Capricornis sumatraensis (Sumatran serow): 138070495
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Entry
138070495 CDS
T10522
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csum03016
]
138070495 (TRUB1)
Enzymes [BR:
csum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
138070495 (TRUB1)
Transfer RNA biogenesis [BR:
csum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
138070495 (TRUB1)
Prokaryotic type
138070495 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
138070495
NCBI-ProteinID:
XP_068817859
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All DBs
Position
23:35514958..35544934
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AA seq
351 aa
AA seq
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MAAAEAAAVVLSSCLKPDPAPVPESAGTAAATAATSSAMAAAAAVAAAARTGSEARISKP
ALATKLLSLSGVFAVHKPKGTTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGT
LDSAARGVLVVGIGRGTKMLTSMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQ
EDIESILQKFTGNIMQVPPLYSALKKDGQRLSALMKRGEEVEAKPARPVTVYSLSLQKFQ
PPFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDD
IAQSLERCSSLFPAELALKKSKPEESNEQVLSCEYITLNETKGEDDVIKTL
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgaggcggcggcggtggtgttgtcgtcctgtttgaaaccagacccagcc
ccagtccccgaaagtgcagggacagctgcagccacggccgccacatcctcagcgatggct
gcagccgcggcggttgcggccgcggccaggaccggatccgaagccaggatctcgaagccc
gcgttggctactaagctgctgtccctgagcggcgtgttcgctgtgcacaagcccaaaggg
accacttcagccgagttgctgaatcggctgaaggagaagctgctggcagaagctggaatg
ccttctccagaatggaccaagaggaaaaagcagactttgaaaattgggcatggagggacc
ctagacagtgcagcccgaggagtcctggtggttggaattggaaggggaacaaaaatgttg
accagtatgttatcagggtccaagagatatattgccattggggaactggggaaggctact
gacacgctagattctacagggaaagtaacggaagaaaaaccttatgataaaataacacaa
gaagatattgaaagcattctacagaaattcactgggaatataatgcaagtacctcccctc
tattctgcattgaagaaagatggccagaggctttcagctttgatgaagagaggtgaagaa
gtggaagcaaagcccgccaggccagttactgtatacagtctctcccttcagaaattccag
ccaccatttttcaccctagatgtcgaatgtggaggaggtttttatatcagaagcttggtc
agtgacattggcaaagaactctcttcctgtgccaatgtgctagagctgacgcgaaccaag
cagggaccattcaccctggaggagcatgccctgcccgaggacaagtggacgattgatgac
attgcacagtctctcgagcggtgctcatctcttttcccagcagagctggcacttaaaaaa
tcaaaacctgaggagtctaatgagcaagttttgagctgtgagtatataactctgaatgag
acaaagggagaagacgatgtaattaagacactttaa
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