Capricornis sumatraensis (Sumatran serow): 138072672
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Entry
138072672 CDS
T10522
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csum03041
]
138072672 (DDX20)
Enzymes [BR:
csum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138072672 (DDX20)
Spliceosome [BR:
csum03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
138072672 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
138072672
NCBI-ProteinID:
XP_068819845
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Position
2:complement(132779662..132790443)
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AA seq
825 aa
AA seq
DB search
MAAAFEAPAALSTVETAMPAERVATQFSSPEPASRPVRSLRTAHDISGPRTRTGDVLLAE
PADFESLLLSRPVLEGLRAVGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIA
LDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK
CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML
AVSATYPEFLANALTKYMREPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKTQHL
QELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPAEYISGNMNQNQRLDAMAKLKQFHC
RVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEEN
MMMKIAQKCTINLLPLPDPIPPGLMEECLDWDVEVEAAVHTYGLASVPTQPLKKHVQKIE
RTFQTQKAHGKHMASSRNTSVSAVSVKSKNNTKQKLPVKSHSECGIVEKAISPKELGCAV
QLEEQMKNSVQTSVENPTNSQHQVKEASVSLPKIPCLSSFKSHLPCILTFAELVEDYEHY
IKEGLEKPVEIIRHYTGPGDQSVNPQNGFVKNRITEERVKIVASSSQSGDSESDSDSYSS
RASSQSRGNKSRLEVSSDTRLKDSESIPVDGRISLEQPLNGNDTPSLVEYQEATESQVKT
RHKEGASHNQRAKQSRRNLPRRSSYRLQTEPQEDGWYDCQRETHPSFSDTYQDYEEYWRA
YYRAWQEYYAAASQSYYWNAQRHPSWMAAYQMNTVYLQEMMHSNQ
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcgtttgaagctccggccgccttatcgaccgtggagacagctatgccggcg
gagcgtgtggccacgcagttctcgtccccggagccagcctcccggccggtgcggagcctg
cggacggctcacgacatcagcggcccgcggacccgcactggggacgtgctgctggcggag
ccggcagacttcgagtcgctgctgttgtcgcgcccggtgctggagggcctgcgggcggtt
ggcttcgagcggccgtcgcccgtgcagctgaaggccatcccgctggggcgatgtggactc
gatttaattgttcaggctaagtctggaactgggaaaacctgtgtcttctccaccattgct
ttggactctcttgttcttgagaacctaagtacccagattttgatcttggctcctacaaga
gaaattgctgtacagatacattctgttatcacagctattggaataaaaatggaagggtta
gagtgtcatgtgtttattggagggactccattatcacaagacaaaaccagacttaaaaag
tgtcatattgctgttggttctcctggcagaattaaacaactgatagaacttgactacttg
aatccaggcagtatacgtctctttattcttgatgaagcagataagcttttagaagaaggc
agcttccaggagcaaataaattggatttattcttccttgcctgcaagtaaacagatgttg
gcagtgtcagctacttaccctgaatttttggctaatgctttgacaaagtacatgagggag
cccacttttgtaagactaaattccagtgatccaagtctaataggtttgaagcagtattat
aagattgtcaattcataccctttggcccataagatttttgaggaaaagactcaacattta
caggaactgttcagcaaaattccatttaatcaagccttagtcttttctaacttacacagc
agagcacaacacttggctgatatcctttcttctaaaggctttcctgccgagtacatttca
ggcaacatgaatcagaatcagcgtcttgatgccatggctaaactgaagcagtttcattgc
agagtcctcatttccacagatttgacttcccgtggaattgatgctgagaaggtgaaccta
gttgtaaacctggatgtaccattggattgggagacatatatgcatcggattggcagagct
ggccgttttggtactttgggactgacagtgacctactgctgcaggggagaagaagaaaac
atgatgatgaaaattgcccagaaatgtactatcaatcttctgcctttaccagatcctatt
cctcctggtctgatggaagaatgtttggattgggatgtggaggttgaagctgccgtgcat
acatatggtttagcaagtgtacctacccagcctctaaaaaagcacgttcaaaaaatagag
agaacctttcaaactcagaaagctcatggtaaacacatggcttcatctagaaatacttct
gtatctgcagtatcagtgaaatcaaaaaataataccaaacaaaaacttcctgtgaaaagc
cattcagagtgtggaatcgtagaaaaagccatatcaccgaaagaactgggctgtgcagta
caactggaagagcaaatgaagaattctgtccagacctctgttgaaaaccctactaacagt
cagcaccaagtcaaagaagcttctgtgtcactccccaaaattccttgtctgtcttccttt
aaatcccatttgccgtgtattttgacttttgcagaattggtggaggattatgaacactat
attaaagagggtttagagaaacctgtggaaatcatcagacactacacaggtcctggggat
cagtctgtgaatcctcaaaatgggtttgtgaaaaatagaattactgaagagagagtgaag
atagtggcaagtagcagccaatctggagactccgagagtgacagtgattcttacagctca
agggcttcttcccagagcagaggaaataagtcacgcttggaagtttcttctgacactcgg
ctgaaagactcagaatctattcctgtggatggccgtatctctttggaacagcctctgaat
ggaaatgacacccctagcctagtagagtatcaagaagcaactgaaagccaagtaaagaca
aggcataaggagggagctagccataaccagagagctaagcagagccggagaaaccttccc
aggcgatcttcctatcgactgcagacagaaccccaggaagatgggtggtatgactgccag
agggaaacacatccaagtttttctgatacgtatcaggactatgaggagtactggagagct
tactacagggcatggcaggaatactacgctgctgcttctcagtcgtattattggaatgct
cagaggcatccaagttggatggcggcctatcagatgaataccgtttatctacaagaaatg
atgcacagcaaccagtga
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