Corynebacterium suedekumii: QP029_05790
Help
Entry
QP029_05790 CDS
T09531
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
csue
Corynebacterium suedekumii
Pathway
csue03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csue00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QP029_05790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csue03021
]
QP029_05790
03400 DNA repair and recombination proteins [BR:
csue03400
]
QP029_05790
Enzymes [BR:
csue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QP029_05790
Transcription machinery [BR:
csue03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QP029_05790
DNA repair and recombination proteins [BR:
csue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QP029_05790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WIM71287
LinkDB
All DBs
Position
1160004..1164014
Genome browser
AA seq
1336 aa
AA seq
DB search
MFDVNLFEELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDDEARHNDLTTLEADMLLEKKDVEADVESEIAERAAKLEED
LAELEAAGAKADARRKVQNAADKEMQHIRERGEREVDRLEEIWQTFVKLAPKQMIIDETV
YEELVDRYEEYFTGGMGAEAIQTLIRNFDLDAEAEILRTVINEGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYFLTMHKGEDEIGGQ
GAYRPADDNGPAQGVYSSVAEAIMARDLGVLGLQAPIHVRISHLRPPAQIEEEQFPDGWE
QGQTWLAETTLGRVMFNELLPWNYPYLEGVMVRKGGGAGNILLGDVINDLAATYPMITVA
QTMDKMKDAGFYWATRSGVTIAMSDVLVLPNKEEILERYETEAKEIEHKYWVKGALRERD
RYDRLVELWQDATNQVGKAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRED
DCGTRQGVRVPVAVEVKDADGTVTGYARDTLVETSVSGRVLATEVNGADGEQLFAAGDDL
TEARIDELVLNGVTEVKVRSVLTCQTPTGVCAKCYGKSMASGHLVDIGEAVGIVAAQSIG
EPGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNASPIAEFSGTVRLEDDGNFYKL
TLTSDDGSEEKVYEKLSKRQGLAQIRVPMENNPTVSIERTLRDGDHVELGDRLLRGPADP
HDVLRVLRRRGVEKHLIDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIEAGSTEFLPG
TLVDLSEARRVNAAIRAEGGQPAELRDQIMGITKASLATESWLSAASFQETTRVLTDAAI
NRRSDQLIGLKENVIIGKLIPAGTGISRYRNITVKPTEAARNAAYSIPTYGDSIYGDDGY
AEFTGASVPLDEDFQL
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacgtaaacctcttcgaggaactccgcatcggcctggccaccgccgacgacatc
cgccgttggtccaagggcgaggtcaagaagccggagaccatcaactaccgcaccctcaag
ccggagaaggacggcctcttctgcgagcgcatcttcggccccacccgcgactgggagtgt
gcctgcggcaagtacaagcgcgtccgctacaagggcatcatctgtgagcgctgtggcgtc
gaggtgaccaagtccaaggtgcgccgcgagcgcatgggccacatcgagctcgccgcaccg
gtcacccacatctggtacttcaagggtgtcccgtcccgtctcggctacctgctcgacctg
gcgccgaaggatctcgagcggatcatctacttcgccgccaacatcatcacctccgtcgac
gacgaggcacgccacaacgacctgaccaccctcgaggccgacatgctcctcgagaagaag
gacgtcgaggccgacgtcgagtccgagatcgccgagcgcgccgccaagctcgaggaggac
ctcgccgagctcgaggccgccggtgccaaggccgacgcccgccgcaaggtgcagaacgcc
gccgacaaggagatgcagcacatccgcgaacgcggtgagcgcgaggtcgaccgcctagag
gagatctggcagaccttcgtcaagctcgccccgaagcagatgatcatcgacgagaccgtc
tacgaggaactcgtcgaccgctacgaggagtacttcaccggcggcatgggcgccgaggcg
atccagacgctgatccgcaacttcgacctcgacgccgaggccgagatcctgcgcaccgtc
atcaacgagggcaagggccagaagaagatgcgcgccctcaagcgcctcaaggtcgtcgcc
gcgttccagcgctccggcaacgacccggccggcatggtcctcgactgcatcccggtgatc
ccgccggagctgcgcccgatggtccagctcgacggtggccgcttcgccacctccgacctc
aacgacctctaccgtcgcgtgatcaaccgcaacaaccgcctcaagcgcatgatcgacctc
