Capricornis sumatraensis (Sumatran serow): 138072038
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Entry
138072038 CDS
T10522
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04151
PI3K-Akt signaling pathway
csum04510
Focal adhesion
csum04512
ECM-receptor interaction
csum04820
Cytoskeleton in muscle cells
csum04926
Relaxin signaling pathway
csum04933
AGE-RAGE signaling pathway in diabetic complications
csum04974
Protein digestion and absorption
csum05146
Amoebiasis
csum05165
Human papillomavirus infection
csum05200
Pathways in cancer
csum05222
Small cell lung cancer
Brite
Exosome [BR:
csum04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
138072038 (COL4A5)
Glycosaminoglycan binding proteins [BR:
csum00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138072038 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138072038
NCBI-ProteinID:
XP_068819485
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Position
X:15835405..16084856
Genome browser
AA seq
1685 aa
AA seq
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MKLRGVSLAAGLSLLALSLWGQPAEAAACYGCSPGSKCDCSGIKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
VPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPG
IQGPAGPPGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGVKGEKGEQGEPGKRGKP
GKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGVTVGEKGN
IGLPGLPGDKGDRGFPGIQGPPGLPGPPGPAVIGPPGPPGFPGERGQKGDEGPPGISIPG
SPGLDGQPGAPGPPGPPGPPGPHIPPSDKICEAGPPGPPGSPGDRGLQGEQGMKGDKGDT
CFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGHAGATGPKGLTGIPGGPGAPGF
PGPKGEPGDILTFPGMKGDKGDLGSPGVPGLPGLPGTPGQDGLPGLPGPKGEPGGMAFKG
ERGPPGNPGLPGLPGNRGPMGPVGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTIT
QPGKPGLPGHPGRDGEVGLPGEPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGI
PGPPGAPGSPGRIGLEGPSGPPGFPGPKGEPGFGLPGPPGPPGLPGFKGILGPKGDRGFP
GPQGPPGQAGLDGLPGPKGDIGPNGQPGPMGPPGLPGTGFQGPPGPPGIPGPIGQPGLHG
LPGEKGDPGPPGFDVPGPPGERGSPGIPGAPGPMGPPGSPGLPGKAGASGFPGAKGEMGM
MGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPAGEKGSKGEPGLPGLPGPMDPDLL
GSKGEKGDPGLPGIPGVAGPKGYQGLPGDPGQPGLSGPPGLPGPSGPKGNPGLPGMPGLT
GPPGLKGNMGDMGFPGPQGAKGSSGPPGVPGQPGSPGLPGQKGEKGDPGISGIGLPGLPG
PKGEPGLPGYPGNPGTKGSMGETGLPGLPGTPGAKGQPGLPGFPGTPGLPGPKGINGPPG
NPGLPGEPGPVGGGGRPGPPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDEGLPGIPGNPGLPGPKGEPGFHGFPGLQGPPGPPGSPGPALEGPKGSPGPQGPP
GRPGPPGPEGPRGLPGSGAIKGERGNPGQPGQPGLPGLKGDQGPPGLQGNPGRPGLNGMK
GDPGLPGVPGFPGMKGPSGVPGSTGPEGDPGLIGPPGPPGLPGPSGQSIVIKGDAGPPGI
PGQPGLKGLQGLPGPQGLPGPIGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGP
PGPDGLQGPPGPPGTSSIAHGFLITRHSQTTDAPQCPQGTIQVYEGFSLLYVQGNKRAHG
QDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLKGQSIQPF
