Capricornis sumatraensis (Sumatran serow): 138070272
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Entry
138070272 CDS
T10522
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
csum Capricornis sumatraensis (Sumatran serow)
Brite
Ribosome biogenesis [BR:
csum03009
]
Eukaryotic type
90S particles
Other 90S particles
138070272 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138070272
NCBI-ProteinID:
XP_068817530
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Position
23:24326240..24368698
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AA seq
1874 aa
AA seq
DB search
MAAMEESFPRGGTRKTHKSEKAFQQSVEQDNLFDISTEEESTKRKKTQKGPAKTKKVKFE
TKESSKFVREKFEILNVESLCEGMRILGCVKEVNELELVISLPNGLQGCVQVTEICDAYT
EKLNEQVAQEEPLQDLVGLPELFSPGMLVRCVVSSLDTTKWGKKNVMLSLNPKNVNRVLS
AETLKPGMLLTGTVSSLEDHGYLVDIGVSGARAFLPLQKAQEYIRQKNKGARLKVGQYLN
CLIEEVKGSGGVVTLSIGHSEVSSAIATEEQSWTLNSLLPGLVVKAQVQKVTPLGLTLKF
LSFFSGLVDFMHLDPKRAGTYFSNQQVRACVLCVHPRTRAVRLSLRPVFLQPGRPLTRLL
CQQLGAVLDDVPVQGFFGNAGATFKLKDGALAYARRNHLSNSKKTFKPEAFKPGNTHKCR
IIDYSQMDELALLSLRTSIIEAQFLWYHDIKPGALVKGKVLTIKPHGMVVKMGKQIRGLV
PTMHLADILIKNPEKKYHVGDEVKCRVLLCDPKAKKLMMTLKKTLVESKLPAITCYDDAK
PGLQTHGFILRVKDYGCIVKFYNDVQGLVPRHELSAEYVPDPESVFYTGQVVKVAVLNCE
PSKERMLLSFRLLSDPKQECEGQSQKKKKAVSAGQLVDVKVLEKTKDGLKVAVLPHNIPG
FLPTAHLSDHVTNGPLLYHWLQTGDTLHRVLCLSTSEERVLLCRKPALVSAVEGGQNPKS
FSEIHPGMLLIGFVKNIKDYGVFVQFPSGLSGLAPKAILSDKFVTSTSDHFVEGQTVVAK
VTNVDEEKQRMLLSLRLSDCTLGDLATTSLLLLSQCLEERQGVRSLMSNRDSVLIQTLAE
MTPGMALDLEVQEVLEDGSVLFSEGPVPGLVLRASKYHRAGQELEPGQKKKAVILNIDML
KLEVHVSLCHDLVNRKAKKLKKGSDLQAIVQHLEESFAVASLVETGHLAAFSLTSHLNDT
FRFDSEKLQVGQGVSLTLQTTEPGVTGLLLAVEGPAAKRTMRQTRKDSETVDEDEEVDPA
LVIRTVKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPVGTSPTAKL
KVGKKVTARVIGGRDMKTFKFLPISHPRFIRTIPELSVRPSELKEDGHTALNTHSVSPLE
KIKQYQAGQTVTCFLKKYNMVKKWLEVEIAPDVRGRIPLLLTSLSFKVLKHPDKKFQIGQ
ALKATVVGPADSSKAFLSLSLIGPHKLKKGEVAMGRVVKVTPKEGLTVSFPFGRVGRVSM
FHVSDSYSETRLEDFAPQQIVRCYVLSAASPVLTLSLRSSRTNPETKSKITDPEINSIKD
LEEGQLLRGFVKSVQPSGVLVGLGPSVTGLAQHPHVSQHNQSKNAPYDRHLPEGKLLTAK
VLRLNHQESLVELSLLPDATGKQDARSARLRQPPPKQEGRETEAVERNHEGKAKEKKQQK
QKEKRTGKGQEGAQPPCKEKKEPQKPQAKKLGKRPHPESSSEQEIGSKKQKKAVLSEEDD
SGVEVYYREGEEEAEEMSMLPKEKLTRPAEAPRLQLSSGFVWDVGLDTLTPALPPHGESS
DSEEDEKPEQATQKKKSKKERELEKQKAEKELSRIEEALMDPGRQPESAEDFDRLVLSSP
SSSLLWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQES
LTKVFERAVQYNEPLKVFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWVKYGAFLL
RRGKAEASHHVMQRALECLPKKEHVDVISKFAQLEFQLGDAERARAIFESTLSIYPKRTD
VWSVYIDMIIKHGSQKEARDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGSEKDVQAVKA
KALEYVEAKSAVVD
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggcagccatggaagaaagcttcccccgtgggggtacaagaaagacccacaaatcagag
aaagctttccagcaatcagttgaacaagacaacttatttgatatttctactgaagaggaa
tctaccaaaaggaaaaagacccagaaagggccagcaaaaacaaaaaaggtgaaatttgaa
