Capricornis sumatraensis (Sumatran serow): 138069819
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Entry
138069819 CDS
T10522
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138069819 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csum03041
]
138069819 (DHX16)
Enzymes [BR:
csum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138069819 (DHX16)
Spliceosome [BR:
csum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
138069819 (DHX16)
Complex C
U4/U6.U5 tri-SnRNP related factors
138069819 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_30
SecA_DEAD
Flavi_DEAD
nSTAND3
Cas3-like_C_2
SRP54
Motif
Other DBs
NCBI-GeneID:
138069819
NCBI-ProteinID:
XP_068817275
LinkDB
All DBs
Position
22:32037506..32049560
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AA seq
1045 aa
AA seq
DB search
MATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRDTDTLDLSGPAR
DFALRLWNKVPRKAVVEKPARAAEREARALLEKNRSYMLLEDSEESSEETVGRAGSSVQK
KRKKRKHLRKKREEEEEDDEEEQVSEKGKRKTGEKKKQTEKPESEDEWERTERERLQDLE
ERDAFAERVRRRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLA
KREREKLEDLEAELADEEFLFGDVELSRHERRELRYKRRVRDLAREYRAAGEQEKLEATN
RYHMPEETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLV
LEEEETIEFVRATQLQGDEEPSPPPAPTQAQQKESIQAVRRSLPVFPFREELLAAIANHQ
VLIIEGETGSGKTTQVPQYLFEEGYTRKGMKIACTQPRRVAAMSVAARVAREMGVKLGNE
VGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLI
KDVARFRPELKVLVASATLDTARFSTFFDDAPIFRIPGRRFPVDIFYTKAPEADYLEACV
VSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQ
ARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK
ASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLM
HFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSC
SEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQ
WCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTR
SGYRTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY
KAKELEDPHAKKMPKKIGKTREELG
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaccggcggggctggagcgctgggtgcaagacgagctgcactcggtactggga
ctgagcgagcggcacgtggcccagttcttgatcggtaccgcgcagcgctgtgcctcggca
gaggagttcgtgcagcgcttgcgagacaccgataccctggacctcagtgggccggcccgg
gacttcgccctgagactctggaacaaggtcccacggaaggcagtggtggaaaagccagct
cgggcagccgagcgagaggcccgagccctgctggaaaagaaccgctcttatatgttgttg
gaggacagtgaggagagcagcgaggagactgtgggcagggctgggagcagtgtccagaag
aagcggaaaaaacggaaacacctcaggaagaaacgtgaggaggaagaggaagacgacgag
gaggaacaagtttctgagaaaggaaagaggaagacaggggagaagaaaaagcagacagaa
aagccggagtcggaggatgagtgggagcggacagagcgagagcgccttcaggacctggag
gaacgcgatgcattcgctgagcgggttcggcggcgggacaaggatcggactcgcaatgtc
ctggagcggtcagacaagaaggcttacgaagaggctcagaagcgcctcaagatggctgag
gaagaccggaaagccatggtccctgagctgaggaagaaatcccgccgagagtacctggcc
aagcgggagcgagagaagctggaagacctggaggccgagctggcggacgaggagttcctc
ttcggggacgtggagctgagccgacacgagcgccgggagctcaggtacaagcggcgtgtg
cgggatctggcccgggagtaccgggcggctggggagcaggagaagctggaggccaccaat
cgctaccacatgcccgaggagacccgaggacagcctgcacgcgcggtagatctagtggag
gaggagtccggcgcccctggggaggagcagcggcgctgggaggaggcccggctcggggca
gcatccctgaagtttggggcccgagatgctgcctcccaggagcccaagtatcagctggtg
ctggaggaggaggagaccattgagtttgtccgggccactcagctccagggcgatgaggag
ccgtcgcccccgcccgcccccactcaggcccagcagaaggagtccatccaggccgtgcgc
cgcagccttcctgtgttcccgttccgcgaggagctcctggccgctattgcgaaccatcag
gtcctcatcatcgaaggcgagacgggctccggcaagaccacccaggtcccacagtacctc
tttgaggagggttacacaaggaagggtatgaagatcgcctgtacccagccccggcgagtg
gcagccatgagtgtggctgcccgagtggcccgggagatgggtgtgaagcttggcaatgag
gtcggctacagcatccgcttcgaggactgcacgtcagagcgaaccgtcctgcgctacatg
acggatgggatgcttctccgggagttcctctctgagcctgaccttgcgagttacagcgtg
gtgatggtggatgaggcccacgaacggaccctgcacacagacattctctttggcttgatc
aaggatgttgcgcggttccgacctgagctcaaggtcctggtggcttcagccacactggac
acggcccgcttttccaccttcttcgatgacgcccccatcttccgaatccctggacgcagg
tttccagttgacatcttctacaccaaggctccggaggcggactacctggaggcctgtgtg
gtgtccgtgctgcagatccacgtgactcagccccccggggacatcctagtgttcctgaca
ggacaggaggagatcgaggctgcctgcgagatgctccaggatcgctgccgccgcctgggc
tccaagatccgggagctcctggtgctgcccatttatgccaacctgccttctgacatgcag
gcgcggatcttccagcccacgcccccaggggcacggaaggtggttgtggcaaccaatatt
gctgagacctcgctcaccattgagggcatcatttacgtgctggatccagggttctgtaag
cagaagagctacaacccccgcacaggcatggaatcgctcactgtcacaccctgcagcaag
gcctctgccaatcagcgagctggccgggcgggtcgggtggctgcagggaagtgcttccgc
ctgtatactgcctgggcttaccagcacgagctggaggaaaccacggtgcccgagattcag
aggaccagcctgggcaatgtcgtgttgctgctcaagagcttagggatccatgacctaatg
cactttgatttcctggacccgccgccatatgagaccctgctgctggctctggagcagctc
tatgcgctaggagccctcaaccaccttggggagctcaccacgtctggtcgaaagatggca
gagctgcctgtggaccccatgctgtctaaaatgatcctggcctctgagaagtacagctgt
tcagaggagatcctgacagtggctgccatgctctctgtcaacaactccatcttctaccga
cctaaggacaaggtcgtccatgctgacaatgctcgggtcaacttcttcctccctggtggg
gaccacctggttctgctgaatgtttatacacagtgggctgagagtggttactcttcccag
tggtgctatgagaactttgttcagttcagatccatgcgccgagcccgggatgtgcgggag
cagctggaagggctcttggaacgtgtggaagttggtctcagttcctgccaaggggactac
atccgtgtccgaaaggccatcactgctggctacttctaccacacagcacggttgactcgc
agcggctaccgcacagtcaaacagcagcagacagtgttcattcatcccaactcttccctc
tttgaggaacagccacgctggctgctctaccatgaacttgtcttgaccaccaaagagttc
atgagacaggtattggagattgagagcagttggcttctcgaagtggcgccccactattac
aaggccaaggagttagaagatccccatgctaagaaaatgcccaaaaaaataggcaagaca
cgggaagagctagggtga
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