ISRCAVCEAPAVVIAVHSQTIQIPRCPQGWDSLWIGYSFMMHTSAGAEGSGQALASPGSC
LEEFRSAPFIECHGRGTCNYYANSYSFWLATVDVSDMFSKPQSETLKAGDLRTRISRCQV
CMKRT
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtggagtcagcctggctgccggcttgtccttactggccctgagtctttgg
gggcagcccgcagaggctgcggcttgctatgggtgttctccaggatcaaagtgtgactgt
agtggtataaaaggagaaaagggggagagaggatttccaggtttggaaggccacccaggt
ttgcctggatttccaggtccagaagggcccccagggcctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaagggatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccatgatggggccccaggacctcaaggt
gtccctggatgcaatggaaccaagggagaacgtggatttccaggcagtcccggttttcct
ggtttacagggtcctccaggacctcctgggatcccaggtatgaagggggaaccgggtagt
ataatcatgtcatcactgccgggaccaaagggtaatccaggatatccaggtcctcctggc
attcaaggcccagctggtccccctggtataccagggccaattggtcccccaggaccacca
ggtttgatgggccctcctggcccaccaggacttccaggaccaaaggggaatatgggatta
aatttccagggacccaagggtgagaagggtgagcaaggtcttcagggcccccctgggcca
cctgggcagatcagtgaacaaaaaagaccaatcgacgtagagtttcagaaaggagatcag
ggacttcctggtgaccgagggcctcctggacccccagggatacgtggtcctccaggtcct
ccaggtggtgtgaaaggtgagaagggtgagcaaggagagcctggcaaaagaggtaaacca
ggcaaagatggagagaatggccaaccaggaattccaggtttgcctggtgatcctggttac
cctggtgaaccaggaagagatggagaaaagggtcaaaaaggtgacactggcccacctggg
cctcctggacttgtaatacctaggcctgggactggtgtaactgtaggagaaaaaggaaac
attgggttacctggcttgcctggagataaaggagatcgaggatttcctgggatacaaggt
ccaccaggccttcctggacctccaggacctgcagttataggtcctcctggaccccctggc
tttcctggggaaaggggtcagaaaggtgatgaaggtccacctggaatttccattcctgga
tctcctggacttgatggacagcctggggctcctggccctcctggcccccctggccctccc
ggccctcacatccctcctagtgataagatatgtgaagcaggccctcctggccctccagga
tctccaggtgatagaggactccaaggagaacaaggaatgaaaggtgacaaaggtgacacc
tgcttcaactgtattggaactggtatttcagggcctccaggtcagcctggtttgccaggt
cttccaggtcccccaggatctcttggtttccctggacagaagggcgaaaaaggacatgct
ggtgctactggtcccaaaggattaacaggcataccaggaggtccaggtgctccaggcttt
cctggacctaaaggtgaacccggtgacatcctcacatttccaggaatgaagggtgacaaa
ggagatttgggttcccctggagttccagggcttcctggtttacctggcacccctggacag
gatggattgccaggacttcctggccccaaaggagaacctggtggaatggcttttaagggt
gaaagaggtccccctgggaacccaggtttgccaggtctcccaggaaatagggggcctatg
ggccctgttggttttggccctccaggtccagtaggtgaaaaaggcatacaaggtgtggca
ggaaatccaggccaaccaggaataccaggtccgaaaggtgatccaggtcagaccataacc
caaccagggaagcctggcctgcctggtcacccaggcagagatggtgaagtaggtcttcca
ggtgaacctggactcccaggccagccaggcttgccaggaatacctggtagtaaaggcgaa
ccgggtatccctggaatcgggcttcctggaccacctggtcccaaaggttttcctggaatt
ccaggacctccaggagcacctggatcacctggaagaatcggtcttgaaggtccttctggg
ccaccaggctttccaggaccaaagggagaaccaggatttgggctacctgggccacccggg
cctccaggactcccaggtttcaaaggaatacttggtccaaaaggggatcgtggtttccca
ggacctcaaggtcctccaggacaagctggcttggatgggctacctggaccaaaaggtgac
attggaccaaatggacaacctgggccaatgggacctcctggattgccaggaacaggtttt
