Capricornis sumatraensis (Sumatran serow): 138070364
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Entry
138070364 CDS
T10522
Symbol
VTI1A
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
138070364 (VTI1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csum04131
]
138070364 (VTI1A)
Membrane trafficking [BR:
csum04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
138070364 (VTI1A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Laminin_II
LMBR1
Sec20
DUF6987
Mer2
Peptidase_S46
Sec8_N
MMPL
DUF1664
Fusion_gly
DUF5339
HAAS
FapA
Motif
Other DBs
NCBI-GeneID:
138070364
NCBI-ProteinID:
XP_068817655
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Position
23:33084411..33457895
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AA seq
217 aa
AA seq
DB search
MSSDFEGYEQDFAVLTAEITNKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVR
EIPPQSRGMYSNRMRSYKQEMGKLEADFKRSRIAYSDEVRNELLGDDGNSSENQRAHLLD
NTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDANLGKSSRV
LTGMLRRIIQNRILIVILGIVLVITILTAITFSVRGH
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgactttgaaggctacgagcaggacttcgcggtgctcacagcagagatcacc
aacaagattgcaagggtcccccgactcccacctgatgagaagaagcagatggttgcaaat
gtggagaaacagctcgaagaagcgaaagaactgctggaacagatggatttggaagtccga
gagatacctccccaaagtcgaggaatgtacagcaacaggatgagaagctacaagcaagaa
atgggaaaactcgaggcagatttcaaaaggtcacggatcgcctacagtgacgaagtacgg
aatgagctcctaggggatgatgggaattcctcagagaaccagagggcacatctgctcgat
aacacagagaggctggaaaggtcatctcggagactagaggctggataccaaatagcagtg
gaaaccgaacaaattggccaggagatgttggaaaacctcagtcacgacagagaaaagata
cagagagcacgtgaaaggcttcgggaaacagatgctaacttggggaaaagctccagggtt
ctgacagggatgttgcgaagaatcatccagaaccggatcctgatcgtcatcctgggcatc
gtcctggttatcaccatcctgacggcgatcactttttctgtcagaggacactga
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