ggcgcccccgaaatcatcgtgaacaacgagaagcgcatgctgcaggagtccgtcgacgcc
ctcttcgacaacggccgtcgcggccgcccggtcaccggaccgggcaaccgtccgctgaag
tccctgtctgacctgctcaagggcaagcagggccgcttccgccagaacctgctgggcaaa
cgcgtcgactactccggccgttccgtcatcatcgtcggcccgcagctcaagctccacgag
tgcggcctgcccaagctcatggccctcgagctgttcaagccgttcgtgatgaagcgcctc
gtggagaacgactacgcgcagaacatcaagtccgccaagcgcatggtcgagcgtcagcgc
cccgaggtgtgggacgtgctcgaggaggccatctccgagcacccggtcatgctcaaccgt
gcccccaccctgcaccgcctgggtatccaggcgttcgagccgaagctcgtcgagggtaag
gccatccagctgcacccgctcgcctgtgaggccttcaacgccgacttcgacggcgaccag
atggcggtccacctgccgctgtccgccgaggcacaggccgaggcccgtgtcctcatgctc
gcctccaacaacatcctctccccggcatccggcaagccgctggccatgccgcgcctcgac
atggtcacgggtctgtacttcctcaccatgcacaagggcgaggacgagatcggtggccag
ggcgcctaccggccggccgacgacaacggcccggcccagggcgtctactcctccgtcgcg
gaagccatcatggcccgcgacctcggggtcctcggcctccaggcacccatccacgtccgc
atctcccacctgcgcccgccggcccagatcgaggaggagcagttccccgacggatgggag
cagggccagacctggctcgccgagaccaccctcggccgcgtcatgttcaacgagctgctg
ccgtggaactacccgtacctcgagggcgtcatggtccgtaaggggggcggcgccggcaac
atcctgctcggcgacgtcatcaacgacctcgcggccacctacccgatgatcaccgtcgcc
cagacgatggacaagatgaaggacgccggcttctactgggccacccgttccggtgtcacc
atcgccatgtccgacgtcctcgtcctccccaacaaggaggagatcctcgagcgttacgag
accgaggccaaggagatcgagcacaagtactgggtcaagggtgcgctgcgtgagcgcgac
cgctacgaccgcctcgtcgaactctggcaggacgccaccaaccaggtgggtaaggccgtc
gaggacctgtacccggacgacaacccgatcccgatgatcgtgaagtcgggtgccgccggc
aacatgcgtcagatctggaccctggccggcatgaagggcatggtcgtgaactccaagggt
gactacatcacccgaccgatcaagacctccttccgtgagggcctgtcggtcctggagtac
ttcaacaactcccacggttcccgtaagggcctggccgacaccgccctgcgtaccgccgac
tccggctacctcacccgtcgactcgtcgacgtggcccaggacgtcatcgtccgcgaggac
gactgcggcacccgccagggtgtgcgcgtccccgtcgccgtcgaggtcaaggacgccgac
ggcacggtcaccgggtacgcccgcgacaccctcgtcgagacctccgtgtccggccgcgtg
ctggccaccgaggtcaacggtgccgacggtgagcagctgttcgccgccggcgacgacctc
accgaggcgcgtatcgacgagctcgtgctcaacggtgtcaccgaggtcaaggtccgctcc
gtgctcacctgccagaccccgaccggtgtctgcgccaagtgctacggcaagtccatggcc
tccggccacctcgtcgacatcggcgaggccgtcggcatcgtcgccgcccagtccatcggc
gagcccggcacccagctgaccatgcgtaccttccaccagggtggtgtcggtggcgacatc
accggcggtctgccccgcgtccaggagctgttcgaggcccgcgtgcccaagaacgcctcc
ccgatcgccgagttctccggcaccgtccgactcgaggacgacggcaacttctacaagttg
acgctcacctccgacgacggctccgaggagaaggtctacgagaagctgtccaagcgacag
ggtctcgcccagatccgcgtccccatggagaacaaccccaccgtgtccatcgagcgcacc
ctgcgcgacggtgaccacgtggagctcggcgaccgcctgctgcgcggtcccgccgacccg
cacgatgtgctgcgcgtgctgcgccgacgcggcgtcgagaagcacctcatcgacgaagtc
caggccgtctaccgtgcccagggcgtggcgatccacgacaagcacatcgagatcatcatc
cgccagatgctgcgccgcggcaccgtcatcgaggccggttcgaccgagttcctgccgggc
accctcgtcgacctgtccgaggcacgtcgcgtcaacgccgcgatccgcgccgagggtggc
cagcccgccgaactgcgcgaccagatcatgggcatcaccaaggcctccctggccaccgag
tcctggctgtccgccgcgtcgttccaggagaccacccgtgtcctcaccgacgctgcgatc
aaccgccgctccgaccagctcatcggcctcaaggagaacgtgatcatcggtaagctgatc
ccggccggcaccggaatctcccgctaccgcaacatcacggtcaagcccaccgaggcagcc
cgcaacgccgcctactcgatccccacctacggggactcgatctacggcgacgacggctac
gccgaattcaccggcgcctccgtgccgctggacgaggacttccagctctaa
DBGET
integrated database retrieval system