accaaagaaagcagcaagtttgtcagagagaagtttgaaatccttaatgtggagtccctg
tgtgaggggatgcggattttgggttgcgtgaaagaggtaaatgaactggaactggtgatt
agtctccccaacggcctccaaggatgtgtgcaagtgactgaaatctgtgatgcttacact
gaaaagctgaatgagcaggtggcccaggaagagcccctgcaggacctggtcggcttgcct
gagctcttctcacctggaatgctggtgagatgtgtggtgagcagcctggataccacaaag
tggggcaaaaagaatgtcatgctttctctgaaccccaaaaatgtcaacagagtgctgagt
gctgagaccctgaaacctggcatgctgctcacgggcactgtgtccagcctggaagaccat
ggctacctagtggacattggtgttagtggggccagagcttttctgccactgcagaaagcc
caggagtacattcggcagaagaacaaaggtgctagactgaaggtgggtcagtacctgaac
tgcctcattgaggaggtgaagggcagtggaggagttgtcactctgtctattggtcactcg
gaagtttcttctgccattgctactgaggagcagagttggaccctcaatagtttgctacca
ggactggtggtcaaagcgcaggtacagaaggtgactccacttggccttacacttaaattc
ctctcgttcttcagtggcctggttgacttcatgcacctggatcctaagagagccggaaca
tatttctcaaatcagcaagtacgagcctgtgtcctctgcgtgcatcctcggaccagagct
gtgcggctgagcctgcgccctgtcttcctgcagcccgggcgcccactcacccggcttttg
tgccagcagctaggagctgtgctggatgatgtgcctgtccagggcttttttggcaatgct
ggggccacctttaagctgaaggatggtgctctggcctatgctcggcgcaaccatctctcc
aattctaagaaaactttcaaacctgaggccttcaagccagggaacactcacaagtgtaga
atcatcgactacagccaaatggatgagctggccttgctctctctgaggacgtctattatt
gaagctcagttcctttggtatcatgacatcaaacctggggctttggttaagggcaaagtg
ctgaccataaagccacacggaatggtggtgaagatgggcaagcagatcaggggcctggta
cctaccatgcacctggccgacatccttataaagaacccggagaagaaataccacgttggg
gatgaggtcaagtgccgggttttgctttgtgaccctaaagccaagaagctcatgatgacc
ctgaagaaaaccctggttgagtccaaacttcctgccatcacctgctatgatgatgccaag
cctggtctgcagacacacggctttatcctccgggtcaaggactacggctgcatcgtgaag
ttctacaatgacgtgcagggactggtgcccaggcacgagctcagtgccgagtacgtccct
gacccagagagtgtcttttacacgggccaggtggtgaaggtcgcggtgctgaactgtgag
ccgtccaaggagaggatgctcttatccttcaggctgttgagtgatccgaagcaagagtgt
gaaggacagagtcagaagaaaaagaaagccgttagtgctgggcagttggtggatgtgaag
gttttagagaagaccaaagacgggctgaaggtggctgtcctgccccacaacatccccggc
ttcctccccacggctcatctgtcggaccacgtcaccaacggcccactgttgtatcactgg
ctccagacaggcgacaccctgcaccgggtcctgtgtctgagcactagtgaggagcgtgtt
ctgctttgcaggaagccagccttggtctccgcagtagagggtggccagaatcccaagagc
ttctcagaaatccatcccggaatgctgctcattggttttgtgaagaacatcaaggactac
ggagtgttcgtccagttcccctcaggtcttagtggactggcccccaaagctatcttgagt
gacaagtttgtgacctccacaagtgaccactttgtcgaggggcagacggtggttgcgaag
gtgaccaacgtggacgaggagaagcagcggatgctgctgtcgctgcggctgtcggactgc
accctgggggacctggccacaaccagcctcctcctcctgagccagtgcctggaggagcgg
cagggcgtccggagcctcatgagcaaccgagactctgtgttgatccagactttggctgag
atgaccccggggatggcccttgacctggaggtgcaggaggtgttggaagacggttctgtg
ctgttcagtgagggccctgtgcctggcttggtcctgagagccagcaagtatcatcgggca
gggcaggagctggaacctgggcagaaaaagaaggctgtaatcttaaacattgatatgttg
aagttggaagtacatgtttccctctgccacgatttggtgaatagaaaagctaaaaagctg
aagaaaggcagtgacctccaggccattgtgcagcacttggaggagtcctttgccgtcgcc
tccttggtagaaactggccacctcgcagctttctccctgacctctcacctgaacgacacc
ttccgctttgactcagagaaattgcaggtggggcaaggcgtctccctaaccctccagacc
