Chlamydia suis: Chls_632
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Entry
Chls_632 CDS
T07130
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
csui
Chlamydia suis
Pathway
csui03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csui00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Chls_632 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csui03021
]
Chls_632 (rpoC)
03400 DNA repair and recombination proteins [BR:
csui03400
]
Chls_632 (rpoC)
Enzymes [BR:
csui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Chls_632 (rpoC)
Transcription machinery [BR:
csui03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Chls_632 (rpoC)
DNA repair and recombination proteins [BR:
csui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Chls_632 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QHP83507
LinkDB
All DBs
Position
complement(723073..727263)
Genome browser
AA seq
1396 aa
AA seq
DB search
MFREGSRDDAALVKEGLFDKLEIGIASDVTIRDKWSCGEIKKPETINYRTFKPEKGGLFC
EKIFGPTKDWECYCGKYKKIKHKGIVCDRCGVEVTLSKVRRERMAHIELAVPIVHIWFFK
TTPSRIGNVLGMTASDLERVIYYEEYVVIDPGNTDLVKKQLLNDAKYREVVEKWGKDAFV
AKMGGEAVYDLLKSEDLESLLGELKDRLRKTKSQQARMKLAKRLKIVEGFVSSSNRPEWM
VLKNIPVVPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKAILRLKTPEVIVRNEKR
MLQEAVDALFDNGRHGHPVMGAGNRPLKSLSEMLKGKNGRFRQNLLGKRVDYSGRSVIIV
GPELKFNQCGLPKEMALELFEPFIIKRLKDQGSVYTIRSAKKMIQRGAPEVWDVLEEIIK
GHPVLLNRAPTLHRLGIQAFEPVLIEGKAIRVHPLVCAAFNADFDGDQMAVHVPLSIEAQ
LEAKVLMMAPDNIFLPSSGKPVATPSKDMTLGIYYLMADPTYFPEEHGGKTKVFKDEIEV
LRALNAGGFILKDEICGSRRDETGRGIHIHEKIKVRIDGQIIETTPGRVFFNTIVPKELG
FQNYSMPSKRISELILQCYKKVGLEATVRFLDDLKELGFTQSTKAAISMGLKDVKIPEIK
KEILKDAYEKVAIVKKQYEDGIITDGERHSKTISIWTEVSDLLSNALYAEIRKQTNSKHN
PLFLMIDSGARGNKSQLKQLGALRGLMAKPNGAIIESPITSNFREGLTVLEYSISSHGAR
KGLADTALKTADSGYLTRRLVDVAQDVIITEKDCGTLNHIEVSTIRQGSEELLPLKDRIY
GRTVSENVYQPGDKSNVLAYAGDVLTSSQAEAIDDAGIERVKIRSTLTCESRRGVCAKCY
GLNLANGRLIGLGEAVGIIAAQSIGEPGTQLTMRTFHLGGIAATSSTPEIVAECDGILVY
LDLRVVVDQEGNSLVLNKMGALHLVRDEGRSLSEYKKLLSTKSIESLATFPVELGAKILV
NDGAAVTAGQRIAEVELHNIPIICDKPGFVHYEDLVEGVSTEKVTNKNTGLVELIVKQHR
GELHPQIAIYADVNMKELVGTYAIPSGAIISVEEGQRIAPGMLLARLPRGAIKTKDITGG
LPRVAELVEARKPEDAADIAKIDGVVDFKGIQKNKRILVVRDEITGMEEEHLISLTKHLI
VQRGDNVIKGQQLTDGLVVPHEILEICGVRELQKYLVNEVQEVYRLQGVDINDKHIEIIV
RQMLQKVRITDPGDTTLLFGEDVDKKEFYEENRRTEEDGGKPAQAVPVLLGITKASLGTE
SFISAASFQDTTRVLTDAACSSKTDYLLGFKENVIMGHMIPGGTGFDTHKRIKQHLEKEQ
EDLVFDFDSEFESVVG
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgttcagagaaggttctcgagacgatgcagccttggtaaaagaaggtttgtttgataag
ttagaaattgggattgcttcagatgtgactattcgcgacaagtggtcttgtggcgaaatt
aagaaaccagagacgatcaattaccgcacgtttaaacctgaaaaaggggggctgttttgt
gaaaaaatctttggcccaaccaaagactgggaatgttattgcggtaaatacaagaaaatc
aaacataaagggattgtgtgtgatcgctgtggggtagaagttacactttctaaggtgcga
cgagaaagaatggcacatatcgagttggctgttcctattgttcatatatggtttttcaaa
acaaccccatctagaatcggaaacgttttagggatgactgcttcagatttggagcgcgta
atctattacgaagaatatgtcgtcattgatccaggtaatacagacttggtgaaaaaacaa
cttcttaacgatgcaaaatatcgagaagtagttgagaaatggggtaaagatgcttttgtt
gccaaaatgggaggggaggctgtttacgatcttctgaaatcagaagacttagaaagtctt
ctgggagagcttaaagatcgcttgagaaaaaccaagtctcagcaagcaaggatgaaactt
gctaagcgtttaaaaatcgtggaagggtttgtatcttcttcgaaccggccagagtggatg
gtcttgaaaaatattcctgtcgtacccccggatcttcgtcctttggttcctttagatggt
gggcggtttgcgacttctgatctgaacgatttgtaccgtagagttattaatcgaaataat
cgtttgaaggctattttacgattaaaaactccagaggtaattgttcgtaacgagaaacga
atgttacaagaggctgttgatgccttgtttgacaatgggcgtcatgggcatcctgttatg
