Corynebacterium suedekumii: QP029_05785
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Entry
QP029_05785 CDS
T09531
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
csue
Corynebacterium suedekumii
Pathway
csue03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csue00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QP029_05785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csue03021
]
QP029_05785
03400 DNA repair and recombination proteins [BR:
csue03400
]
QP029_05785
Enzymes [BR:
csue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QP029_05785
Transcription machinery [BR:
csue03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QP029_05785
DNA repair and recombination proteins [BR:
csue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QP029_05785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
WIM71601
UniProt:
A0ABY8VRE8
LinkDB
All DBs
Position
1156392..1159895
Genome browser
AA seq
1167 aa
AA seq
DB search
MLEGPILAVSRQTKSVADIPGAPKRVSFAKISEPIEVPGLLDLQLDSFAWLIGTPEWRAR
QQEERGPEARVTSGLEDILDELSPIQDYSENMSLSLSEPRFEPVKNSIDECKDKDINYSA
PLYVTAEFINNETQEIKSQTVFIGDFPMMTPKGTFIVNGTERVVVSQLVRSPGVYFDQTI
DKSTERPLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTTEQIKER
FGFSEIMMSTLESDGVANTDEALLEIYRKQRPGEQPTRDLARSLLDNAFFRAKRYDLAKV
GRYKINRKLGLGGDHDGLMTLTEEDIATTLEYLVRLHTGERSMTSPTGETIPVETDDIDH
FGNRRLRTVGELIQNQVRVGLSRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFFG
TSQLSQFMDQNNSLSGLTHKRRLSALGPGGLSRERAGIEVRDVHPSHYGRMCPIETPEGP
NIGLIGSLASYARVNAFGFIETPYLKVVDGRVTDEVDYLTADEEDRHSIAQASIERDADG
VITADRIEVRVKDGDIGVVTTGKDVDYIDVSPRQMVSVGTAMIPFLEHDDANRALMGANM
QKQAVPLVRAEAPYVGTGMEKRAAYDAGDMVITPKAGVVENVSADVITIMDDEGIRDTYM
LRKFERTNQGTCYNQTPLVNIGDRVEAGQVLADGPGTFNGEMSLGRNLLVAFMPWEGHNY
EDAIILNQSIVEQDILTSIHIEEHEIDARDTKLGAEEITREIPNVSEDVLRDLDDRGIVR
IGADVRAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGENGKVIGVR
RFSREDDDDLAPGVNEMIRVYVAQKRKVQDGDKLAGRHGNKGVVGKILPPEDMPFMADGT
PVDIILNTHGVPRRMNIGQVLEIHLGWLAAAGWSVDPEDPSNAELISTLPEELYDVPAGS
LTATPVFDGASNEELSGLLRNSRPNRDGDVMVNENGKAQLLDGRSGEPFPYPVSVGYMYM
LKLHHLVDEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLT
IKSDDVVGRVKVYEAIVKGENIPDPGIPESFKVLLKELQSLCLNVEVLSADGTPMELTTD
DDDELDSAGSSLGINLSHDERSDADAM
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
gtgctggaaggacccatcttggcagtctcccgccagaccaagtcagtggccgacatcccc
ggagctccgaagcgagtctcgttcgcgaagatctccgagcccatcgaagttccgggtctc
ctcgacctgcagcttgattccttcgcatggctgatcggtacgcccgagtggcgcgcccgc
cagcaggaggagcgtgggccggaggcccgcgtcaccagtggactcgaggatattctcgac
gagctgtccccgattcaggactactccgagaacatgtccctgtcgctgtccgagccgcgc
ttcgagccggtgaagaactcgatcgacgagtgcaaggacaaggacatcaactactctgcg
ccgctgtacgtgaccgcagagttcatcaacaacgaaacccaggagatcaagtcccagacg
gtcttcatcggcgacttcccgatgatgaccccgaagggcaccttcatcgtcaacggcacc
gagcgtgtcgtggtctcccagctcgtgcgctccccgggtgtctacttcgatcagacgatc
gacaagtcgaccgagcgtccgctgcactccgtcaaggtcatcccgtcgcgcggtgcctgg
ctcgagttcgacgtggacaagcgcgacaccgtcggtgtccgcatcgaccgcaagcgtcgc
