Capricornis sumatraensis (Sumatran serow): 138070367
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Entry
138070367 CDS
T10522
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04382
Cornified envelope formation
csum04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
138070367 (COL17A1)
09158 Development and regeneration
04382 Cornified envelope formation
138070367 (COL17A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
DUF2868
Motif
Other DBs
NCBI-GeneID:
138070367
NCBI-ProteinID:
XP_068817664
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Position
23:complement(24929902..24971075)
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AA seq
1485 aa
AA seq
DB search
MDVTKNKRDGTEVTERIITETVTTRLTSLPPKGGASNGYAKTGSLGGGSRLEKQSLTHGS
SGYINSSGSMRGNASTSSYRRAHSPASTLPNSPGSTFERKTHVTRHGTYEGSSSGNSSPE
YPRKEFASSSTRGRSQTRESEIRVRLQSASPSTRWTELDDVKRLLKGSRSASVSPTRNSS
NTLPIPKKGTVETKVVTASSQSVSGTYDTTILDANLPSHVWSSTLPAGSSMGTYHNNITT
QSSSLLNTNAYSAGSVFGVPNNMASCSPTLQPGISTSSSVFGMQNNLAPSSSTLSHGMAA
TSTAYGVKKNMPQSPTAVSTGVSTSAASTTNVQNDDLLHKDCKFLILEKDNTPAKKEMEL
LIMTKDSGKVFTASPASVTATSFSEDTLKKEKQAAYTDTYLVSEANGDVKTVSAKGKGSS
ADIHGYDHRHGGGGGGGGSGGALGSGAAGGGGKGSWGAAPAWCPCGSWCSWWKWLLGLLL
TWLLLLGLLFGLIALAEEVRKLKARVEELEKMRGRLSYNEKMERSSQDSVQGVAPRLGEG
LGKSGLDGYNLEDIWQFVSVRLKTEQENGNLRGSPGPKGDMGVQGPKGDRGFPGTPGIPG
PLGHQGPEGPKGQKGNMGEPGMEGPMGQRGREGPMGPRGEPGPPGVGEKGDRGDAGKPGI
PGPPGVPGSVGPKGSSGSPGPQGPPGSIGPQGLRGEVGLPGIKGDKGPMGPPGPKGDQGE
KGPRGLTGEPGLKGLPGAVGEPGAKGAMGPAGPDGHQGPRGEQGLPGMPGTRGLPGPSGD
PGKPGLTGPQGPQGIPGTPGRPGVKGEPGAPGKIVTSEGSSTITVPGPPGPPGAMGPPGP
PGAPGPVGPAGLPGQQEGIDLRGPPGPPGPPGPPGELSIPGSPGPQGPAAESWVGEGLPG
PPGPPGSLLTSSETFFSGPPGPPGPPGPKGDQGPPGPRGHQGERGPPGLSGSGASSLGLN
LQGPPGPPGPQGPKGDKGDPGVPGAPGIPGGPSRGGSSSSTMFMQGPPGPPGPPGPPGSL
SSSGLEIQQYISDYMQSDSIRSYLSGVQGPPGPPGPPGPVTTITGETFDYSQLASLVVSY
LQTSGYSIGTSSTSISSEDILAALRRDDVRQYLRQYLMPQGASGDWFLQSLDYAELSNRI
LSYMSSTGVSIGLPGPPGPPGLPGTSYEELLSLLQGSEFRGIVGPPGPPGPPGLPGSSWS
SISMEDLSSYLQTAGLSSIPGPPGPPGPPGPRGPPGISGALATYAAENSDSFRSELISYL
TSPDVRSFIVGPPGPPGPQGPPGDSRLVSTDSSYSRSGSSSSFSRDTSYSSSMGIGGASG
GTLGEGGAFGMDMGRAYGAVPEGGMYGSDGRFGAGFAGGLDYNELAVRVSESLQRQGLLQ
GMAYTVQGPPGRPGPQGPPGISKIFSAYSNVTEDLMDFFRTYGAIPGPPGQKGEMGIPGP
KGERGPAGPPGRSGPPGPRGHKGEKGDKGDQVYTGRRRRSIAVKP
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaccaagaacaaacgagatggcactgaagtcactgaaagaatcatcacagaa
acagtaactacaagacttacatccttaccaccaaaagggggtgccagcaatggctatgct
aaaacagggtctctgggtggagggagccggctggagaaacagagcctgacgcatggcagc
agcgggtacataaactcaagtgggagcatgcgaggcaatgcctccacctccagttacagg
agggcccattcacctgcctccactctgcccaactcaccaggctcaactttcgagaggaag
actcatgtcacccgccatggaacatatgaagggagctccagcggcaactcttcccccgag
tatcctcggaaggaatttgcatcttcttcaaccagaggacgtagccaaacacgagaaagc
gagatccgagtccgactgcagagcgcatccccatccacccgctggacagaattggatgac
gtcaaacgtttgctcaaggggagccgctcagcaagtgtgagccccacccggaattcctct
aacacactccccatccccaagaaaggcactgtggagaccaaggtggtgacagcgagctcc
cagtcagtgtctggcacctatgatacaaccatcctggatgccaaccttccctcccatgtg
tggtcctccacgttgccggcagggtcctccatgggcacctatcacaacaacatcacaacc
cagagctcatccctgctcaacaccaatgcctattctgcaggatcagtctttggagttcca
aataacatggcctcctgctccccaactctgcagcccggaatcagcaccagctcctcagtg
ttcggcatgcagaacaatctggcccccagctcatccaccctgtcccacggcatggctgcc
acctccacagcatacggtgtgaagaaaaacatgccccagagccccactgctgtgagcact
ggggtgtccacttctgcagccagcaccacaaatgtccagaatgatgacctcttgcacaag
gactgtaaattcctgatcctggagaaggacaacacgcccgccaagaaagagatggagctg
ctgatcatgaccaaggacagcgggaaggtctttacagcctccccagccagcgtcactgca
