Capricornis sumatraensis (Sumatran serow): 138072038
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Entry
138072038 CDS
T10522
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04151
PI3K-Akt signaling pathway
csum04382
Cornified envelope formation
csum04510
Focal adhesion
csum04512
ECM-receptor interaction
csum04820
Cytoskeleton in muscle cells
csum04926
Relaxin signaling pathway
csum04933
AGE-RAGE signaling pathway in diabetic complications
csum04974
Protein digestion and absorption
csum05146
Amoebiasis
csum05165
Human papillomavirus infection
csum05200
Pathways in cancer
csum05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
138072038 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138072038 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138072038 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138072038 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
138072038 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
138072038 (COL4A5)
09158 Development and regeneration
04382 Cornified envelope formation
138072038 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
138072038 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
138072038 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
138072038 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
138072038 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
138072038 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csum04147
]
138072038 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
csum00536
]
138072038 (COL4A5)
Exosome [BR:
csum04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
138072038 (COL4A5)
Glycosaminoglycan binding proteins [BR:
csum00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138072038 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
138072038
NCBI-ProteinID:
XP_068819485
LinkDB
All DBs
Position
X:15835405..16084856
Genome browser
AA seq
1685 aa
AA seq
DB search
MKLRGVSLAAGLSLLALSLWGQPAEAAACYGCSPGSKCDCSGIKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
VPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPG
IQGPAGPPGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGVKGEKGEQGEPGKRGKP
GKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGVTVGEKGN
IGLPGLPGDKGDRGFPGIQGPPGLPGPPGPAVIGPPGPPGFPGERGQKGDEGPPGISIPG
SPGLDGQPGAPGPPGPPGPPGPHIPPSDKICEAGPPGPPGSPGDRGLQGEQGMKGDKGDT
CFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGHAGATGPKGLTGIPGGPGAPGF
PGPKGEPGDILTFPGMKGDKGDLGSPGVPGLPGLPGTPGQDGLPGLPGPKGEPGGMAFKG
ERGPPGNPGLPGLPGNRGPMGPVGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTIT
QPGKPGLPGHPGRDGEVGLPGEPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGI
PGPPGAPGSPGRIGLEGPSGPPGFPGPKGEPGFGLPGPPGPPGLPGFKGILGPKGDRGFP
GPQGPPGQAGLDGLPGPKGDIGPNGQPGPMGPPGLPGTGFQGPPGPPGIPGPIGQPGLHG
LPGEKGDPGPPGFDVPGPPGERGSPGIPGAPGPMGPPGSPGLPGKAGASGFPGAKGEMGM
MGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPAGEKGSKGEPGLPGLPGPMDPDLL
GSKGEKGDPGLPGIPGVAGPKGYQGLPGDPGQPGLSGPPGLPGPSGPKGNPGLPGMPGLT