ggggctggaaataggcctcttaagtccttatcagagatgttaaagggtaaaaatggtcgt
ttccgacaaaatctattagggaaacgagtggattattccggtcgttccgtaattattgtt
ggtccagagttgaagtttaatcaatgcggattgcctaaagagatggcgttagagctgttt
gagccgtttattatcaagcgcttaaaagatcagggtagcgtttataccattcgttcggca
aaaaaaatgattcaacgaggagctcctgaagtttgggatgtccttgaagaaattattaag
ggacatccggttctgctgaaccgagctcctactttgcaccgattaggaatacaggctttt
gagccggtattgattgagggcaaagctattcgagttcatccattggtgtgtgctgcgttt
aacgcggactttgacggagaccaaatggctgttcacgtaccgctttccatcgaagctcag
ttagaagctaaagttttgatgatggctccagataatattttcttgccatcatcagggaaa
cctgttgcaacgccttctaaggacatgacattagggatttattacttgatggcggatccg
acttatttcccagaagagcatggaggaaaaactaaggtatttaaagatgagatagaagta
cttagagccttgaatgccggaggctttattcttaaggatgagatatgtggttctcgtcga
gatgaaacagggcggggaattcatattcatgaaaaaattaaagttcgaattgatggtcaa
attattgaaactacacccggtcgtgtatttttcaatactattgttcctaaagagctgggt
ttccaaaactacagcatgccaagtaaacgtatcagcgaattgattttacaatgctataag
aaagttggcttagaggccacggtgcgtttcctagatgatttgaaggaattaggtttcaca
cagtctacgaaggcggcgatttctatgggattgaaagatgttaaaatcccagagatcaag
aaagaaattttgaaagatgcctacgagaaagttgctatcgttaagaaacaatatgaagat
ggtattattaccgacggggaacgtcattctaagaccattagcatttggacagaggtttcc
gatcttctatcgaatgctttatatgcagaaattaggaagcaaacgaatagtaagcataac
ccgttattcctaatgattgattctggagcacgaggaaacaaatctcagttgaaacagtta
ggagctttgcgagggttaatggctaaacctaatggagccattattgaatctccaattact
tctaactttcgagaaggtttaactgtgctcgagtattctatttcttctcacggagcaaga
aaaggattagcggacacagctcttaagaccgcagattctgggtatttgactcgtcgttta
gtggatgttgctcaagatgttattattaccgaaaaagattgcggcactcttaatcacatt
gaagtgtcgactattcgtcaaggttctgaagagctgttgcctttgaaagatcgaatttat
ggacgaactgtttctgaaaacgtttatcaaccaggggacaaaagcaatgttttagcttat
gcaggggacgttttgacttcttctcaagctgaagccattgatgatgctggtattgaacgc
gtgaagattcgctctacgctcacttgtgagagccgtcgaggagtctgtgctaaatgttat
ggactgaaccttgccaatggccgtttaattggattaggagaagctgttggtattattgca
gcccaatccattggagagcctggaactcagttaaccatgagaacattccaccttggaggg
attgctgcaacatcctcaactccagagattgttgccgaatgtgacggaatcctcgtttat
ttagacttacgtgttgtggtagaccaagaaggaaatagccttgttctaaacaaaatggga
gctttgcacttagttcgagatgaaggtcgaagtttaagtgaatacaagaagcttttaagc
acgaagtctatcgagagcttggcaacattccctgtagaattgggagccaaaattttggtt
aatgatggggcagctgttactgccggacaaagaatcgcagaggttgagctgcataatatt
ccaattatctgtgataagccagggtttgttcattacgaagatctagtggaaggggtatcc
acagagaaggtcacgaacaagaacacgggacttgttgagttgatcgtgaaacagcatagg
ggagagctgcatcctcagattgctatatatgctgatgttaacatgaaggaattggtcggt
acgtatgccattccttccggagcaattatctctgttgaagaggggcaacgtattgctccg
ggaatgctattagcaagattgcctcgaggggcgatcaagacgaaggatattaccggtggt
ttacctagggttgcagagttggtagaagctcgtaagcctgaagatgctgcggatattgca
aaaattgatggagtcgtagactttaagggtattcagaagaacaagcgtatccttgtggtt
cgtgatgagatcactggtatggaagaggaacatcttatttctttgaccaaacacctgatt
gtgcaacgcggggataatgttatcaaaggtcaacaattaacagacggtttggttgttcct
cacgaaattcttgagatttgcggggttcgtgaattgcagaaatatctggttaacgaagtt
caagaagtgtaccgtttacagggtgtggacattaacgacaaacatattgaaatcattgtt
cgtcaaatgttgcaaaaagtacgtattactgatccgggtgatacaaccttgttgtttgga
gaggatgtagataagaaggagttttatgaagaaaaccgccgtacggaagaggatggagga
aaaccagcccaggcggttcctgtactgttaggaattactaaagcttctttgggaacagaa
tcctttatctctgcagcatcgttccaagacacaacacgggtcttaacggatgctgcttgc
agcagtaaaactgactatctgctaggattcaaagagaacgtgatcatgggacatatgatt
cctggtggtacaggatttgatacgcataagcgtattaagcaacatcttgagaaagaacaa
gaagacttggtctttgattttgatagtgagttcgagtctgtagtgggctaa
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integrated database retrieval system
