Capricornis sumatraensis (Sumatran serow): 138070850
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Entry
138070850 CDS
T10522
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04613
Neutrophil extracellular trap formation
csum05014
Amyotrophic lateral sclerosis
csum05034
Alcoholism
csum05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
138070850 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
138070850 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
138070850 (HDAC6)
09165 Substance dependence
05034 Alcoholism
138070850 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csum01009
]
138070850 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csum03019
]
138070850 (HDAC6)
04131 Membrane trafficking [BR:
csum04131
]
138070850 (HDAC6)
03036 Chromosome and associated proteins [BR:
csum03036
]
138070850 (HDAC6)
Enzymes [BR:
csum01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
138070850 (HDAC6)
Protein phosphatases and associated proteins [BR:
csum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138070850 (HDAC6)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
138070850 (HDAC6)
Membrane trafficking [BR:
csum04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
138070850 (HDAC6)
Chromosome and associated proteins [BR:
csum03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
138070850 (HDAC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
LysX_preATP_grasp
Motif
Other DBs
NCBI-GeneID:
138070850
NCBI-ProteinID:
XP_068818235
LinkDB
All DBs
Position
X
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AA seq
1129 aa
AA seq
DB search
MTSTGQDSTTPKERRSRHNPHSPTHDSSITSKRGIKKGAILRSSPSLAEVKKKGRMKKLS
QTAEQDLIMGLQGLNLNLEARTLSGTGLVFDEQLNEFHCLWDDSFLERPERLHAIKEQLI
QEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELHVLADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLEAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHDIQRVLIVDWDVHHGQGIQFAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGLGQG
QGYTINVPWNQVGMQDADYIAAFLHVLLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAEGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLESPGAPCPSA
QVSLSCALEALEPFWESLVRSVESLEERDTVEKDDVEEKEEEKLPQSSELSVPIWPVLQA
RTGLVYDQRMMEHYNLWDNYHPEMPQRIHCIMHHLDELGLAKRCHSLPARPATDAELLTC
HSAEHLERLRATEKMKTRELRREGANYDSIYICSSTFACAQLAAGAACRLVEAVLAGEVL
NGIAVVRPPGHHAEPDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDIHHGNGTQHI
FEEDPSVLYISLHRYDHGTFFPMGNEGACTRTGKATGTGFTVNVAWNGPRMGDADYLAAW
HRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGHIILILE
GGYNLTSISESMAACTRSLLGDPLPLLTRLRPPLSGAQDSITKTIQVHRRYWCSLRVMKR
KNIEGLSSSKLITKKPSQPASSELPNVTTTVEGNILGAGMGQAASEASVKESTPDQTESA
TAPVELTQGQSSDTATQGAALDQTISEGATGGAELIQNPPASCINNRIPPALPVQGAAAQ
TSPSKLTANLRILDLDSTTQEPSEEEGLLGEAAGGQDTNESVPVQVFGDHADTDQVMFYA
VRPLLWCPHLAAVCPIPETGLNVTQPCQDCGTLQENWVCLSCYQIYCGRYINAHMLQHHE
GSGHPLVLSYADLSAWCYHCQAYVHHKDLLAVKNIAHQNKFGEDIPHSD
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggtcaggattccaccacacccaaggagcgaaggagtaggcacaatccc
cactcccccacccatgactccagcatcacctcgaagcgaggtattaaaaagggtgccata
ctccgctccagccccagtctagcggaggtaaagaagaaaggcagaatgaagaagcttagc
caaacagccgagcaagacctcatcatggggctgcaagggctgaatctgaacctggaggcc
aggacactgtctggcactggcttggtgttcgatgaacagctaaatgaattccactgcctc
