Capricornis sumatraensis (Sumatran serow): 138070338
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Entry
138070338 CDS
T10522
Symbol
CSTF2T
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138070338 (CSTF2T)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csum03019
]
138070338 (CSTF2T)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
138070338 (CSTF2T)
U7-dependent histone pre-mRNA processing factors
138070338 (CSTF2T)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
138070338
NCBI-ProteinID:
XP_068817621
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Position
23:8411418..8413539
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AA seq
612 aa
AA seq
DB search
MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQTVSGPGPGLCPGPNVLLNQQNPPAPQPQHLARRP
VKDIPPLMQTPIQGGIPPQGPMPAAVPGPGPLTPGGTMQPQVGMPGVGPVPLERGQVQIS
DPRAPMPRGPMTAGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPMHHAA
GHDSRGPSSHEMRGGPLADPRMLMSEPRGPMIDQRGLPMDGRGSRDSRGMETRAMETEVL
ETRVMERRGMETCAMETRGMEARGMDARAMEMRGPGPSSRGPMTGGIQGPGPINMGAGGP
QGPRQVPNISGVGNPGPAMQGAGMQGGGMQGAGMQGAGMQGPGMQGAGMQGPGMQGAGMQ
GPGMQGAGKQGGAQPSSFSPGQSQVTPQDQEKAALIMQVLQLTADQIAMLPPEQRQSILI
LKEQIQKSTGTS
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttggcggtgagagacccggcaatggatcgatcactgcgttccgtgttcgtg
gggaacattccgtatgaggcgactgaggagcagttaaaggacattttctcggaggttggt
tctgttgtgagtttccggctggtatacgatagagagacgggcaaacctaagggttatggc
ttctgcgagtaccaagaccaggagaccgcacttagtgccatgcggaaccttaatgggcgg
gagttcagcgggagagcgcttcgggtggacaatgcagccagtgaaaagaacaaggaggag
ctaaagagcctagggcctgcagcgcctatcattgactcaccctacggggaccctatcgat
ccagaagatgctcctgagtcgattaccagagcagtcgctagtcttcccccggagcaaatg
tttgagctgatgaagcagatgaagctctgtgtccaaaacagccaccaggaagctcgaaat
atgttacttcaaaaccctcagctggcttatgcgctgttgcaggcacaagtagtgatgaga
atcatggatccagagattgctctgaaaattttgcatcgcaaaattcatgtaacaccactt
atcccagggaaatctcaaaccgtttctggccctggccctgggctttgtcctggacctaac
gttctgctgaaccagcaaaaccccccggcccctcagcctcagcatttggccagaagacct
gtgaaagacatccctcctctgatgcagacccctatccaaggtggaattccaccccaaggc
ccaatgccagccgcagttcctggccctggccccttaactcctggcggaacaatgcaaccc
caagttggaatgccaggggttggtcccgtgcccttagagcgggggcaggtgcagatatct
gatcccagagctcctatgcctcgtgggcccatgactgctggtggcctgcctcctcgagga
ctgttaggggatgctccaaatgacccacgtggagggactttgctttcagtcaccggagaa
gtggagcccagaggctatcttggcccaccacatcagggtcctccaatgcaccatgccgct
ggtcatgacagccggggcccttcctcacatgagatgaggggagggcccttagcagatcct
agaatgctcatgagtgagcccagaggacctatgatagatcaaagagggctgcctatggat
ggcagaggcagcagagactctcgagggatggagactcgagccatggaaacagaggtctta
gagacacgggtgatggagagaagaggaatggagacctgtgcaatggaaaccagaggaatg
gaagcgagaggaatggatgcaagagcaatggagatgaggggccccggccccagttcaaga
ggccctatgactgggggaattcagggtcctggtcctattaatatgggggcaggtggtcct
cagggacccagacaggttcccaacatttcaggggtgggaaaccctggacctgccatgcag
ggggcaggtatgcaaggaggtggcatgcaaggggcgggcatgcaaggagctggcatgcag
gggccgggcatgcaaggagcaggcatgcaggggccgggcatgcaaggagcgggcatgcag
gggccgggcatgcaaggagcaggcaagcaaggtggagcgcagcctagcagttttagtcct
gggcagagccaagtaaccccccaggatcaagaaaaggcagctttgatcatgcaggttctt
cagctgactgcagatcagattgccatgctgcctcctgagcaaaggcagagtatcttgatt
ttaaaggaacaaatccagaaatctactggaacttcttga
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