cagggaccaccagggccaccaggaattcctggaccaataggccaacctggcctgcatgga
ctaccaggagagaagggggatccagggcctcctggatttgatgttccaggacctcctggt
gagagaggcagcccagggatccctggagcaccaggtcctatgggacccccagggtcacca
gggctcccaggaaaagcaggtgcctctggctttccaggtgccaaaggtgaaatgggtatg
atgggacctccaggcccaccaggacctttgggaattcctggcaggagtggtgttcctggt
ctcaaaggtgatgatggtttgcagggtcagccaggacttcctggccctgcaggagagaaa
ggtagtaaaggagagcctggccttccaggccttcctgggccaatggatccagatctgctg
ggctcaaaaggagagaaaggggaccctggcctaccaggtattcctggagttgcagggcca
aaaggttaccagggtttgcctggagacccggggcaacctggactgagcggaccacctgga
ttgccaggaccatcaggtcccaagggtaaccctggtctccctggaatgccaggacttaca
ggacctcctggacttaaaggaaacatgggtgatatgggttttccaggcccacagggtgca
aaagggtcttctggacctcctggagttcctggacaacctggctccccaggattacctgga
cagaaaggagaaaaaggtgatcctggtatttcaggcattggtcttccaggtcttcctggc
ccaaagggtgaacctggtctgcctggatacccagggaaccctggtaccaaaggttctatg
ggagaaactggtttgcctggattaccggggacccctggagcaaaaggacagccaggcctt
cctggattccctggaaccccaggccttcctggaccaaaaggtattaatggtcctcctggg
aaccctggccttccaggagaacctggtcctgtaggtggtggaggtcgtcctgggccacca
gggcctccaggtgaaaaaggcaaaccaggtcaagatggtattcctggaccagctggacag
aagggtgaaccaggtcaaccaggctttggaatcccaggaccccctggacttccaggactt
tctggtcaaaagggtgatgaaggattacctggcattccaggaaaccctggccttccaggt
ccaaagggtgaaccaggctttcatggtttccctggtctgcagggtcccccaggccctcct
ggttctccaggtccagctctggaaggccctaaaggcagccctggaccccaaggtcctcct
gggagaccaggtccaccaggtccagaaggtccccggggtctacctggaagtggggctatt
aaaggagaaagaggtaacccaggccaacctgggcaacctggtttgcctggtttgaaaggt
gatcaaggtcctccaggactccagggtaaccccggccggccaggtctcaatggaatgaaa
ggagatcctggtctccctggtgttccaggatttccaggcatgaaaggacccagtggagta
cctggttcaactggccctgagggggatccaggacttattggcccaccaggtccccctgga
ttacctggtccttcaggacagagtattgtaatcaaaggagatgctggcccaccagggatt
ccaggccagcctggattaaaaggtttacaaggactcccaggacctcagggtttaccaggt
ccaattggccctccaggagatcctggacgcaatggactccctggctttgatggtgcagga
ggacgcaaaggagacccaggtttgccaggccagccaggtactcgtggcttggatggtccc
cccgggccagatggattgcagggtcctccaggtccccctggaacctcttctatcgcccat
gggtttctcatcacacgtcacagccagacaacagatgctccacaatgcccacagggaacc
atccaggtgtatgaaggcttttctctcctgtatgtacaaggaaataaaagagctcatggt
caagacttgggaacagccggcagctgccttcgtcgtttcagtaccatgcctttcatgttc
tgcaacatcaataatgtttgcaactttgcttcaagaaatgattattcttactggctctcc
accccagagcccatgccaatgagcatggaacccctgaaggggcagagcatccagccattc
attagtcgatgtgcagtatgtgaagctcctgccgtggtgattgcagtccacagtcagacc
atccagattccccgttgtcctcagggatgggattctctctggattggttattccttcatg
atgcacacaagtgcaggggcagagggctcaggccaagccctggcctcccctggttcctgc
ttagaagagtttcgttcagctcccttcattgagtgtcatgggcgggggacctgcaactat
tacgccaactcctacagcttttggctggcgactgtagatgtgtcagacatgttcagcaaa
cctcaatcagaaacgctgaaagcaggggacttgaggacacgcattagccgatgccaagtg
tgcatgaagaggacatag
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