GPPGLKGNMGDMGFPGPQGAKGSSGPPGVPGQPGSPGLPGQKGEKGDPGISGIGLPGLPG
PKGEPGLPGYPGNPGTKGSMGETGLPGLPGTPGAKGQPGLPGFPGTPGLPGPKGINGPPG
NPGLPGEPGPVGGGGRPGPPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDEGLPGIPGNPGLPGPKGEPGFHGFPGLQGPPGPPGSPGPALEGPKGSPGPQGPP
GRPGPPGPEGPRGLPGSGAIKGERGNPGQPGQPGLPGLKGDQGPPGLQGNPGRPGLNGMK
GDPGLPGVPGFPGMKGPSGVPGSTGPEGDPGLIGPPGPPGLPGPSGQSIVIKGDAGPPGI
PGQPGLKGLQGLPGPQGLPGPIGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGP
PGPDGLQGPPGPPGTSSIAHGFLITRHSQTTDAPQCPQGTIQVYEGFSLLYVQGNKRAHG
QDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLKGQSIQPF
ISRCAVCEAPAVVIAVHSQTIQIPRCPQGWDSLWIGYSFMMHTSAGAEGSGQALASPGSC
LEEFRSAPFIECHGRGTCNYYANSYSFWLATVDVSDMFSKPQSETLKAGDLRTRISRCQV
CMKRT
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtggagtcagcctggctgccggcttgtccttactggccctgagtctttgg
gggcagcccgcagaggctgcggcttgctatgggtgttctccaggatcaaagtgtgactgt
agtggtataaaaggagaaaagggggagagaggatttccaggtttggaaggccacccaggt
ttgcctggatttccaggtccagaagggcccccagggcctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaagggatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccatgatggggccccaggacctcaaggt
gtccctggatgcaatggaaccaagggagaacgtggatttccaggcagtcccggttttcct
ggtttacagggtcctccaggacctcctgggatcccaggtatgaagggggaaccgggtagt
ataatcatgtcatcactgccgggaccaaagggtaatccaggatatccaggtcctcctggc
attcaaggcccagctggtccccctggtataccagggccaattggtcccccaggaccacca
ggtttgatgggccctcctggcccaccaggacttccaggaccaaaggggaatatgggatta
aatttccagggacccaagggtgagaagggtgagcaaggtcttcagggcccccctgggcca
cctgggcagatcagtgaacaaaaaagaccaatcgacgtagagtttcagaaaggagatcag
ggacttcctggtgaccgagggcctcctggacccccagggatacgtggtcctccaggtcct
ccaggtggtgtgaaaggtgagaagggtgagcaaggagagcctggcaaaagaggtaaacca
ggcaaagatggagagaatggccaaccaggaattccaggtttgcctggtgatcctggttac
cctggtgaaccaggaagagatggagaaaagggtcaaaaaggtgacactggcccacctggg
cctcctggacttgtaatacctaggcctgggactggtgtaactgtaggagaaaaaggaaac
attgggttacctggcttgcctggagataaaggagatcgaggatttcctgggatacaaggt
ccaccaggccttcctggacctccaggacctgcagttataggtcctcctggaccccctggc
tttcctggggaaaggggtcagaaaggtgatgaaggtccacctggaatttccattcctgga
tctcctggacttgatggacagcctggggctcctggccctcctggcccccctggccctccc
ggccctcacatccctcctagtgataagatatgtgaagcaggccctcctggccctccagga
tctccaggtgatagaggactccaaggagaacaaggaatgaaaggtgacaaaggtgacacc
tgcttcaactgtattggaactggtatttcagggcctccaggtcagcctggtttgccaggt
cttccaggtcccccaggatctcttggtttccctggacagaagggcgaaaaaggacatgct
ggtgctactggtcccaaaggattaacaggcataccaggaggtccaggtgctccaggcttt
cctggacctaaaggtgaacccggtgacatcctcacatttccaggaatgaagggtgacaaa
ggagatttgggttcccctggagttccagggcttcctggtttacctggcacccctggacag
gatggattgccaggacttcctggccccaaaggagaacctggtggaatggcttttaagggt
gaaagaggtccccctgggaacccaggtttgccaggtctcccaggaaatagggggcctatg
ggccctgttggttttggccctccaggtccagtaggtgaaaaaggcatacaaggtgtggca
ggaaatccaggccaaccaggaataccaggtccgaaaggtgatccaggtcagaccataacc
caaccagggaagcctggcctgcctggtcacccaggcagagatggtgaagtaggtcttcca
ggtgaacctggactcccaggccagccaggcttgccaggaatacctggtagtaaaggcgaa
ccgggtatccctggaatcgggcttcctggaccacctggtcccaaaggttttcctggaatt