acttctttttcagaggacaccctaaaaaaggaaaaacaagctgcatacactgacacctac
ctagtgtcagaagctaacggagatgtgaagactgtgtctgcaaagggcaagggctcctct
gcagacatccacggctacgaccaccgccatggtggtgggggcggcggcggcggcagtggc
ggtgcccttggcagtggggccgctggtggagggggcaagggctcgtggggggcggcgcct
gcctggtgcccctgtggctcctggtgcagctggtggaagtggctgctgggcctgctgctc
acctggctactgctcctggggctgctcttcggcctcatcgctctggccgaggaggtgagg
aaactgaaggcacgtgtggaggagctggagaaaatgaggggccgcttgtcttacaacgag
aagatggagaggagcagccaggactctgtgcagggggttgcgcccaggctgggggaaggt
ctaggaaaatctgggcttgatggctacaatctggaggacatctggcaattcgtgagtgtc
aggctgaagacagaacaggaaaacggaaatctccgaggaagccctgggcctaaaggtgac
atgggagttcaaggccctaaaggagaccgcgggttccctggaactccaggtatccctggg
cccttgggccaccaaggtccagagggaccaaagggacagaaaggcaacatgggtgagcct
ggcatggagggacccatgggccagagagggcgagaaggccccatgggacctcgtggtgaa
ccagggccccctggggtcggagagaaaggagaccgaggggatgctggtaaaccaggtatt
cctggcccacctggtgtcccaggctctgtcggtcccaaaggttccagtggttctcctggc
ccacagggtcccccaggctctataggtccccaaggactccgaggtgaagtgggactccct
ggtatcaaaggtgacaaaggacccatgggaccaccgggacccaaaggtgaccagggtgag
aaaggaccccgaggcctcacaggcgagcctggcttgaaaggtttacctggtgccgtgggt
gagcccggggctaaaggagcgatgggacccgctggccccgacggacatcaaggcccaaga
ggggaacaaggtcttccaggaatgccgggaacccggggcttaccaggaccttctggggac
ccagggaagccaggtctcactggaccccaaggacctcaggggattcctggtacccccggc
agaccaggagttaaaggtgaaccaggagctccaggcaagatcgtgacttcagagggatcg
tcgactatcactgtcccaggtcccccgggacctcctggagccatgggacctccaggacct
ccgggagccccaggccctgttggtccagctggtctcccaggacagcaagaaggtattgat
ttacgaggccccccaggcccacctggaccacctgggccaccaggtgaactgtccattcca
ggctccccaggaccccaaggcccagcagctgagagctgggtaggggaaggcttgccaggc
ccaccgggcccaccaggatctctcctgaccagctcagagaccttcttctctggccctcca
ggcccacctggccccccaggccccaagggagaccaaggccccccaggcccccgaggacac
caaggcgagcgaggccccccagggctatcaggctcaggcgccagttctcttggactcaac
ctgcagggaccaccaggcccacccggccctcagggacccaagggtgacaaaggtgatccc
ggagtcccaggggctcctggcattcctggtgggccctctcgagggggatcgtcgtcaagc
accatgttcatgcagggtccgccaggcccaccagggccccccgggcctccaggctccctc
agcagctctggcctggagattcagcaatacatctctgactacatgcagagtgacagtatc
aggtcttatctgtctggagttcagggtcccccaggcccacctggtccccctgggcctgtc
accaccatcaccggtgagacttttgactactcacagctggccagcctcgtcgtgagctac
ttacagacttccgggtacagcatcggcacatcctccacctccatctcttctgaagacatc
ctggctgcgctccggcgcgatgatgtgcgtcagtatctacggcagtacctgatgccacaa
ggagccagtggagattggttcctccagtctctggattatgcagagctgagcaaccgcatc
ctcagctacatgtccagcactggagtcagcatcgggcttcctggccccccggggccccca
ggcttgccgggcacatcctatgaggagctcctttccttgctccaagggtctgagttcaga
ggtatcgttgggcccccaggtccccctgggcccccagggctcccaggcagttcatggtcc
agcatcagcatggaggacctctcatcctacctgcagactgccggcttgtcatccatccca
ggccctcctggtcccccaggccccccaggccctagagggcccccgggcatctcaggagct
ctggcgacatacgcagctgaaaacagtgacagcttccggagtgagctgatcagctatctc
acaagtcctgatgtgcgcagcttcatcgttggccccccgggtccccccgggccccagggc
ccccccggggacagccgcctggtgtccacggacagctcctacagccggagtggcagctcc
tcctctttcagtcgggacacctcctatagctcctccatgggcataggaggagccagtgga
ggcaccctgggcgaagggggagcctttggcatggacatgggccgagcctatggggccgtg
cccgagggtggcatgtatggcagcgatggcagattcggggctggctttgccggaggcctg
gattacaatgagctggctgttcgggtgtcagagagcttgcagcgtcagggtctgctccaa
gggatggcatacacggtgcagggacccccaggccggcctgggccccagggaccccctggc
atcagcaagatcttctccgcctacagcaatgtgaccgaggacctcatggactttttccga
acttatggagccatcccaggaccccctgggcagaagggagagatgggcatccctggaccc
aaaggtgagaggggccctgctgggccaccaggtcggtctgggccacccggccctcgaggg
cacaagggagaaaaaggagacaaaggtgaccaagtctacactgggcggaggaggaggagc
attgccgtcaagccataa
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