Capricornis sumatraensis (Sumatran serow): 138070893
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Entry
138070893 CDS
T10522
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03013
Nucleocytoplasmic transport
csum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138070893 (UPF3B)
03015 mRNA surveillance pathway
138070893 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csum03019
]
138070893 (UPF3B)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
138070893 (UPF3B)
mRNA cycle factors
P-body specific factors
138070893 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
138070893
NCBI-ProteinID:
XP_068818313
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All DBs
Position
X:complement(27682890..27699092)
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AA seq
483 aa
AA seq
DB search
MKEEKEHRPKEKRVTLLTPPGATGSGGGASGDSTKGEDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRIPERDKLKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREK
LKKLDKENLSDERASGQSCTLPKRSEGEFKDEKPKRPEDESGREYRERERDYDRDQERIL
RERERLKRQEEERRRQKERYEKEKAFKRKEEEMKKEKETLRDKGKKPESTEPVGSSEKTE
KKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDSTKSGDSAIERKQESGISHRKEG
SEE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggagaaggagcacaggcctaaggagaagcgagtaaccctcttgactccccca
ggtgctacaggcagcggcggtggggcttcgggagacagcaccaaaggggaagataagcag
gatcggaacaaggagaagaaagaggcgttgagcaaggtggtaattcggagattaccgccc
actttgaccaaggagcagcttcaggaacatcttcagcctatgcctgagcatgattatttt
gagtttttttctaatgatactagtttgtatcctcatatgtatgcaagagcatacatcaac
tttaaaaaccaagaggacattattttgttcagggatcgttttgatggttatgtattcctt
gacaataaaggtcaggaatatcctgccatcgtagaatttgcaccttttcaaaaagctgca
aaaaagaagactaagaaaagagatactaaagttggaactattgatgatgatccagaatat
agaaaatttttggagagctatgctgcagataatgagaaaatgacatctactccagagaca
ctgctagaggaaatagaagcaaaaaatagagaactaatagctaaaaagacaactccactt
ttgagcttcctgaaaaacaagcagaggatgagagaagaaaagagagaagaaaggaggcgg
cgagaaatagaaagaaaaagacaaagagaagaagagaggagaaagtggaaagaagaagag
aaacgaaaacggaaagatatagaaaagctaaagaagatagacagaattccagaaagggac
aaattaaaggatgaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatctgctcaagaagccagaaaaaggagatgaaaaagaattggacaaaagagaaaag
ctcaagaaattggacaaagagaatctgagtgatgaaagagccagtgggcaaagttgtaca
ttgcccaagcgttctgagggtgaatttaaagatgaaaagcctaagagacctgaagatgag
agtggcagagaatacagggagagggagcgggattatgatcgagaccaagagcgcatcctg
cgggagagagagaggctgaagcggcaggaagaagagcgccgcaggcagaaggagcgctat
gagaaagagaaggctttcaagagaaaggaagaagaaatgaagaaggagaaagaaacactt
cgggataaaggaaagaagcctgaaagtacagagccagtaggcagctcagaaaaaactgaa
aagaaagaagaagtggttaagagagatcgcataagaaacaaggatcgcccggcgatgcag
ctttaccagccaggagctcgaagccgaaatcgactctgtccccctgatgacagcaccaag
tctggagattcagccatagaaagaaagcaggaaagtggtattagccatagaaaagaagga
agcgaggagtga
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