Capricornis sumatraensis (Sumatran serow): 138072868
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Entry
138072868 CDS
T10522
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csum03041
]
138072868 (DDX1)
03016 Transfer RNA biogenesis [BR:
csum03016
]
138072868 (DDX1)
Enzymes [BR:
csum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138072868 (DDX1)
Spliceosome [BR:
csum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
138072868 (DDX1)
Transfer RNA biogenesis [BR:
csum03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
138072868 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
138072868
NCBI-ProteinID:
XP_068820266
LinkDB
All DBs
Position
1:23919855..23950868
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKATIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLTKGKHYYEVSCHDQGLCRVGWSTMQACLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKAPESFVVKSQHTGNAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDEVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRTLGGGSYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgagatgggtgttatgcctgagattgcacaagccgtggaagagatg
gattggcttctcccaactgatatccaggctgaatcgatccccctgatcctaggaggaggt
gatgtccttatggctgcagaaacaggaagtggaaaaactggggctttcagtattccggtt
attcagatagtgtatgaaactctgaaagaccaacaagaaggcaaaaaaggaaaagcgaca
attaaaactggtgcttcagtgctgaacaaatggcaaatgaacccatatgacagaggatct
gctttcgcaattgggtcagatggtctttgttgtcagagcagagaagtaaaggaatggcat
ggatgcagagccaccaaaggcttaacgaaagggaagcactactatgaggtatcctgtcat
gaccaagggttgtgcagagttgggtggtctaccatgcaagcatgcctagacctcggtact
gacaagtttggatttggctttggtggaacagggaagaaatcccacaacaagcagtttgat
aattatggagaggaattcactatgcatgataccattggatgttacctagatatagataaa
ggccatgtcaaattctccaaaaacggcaaagatcttggtctggcatttgaaataccacca
catatgaagaaccaagccctgtttcctgcctgtgttttgaagaacgcggaactcaaattt
aacttcggggaagaagagttcaagtttccaccgaaagacggtttcgttgccctttccaag
gcgccggagagtttcgttgtcaagtcgcagcacacaggtaatgcgcaggtggcacaaaca
aagtttctccccaatgctccaaaagctctcatcgtcgagccttcccgggagttggctgaa
caaactctgaataacgtcaagcagtttaagaaatacatcgataatcctaagttaagggag
cttctgataattggaggtgtcgcagcacgggatcagctctctgttttggataatggggtg
gatatcgtcgttggcactccaggaagactggatgatttggtgtctacaggaaagctgaac
ttatcccaagtcagattcctggtcctggatgaagctgatgggcttctttctcaaggttac
tctgattttatcaataggattcacaatcagattcctcagattacctccgatggaaaaagg
cttcaggtgattgtgtgctcagccactttgcattcttttgatgtgaagaaactgtctgag
aagatcatgcactttcccacgtgggttgatttgaaaggagaggattctgttccagatact
gtgcaccacgttgttgtcccagtgaaccccaaaactgacaggctctgggaaaggcttggg
aaaagccacattaggactgatgaagttcatgcgaaagataatacaagacctggtgctaac
agtccagagatgtggtctgaagctattaagatcctgaagggggagtatgctgtccgagcc
atcaaggaacacaagatggatcaagcaattattttctgtagaaccaagatcgactgtgac
aacttggagcagtattttatgcagcaaggaggaggacctgataaaaagggacatcagttc
tcttgtgtttgtcttcatggtgacagaaagcctcatgagaggaagcaaaacttggaaaga
ttcaagaaaggagatgtcagattcttgatttgcacagatgtagctgccagaggaattgat
atccacggtgttccttatgtcataaatgtcaccttgcctgatgaaaagcaaaactatgtc
catcgcattggcagagtaggaagagctgaaaggatgggtctggccatttccctggtggca
acagaaaaagagaaggtttggtatcatgtatgtagcagccgtgggaaagggtgttataac
acaagactcaaggaagatggtggctgtaccatatggtacaatgagatgcagttgctgtcc
gagatagaggaacacctgaactgtaccatttctcaggttgagccagatataaaagtacca
gtagatgaatttgatgggaaggttacttacggccagaaaagaactcttggtggtggaagc
tataaaggccacgtggatattttggctcctacggttcaagagttggctgcccttgaaaag
gaggcccagacatctttcctgcatcttggctaccttcctaaccagctgttcagaaccttc
tga
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