tgggatgacagcttcctggaacgcccagagcggctccatgccatcaaggagcaactgatc
caggagggcctcctggaccgctgcgtgtcctttcaggcccgattcgccgaaaaggaggag
ctgatgttggttcacagcctagaatatattgatctgatggaaacgacccagtacatgaac
gagggggagctccacgtcctagcagatacctatgactcagtttatctgcatccgaactca
tacacctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgcagtcctggag
gctgagatccggaatggcatggccatcatcaggcctcctggacaccatgcccagcacagt
ctcatggatggatattgcatgttcaaccacgtggccgtggctgcccgttatgctcaacag
aagcatgatattcagagggtccttatcgtggattgggatgtgcaccatggtcagggaata
cagttcgcctttgaccaagatcctagtgtcctctatttctccatccaccgctatgagcaa
ggtcggttctggccccatcttaaggcctctaattggtccaccacaggtttaggccaaggc
cagggatacaccatcaacgtgccttggaaccaggtggggatgcaagatgctgactacatc
gccgctttccttcacgtcctcctgccagtcgcatttgagttccagccccagctggtcctg
gtagccgctggatttgatgccctccaaggggaccccaagggtgagatggccgccactcca
gcagggttcgcccagctcacccatctgctcatgggtctggcagaaggcaagctgatcctc
tcactggagggtggctataatctccgctctctggctgaaggtgtcagcgcctccctccac
acccttctgggtgacccttgtcctatgttagagtctcctggtgccccctgcccgagtgcc
caggtgtcactctcctgtgctctagaagccctggaacccttctgggagagccttgtgaga
tcagttgagagcctggaagaaagggacactgtggagaaggatgatgtggaagagaaggag
gaagagaaactgccacagtcctctgagctctccgttccaatatggccggtgctgcaggct
cgcacggggttggtctatgaccagcggatgatggagcactacaacttgtgggataactac
caccctgagatgccccagcgcatccactgtatcatgcatcacctggacgaactgggcctt
gccaagcgctgccactccctgcccgcaaggcccgctacagatgctgagctgctcacctgc
cacagtgccgagcacttggaacgtctgcgggccacggagaagatgaagaccagggagctg
cgccgtgagggtgccaactatgactccatctacatctgctccagcacttttgcctgtgca
cagctggctgcaggcgccgcctgtcgcctggtggaggcagtactggcaggagaggttttg
aatggcattgctgtagtgcgacctcctggccaccatgcagagccggatgcagcttgtggt
ttctgtttttttaattctgtggctgtggctgctcgccatgcccaggccatcagtgggcat
gcgctgcggatcctgatcgtggactgggacatccatcatggtaatggaactcagcacata
tttgaggaggaccccagtgtgctgtacatttccctgcaccgctatgatcatggtaccttc
tttcccatggggaatgagggtgcctgtacccgaacaggtaaagctacaggcacaggattc
actgtcaatgtggcctggaatgggccccgcatgggtgatgctgactacctggctgcctgg
caccgtctggtgcttcccattgcttatgagtttaacccagaactggtgctggtctcagct
ggctttgatgctgctcggggggatcctctgggcggctgccaggtgtcgcctgagggctat
gcccacctcacccacctgctgatgggcttggccaatggccatatcatcctaatcctagag
ggtggctataacctgacgtccatctcagagtccatggctgcctgcactcgctccctcctt
ggggatccactgcccctgctgacccggctgcggcccccactatctggagcccaggattct
atcactaaaaccatccaagtccatcgaagatactggtgcagtttgcgggtcatgaagcgc
aaaaacatagagggactgtccagttctaagttgatcaccaagaagccatcccaacctgcc
agttctgagttacccaatgtgacaaccacagtggaagggaacatcctgggggcaggcatg
ggacaggccgcctcagaagcatctgtgaaagagtccactccagatcagactgagtcagcg
acagctccagtagaacttactcagggccagtcctcagacacagccacacaaggagctgca
ctggaccagaccatctcagagggggccacaggaggagctgagctgatccaaaacccgcca
gcctcatgcatcaacaacaggattcctcctgccttacctgtgcaaggagccgcagcccag
acatcccctagtaagctgacggcaaacctcagaatattggacctagatagcacgactcag
gagccctcagaagaggaaggactactaggagaggcagctggaggtcaggacacgaatgag
tcagtgccagtgcaggtctttggagatcatgctgacactgaccaggtcatgttttatgct
gtgagaccactgctttggtgtcctcatttggcggcagtatgccccatacctgagacaggg
ctgaatgtgacccaaccttgtcaggactgtggaacactccaagagaactgggtgtgtctg
tcttgctatcagatctactgcggtcgttacatcaatgctcatatgctccaacaccatgaa
ggttcgggacacccactagtactcagctatgccgacctgtctgcctggtgttaccactgt
caggcctatgtccaccacaaggatctcctagcagtgaagaacatcgcccaccagaacaag
tttggggaagacataccccattcagactaa
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