Corynebacterium suedekumii: QP029_07990
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Entry
QP029_07990 CDS
T09531
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
csue
Corynebacterium suedekumii
Pathway
csue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QP029_07990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csue03019
]
QP029_07990
03400 DNA repair and recombination proteins [BR:
csue03400
]
QP029_07990
Enzymes [BR:
csue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QP029_07990
Messenger RNA biogenesis [BR:
csue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QP029_07990
DNA repair and recombination proteins [BR:
csue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QP029_07990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
HTH_Cmi2_C
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
WIM69223
LinkDB
All DBs
Position
1590112..1592178
Genome browser
AA seq
688 aa
AA seq
DB search
MQATRDTANDLLTGIAGEGARLRDDQWTAIDALVNHRKRMLVVQRTGWGKSAVYFIAAKL
LRQAGRGPSLIISPLLALMRNQVAAAQGAGIRAVTLNSANMTEWEEIQASVIGGDVDVLL
ISPERLNNPGFRDEVLPHIARAVGMVVVDEAHCISDWGHDFRPDYRRIRTLLAELPTGVP
VLATTATANDRVVADVQAQLGEDTGLLRGGLDRESLHLSVVRLTDTTQRPAWLAGHLSQL
EGSGIIYCLTVSAAEDLAEAMEAAGWNVAAYTGRTEAGERERLEQALIGNELKALVATSA
LGMGFDKPDLGFVVHVGAPSSPVSYYQQIGRAGRGTDRADVILLPGAEDRDIWRYFASVS
FPEESTVRQLLAALTDEPQSTMKLETQVDLSRSRLDQVLKVLDVDGAVRRVRGGWVATGQ
PWSYDAERYAGLAHARTAEQEAMLDYERTDGCRLLFLRSQLDDATATEPCGRCDNCTGRR
WGTDIDAAVAARVDSRLTAPGVRLTQRRQWPTGISVKGRIHGVEPGRALGRLNDIARGPA
LRELLDNRDWRPSHPWQQDTWLPRIVAVLSDWDWAQRPTTVVALGSHDPAATAQVSALAE
AMAGVGRMTFAGTLPVRAGAGEVTAQNSAYRVMGLLDRWEMEALTPVDGPVLLVTDVVDT
GWSVTVAGQQLAERTGQPVLPFALASRG
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacacgggacacggccaatgacctcctcaccggaatagcgggggagggggca
cgcttacgcgatgaccagtggacggcgatcgatgcgctggtcaatcaccggaagcgcatg
ctcgtggtccagcgcaccggctggggcaagtccgcggtgtacttcatcgccgccaaactc
ctgcgccaggccggccgggggccgtcgttgatcatctccccgttgctggcactcatgcgt
aaccaggtcgccgccgcacagggggcggggatcagggcggtcaccctcaacagcgcgaac
atgaccgagtgggaggagatccaggccagcgtcatcggcggtgacgtggatgtcctgctc
atctccccggaacggctgaacaacccgggcttccgcgatgaagtcctcccgcacatcgcc
cgggcggtggggatggtcgtcgtcgatgaggcacactgcatctccgactggggccacgat
ttccggccggactaccggcgcatccgcaccctgctcgcggaactgcccaccggggtgccg
gtgctggccaccaccgccaccgccaacgaccgggtggtcgccgacgtgcaggcacagctg
ggggaggacaccggcctgctccgcggcgggctggaccgggagtcgctgcacctgtcggtg
gtccggttgacggacaccacccagcgccccgcgtggctggccggccatctcagccagctg
gagggctccggcatcatctactgcctcaccgtctccgcggcagaggacctcgcggaggct
atggaggccgccggatggaacgtggccgcctacaccggacggaccgaggcgggggagcgg
gaacggctcgagcaggcactgatcggcaacgaactcaaggccctggtggccacctccgcg
ctgggcatgggcttcgacaaacccgacctcggtttcgtcgtccacgtcggcgcgccgagc
tccccggtgtcctactaccagcagatcggtcgcgccggccgcggcaccgaccgggcagac
gtcatccttctgccgggtgcggaggaccgggacatctggcgctacttcgcctccgtctcc
ttcccggaggagtcgacggtccgccagctcctcgccgcgttgacggatgagccgcagtcg
acgatgaagctggagacccaggtcgacctcagccgctcccgcctcgaccaggtgctcaag
gtcctcgacgtcgacggcgccgtccggcgggtccggggcggatgggtggccaccggccag
ccctggtcctatgacgcggaacgctacgccgggctcgcccatgcccgcacggctgaacag
gaggccatgctggactacgagcgcaccgacggatgccgcctgctgttcctccggagccag
ctcgacgacgccaccgccaccgagccgtgcgggcgctgcgacaactgcacgggcaggcgg
tggggcacagacatcgacgcggcggtcgccgcccgggtcgactcccgcctcaccgctccc
ggtgtgcgtctgacccagcgcaggcagtggccgaccgggatcagcgtcaaggggaggatt
cacggtgttgaacccggccgcgcactggggcggctcaacgacatcgcccggggacccgcc
ctccgcgagctcctggacaaccgggactggcggccgagccacccgtggcagcaggacacc
tggctgcccaggatcgtggcggtgctctccgactgggactgggcgcaacgccccaccacg
gtggtggccctgggctcccatgatccggcggccactgcgcaggtgagcgccctggcggaa
gccatggccggcgtcggtcggatgaccttcgccgggaccctgccggtacgcgccggggcc
ggcgaggtcaccgcccagaactccgcctaccgggtgatgggcctgcttgaccgctgggag
atggaagccctcacgcccgtcgacggcccggtcctcctggtcaccgatgtggtggacacc
ggctggtccgtcaccgtcgccgggcagcagttggcggagcggaccggccagccggtccta
cccttcgcactggcctcgcggggttag
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