cagcccgtcaccgtcctgctcaaggccctcgggtggaccaccgagcagatcaaggagcgc
ttcggcttctccgagatcatgatgtccaccctcgagtccgacggtgtggccaacaccgac
gaggcactgctggagatctaccgcaagcagcgcccgggcgagcagccgacccgcgacctc
gcacgttccctgctcgacaacgccttcttccgcgccaagcgctacgacctggccaaggtc
ggccgctacaagatcaaccgcaagctcggcctgggcggcgaccacgacggtctcatgacg
ctgaccgaggaggacatcgccaccaccctcgagtacctggtccgcctgcacaccggcgag
cgttccatgacctccccgaccggcgagaccatcccggtggagaccgacgacatcgaccac
ttcggtaaccgtcgtctgcgtaccgtgggtgagctcatccagaaccaggtccgcgtcggc
ctgtcccgcatggagcgcgtcgtccgcgagcgcatgaccacgcaggacgccgagtccatc
accccgacctcgctcatcaacgtccgccccgtctccgcggcgatccgtgagttcttcggc
acctcccagctgtcgcagttcatggaccagaacaactcgctgtcgggcctgacccacaag
cgtcgtctgtccgcgctcggcccgggtggtctgtcccgtgagcgcgccggcatcgaggtc
cgcgacgtgcacccgtcgcactacgggcgcatgtgccccatcgagacccctgagggcccg
aacatcggtctcatcggctccctggcgtcctacgcccgggtcaacgccttcggcttcatc
gagaccccgtacctcaaggtcgtcgacggccgcgtcaccgacgaggtcgactacctcacc
gctgacgaggaggaccgccactccatcgcgcaggcctccatcgagcgcgacgccgacggt
gtcatcaccgccgaccgcatcgaggtccgcgtcaaggacggcgacatcggtgtcgtcacc
accggcaaggacgtcgactacatcgacgtctccccgcgccagatggtgtccgtgggcacc
gccatgattccgttcctcgagcatgacgacgccaaccgtgccctcatgggtgcgaacatg
cagaagcaggccgttccgctggtccgcgccgaggccccctacgtgggcaccggcatggag
aagcgtgcggcctacgacgccggcgacatggtcatcaccccgaaggccggcgtcgtggag
aacgtctccgccgacgtgatcaccatcatggacgacgagggcatccgcgacacttacatg
ctgcgcaagttcgagcgcaccaaccagggcacctgctacaaccagaccccgctggtcaac
atcggcgaccgagtcgaggccggccaggttctggccgacggccccggcaccttcaacggt
gagatgtccctcggccgcaacctgctggtcgcgttcatgccgtgggagggccacaactac
gaggacgcgatcatcctcaaccagagcatcgtggagcaggacatcctcacctcgatccac
atcgaggagcacgagatcgacgcccgcgacaccaagctcggtgcagaggagatcacccgg
gagatcccgaacgtctccgaggacgtgctccgcgacctcgacgaccgcggcatcgtccgc
atcggtgccgacgtccgcgccggcgacatcctcgtcggcaaggtcaccccgaagggcgag
accgagctgaccccggaggagcgcctcctgcgcgccatcttcggtgagaaggcccgcgag
gtccgcgacacctccatgaaggtgccgcacggcgagaacggcaaggtcatcggcgtgcgt
cgcttctcccgcgaggacgacgacgatctggccccgggcgtcaacgagatgatccgcgtc
tacgtcgcccagaagcgcaaggtccaggacggcgacaagctcgccggccgccacggcaac
aagggcgtcgtcggcaagatcctcccgccggaggacatgccgttcatggcggacggcacc
cccgtcgacatcatcctcaacacccacggtgtcccgcgtcgtatgaacatcggccaggtc
ctggagatccacctcggctggctcgccgccgccggctggtccgtggacccggaggacccg
agcaacgccgagctcatctccaccctcccggaggagctctacgacgtccccgccggctcg
ctcaccgccaccccggtgttcgacggtgcctccaacgaggaactctccggcctgctgcgt
aactcccggccgaaccgcgacggcgacgtcatggtcaacgagaacggcaaggcgcagctg
ctcgacggccgctccggtgagcccttcccgtacccggtctccgtgggctacatgtacatg
ctcaagctgcaccacctggtggacgagaagatccacgcccgttccaccggaccgtactcc
atgatcacccagcagccgctcggcggtaaggcccagttcggtggccagcgcttcggtgag
atggaggtgtgggcgatgcaggcctacggcgccgcctacaccctgcaggaactgctgacc
atcaagtcggacgacgtcgtcggccgcgtgaaggtctacgaggcgatcgtcaagggcgag
aacatccccgacccgggcatcccggagtccttcaaggtcctcctcaaggagctccagtcg
ctgtgtctcaacgtggaggtcctctccgccgacggcaccccgatggaactgaccacggac
gacgacgacgagctcgactccgccggttcctcgctgggcatcaacctctcccacgacgag
cggtccgacgccgacgcgatgtag
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