ccaggacctccaggagcacctggatcacctggaagaatcggtcttgaaggtccttctggg
ccaccaggctttccaggaccaaagggagaaccaggatttgggctacctgggccacccggg
cctccaggactcccaggtttcaaaggaatacttggtccaaaaggggatcgtggtttccca
ggacctcaaggtcctccaggacaagctggcttggatgggctacctggaccaaaaggtgac
attggaccaaatggacaacctgggccaatgggacctcctggattgccaggaacaggtttt
cagggaccaccagggccaccaggaattcctggaccaataggccaacctggcctgcatgga
ctaccaggagagaagggggatccagggcctcctggatttgatgttccaggacctcctggt
gagagaggcagcccagggatccctggagcaccaggtcctatgggacccccagggtcacca
gggctcccaggaaaagcaggtgcctctggctttccaggtgccaaaggtgaaatgggtatg
atgggacctccaggcccaccaggacctttgggaattcctggcaggagtggtgttcctggt
ctcaaaggtgatgatggtttgcagggtcagccaggacttcctggccctgcaggagagaaa
ggtagtaaaggagagcctggccttccaggccttcctgggccaatggatccagatctgctg
ggctcaaaaggagagaaaggggaccctggcctaccaggtattcctggagttgcagggcca
aaaggttaccagggtttgcctggagacccggggcaacctggactgagcggaccacctgga
ttgccaggaccatcaggtcccaagggtaaccctggtctccctggaatgccaggacttaca
ggacctcctggacttaaaggaaacatgggtgatatgggttttccaggcccacagggtgca
aaagggtcttctggacctcctggagttcctggacaacctggctccccaggattacctgga
cagaaaggagaaaaaggtgatcctggtatttcaggcattggtcttccaggtcttcctggc
ccaaagggtgaacctggtctgcctggatacccagggaaccctggtaccaaaggttctatg
ggagaaactggtttgcctggattaccggggacccctggagcaaaaggacagccaggcctt
cctggattccctggaaccccaggccttcctggaccaaaaggtattaatggtcctcctggg
aaccctggccttccaggagaacctggtcctgtaggtggtggaggtcgtcctgggccacca
gggcctccaggtgaaaaaggcaaaccaggtcaagatggtattcctggaccagctggacag
aagggtgaaccaggtcaaccaggctttggaatcccaggaccccctggacttccaggactt
tctggtcaaaagggtgatgaaggattacctggcattccaggaaaccctggccttccaggt
ccaaagggtgaaccaggctttcatggtttccctggtctgcagggtcccccaggccctcct
ggttctccaggtccagctctggaaggccctaaaggcagccctggaccccaaggtcctcct
gggagaccaggtccaccaggtccagaaggtccccggggtctacctggaagtggggctatt
aaaggagaaagaggtaacccaggccaacctgggcaacctggtttgcctggtttgaaaggt
gatcaaggtcctccaggactccagggtaaccccggccggccaggtctcaatggaatgaaa
ggagatcctggtctccctggtgttccaggatttccaggcatgaaaggacccagtggagta
cctggttcaactggccctgagggggatccaggacttattggcccaccaggtccccctgga
ttacctggtccttcaggacagagtattgtaatcaaaggagatgctggcccaccagggatt
ccaggccagcctggattaaaaggtttacaaggactcccaggacctcagggtttaccaggt
ccaattggccctccaggagatcctggacgcaatggactccctggctttgatggtgcagga
ggacgcaaaggagacccaggtttgccaggccagccaggtactcgtggcttggatggtccc
cccgggccagatggattgcagggtcctccaggtccccctggaacctcttctatcgcccat
gggtttctcatcacacgtcacagccagacaacagatgctccacaatgcccacagggaacc
atccaggtgtatgaaggcttttctctcctgtatgtacaaggaaataaaagagctcatggt
caagacttgggaacagccggcagctgccttcgtcgtttcagtaccatgcctttcatgttc
tgcaacatcaataatgtttgcaactttgcttcaagaaatgattattcttactggctctcc
accccagagcccatgccaatgagcatggaacccctgaaggggcagagcatccagccattc
attagtcgatgtgcagtatgtgaagctcctgccgtggtgattgcagtccacagtcagacc
atccagattccccgttgtcctcagggatgggattctctctggattggttattccttcatg
atgcacacaagtgcaggggcagagggctcaggccaagccctggcctcccctggttcctgc
ttagaagagtttcgttcagctcccttcattgagtgtcatgggcgggggacctgcaactat
tacgccaactcctacagcttttggctggcgactgtagatgtgtcagacatgttcagcaaa
cctcaatcagaaacgctgaaagcaggggacttgaggacacgcattagccgatgccaagtg
tgcatgaagaggacatag
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