acagaaccaggagtgaccggtctccttttagccgttgaggggccagctgctaagaggacc
atgagacagacccggaaggactcagagacagtcgacgaggatgaggaagtggatccagct
ctggtcataaggactgtaaagaagcacaccctgtccattggggacatggtcacggggact
gtcaagtccattaagcctacccatgtggttgtgaccctggaagatggcatcattggctgc
atccatgcctcccacattctagatgatgttccagtgggcacatctcctacggccaagctg
aaagttgggaagaaagtcactgcccgagtgattggcgggagagacatgaagaccttcaag
tttctcccaataagtcatcccagatttatacgaaccatcccagagctgagtgttcggcca
agtgagctgaaggaggatggccatactgctctcaacactcactctgtaagccccttggag
aagattaaacagtatcaggctggtcagactgtgacttgcttcttgaagaagtacaacatg
gttaagaaatggctcgaggtggagattgctccagacgtccgagggagaattcccttgttg
cttacttctcttagcttcaaggttctgaaacatccagataagaagttccagattggccag
gccctgaaggccaccgtggttggcccagcagattcctccaaggccttcttgtctctttca
ctcataggtcctcacaagctcaagaagggggaagtggccatgggccgtgtggtgaaggtg
acgcccaaggaggggctgaccgtctccttcccctttgggagggttggaagagtcagcatg
tttcatgtgagtgactcctactcggagacgcgcctggaagacttcgccccacagcagatt
gtcaggtgttacgtcctgtccgctgcaagccctgtgttgactttgtcgctgagatcatcc
aggacgaacccagagacgaaaagcaaaataacagatccagagattaactccatcaaggac
cttgaggaagggcagctcttgaggggcttcgtcaagtccgtccagccgtccggcgtgctc
gtaggccttggcccctcagttacgggtttggcccaacacccgcacgtctcccagcacaac
cagtccaagaacgctccttatgacagacacctccctgaggggaagctgctcacagccaag
gtcctacgcctgaaccatcaggagagcctggtagagctgtcactcctccccgatgccact
ggaaagcaggacgcgcgttctgcccgcttgagacagccacctccaaagcaagaggggagg
gaaacggaggcagtggagagaaaccacgaaggaaaagcaaaggagaagaagcagcagaaa
cagaaagagaagagaactggcaaggggcaggagggggcgcagccaccttgcaaggagaag
aaggagccccagaagccccaggcaaagaagctgggcaagcggccgcaccccgagtccagc
agtgagcaggaaatcgggagcaagaagcagaagaaagctgtcctgtccgaggaggacgac
agtggtgtggaagtgtattaccgagaaggagaagaagaggcagaagagatgagcatgttg
cccaaggagaagctgaccaggccagcagaagcgccccggctgcagctatcttccggcttc
gtttgggacgtgggtctggacaccctgaccccagccttgccacctcacggagagagctcg
gacagtgaggaggacgagaagccagagcaagccacgcagaagaagaaaagcaagaaggag
agggagctggagaagcagaaggcggagaaggagctgtcccgcatcgaggaggcgctgatg
gatcctgggcgacagccggagtcggccgaggacttcgaccgactggtgctgagctcgccc
agcagctccctcctgtggctgcagtacatggccttccacctgcaggccacggagatcgag
aaggcccgggccgtggctgagagggcgctcaagaccatctccttcagagaggagcaggag
aagctgaacgtgtgggtggccctgctgaacctagaaaacatgtatggctcccaggagtcg
ctgaccaaggtcttcgagcgggccgtgcagtacaatgagcctctcaaggtctttctccac
ctggctgacatttacaccaagtcagagaaattccaggaagctggcgaactctacaaccgg
atgctgaagcgtttcaggcaggagaaagctgtctgggtcaaatacggcgccttccttctg
cggaggggaaaggcggaggccagtcaccatgtgatgcagcgagccctcgagtgcctgcct
aagaaagagcacgtggatgtgatttccaagtttgcacagcttgagttccagctaggggat
gcagaacgcgccagagccatttttgagagcacactgagcatctacccaaagcgcacagat
gtctggtcggtttacatcgacatgatcatcaagcacggcagccagaaggaagcccgggac
atcttcgagcgggtcattcacctgagcctggcccccaagcgaatgaaattcttcttcaag
cgctacctggactacgagaagcagcacggctcggagaaggacgtgcaggctgtcaaggcg
aaggccctggagtacgtggaggctaagagcgccgtggtggactag
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integrated database retrieval system
