Capricornis sumatraensis (Sumatran serow): 138073454
Help
Entry
138073454 CDS
T10522
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03013
Nucleocytoplasmic transport
csum03015
mRNA surveillance pathway
csum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138073454 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
138073454 (ACIN1)
03015 mRNA surveillance pathway
138073454 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csum03019
]
138073454 (ACIN1)
03041 Spliceosome [BR:
csum03041
]
138073454 (ACIN1)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
138073454 (ACIN1)
Spliceosome [BR:
csum03041
]
Complex C
Other components
EJC/TREX
138073454 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
138073454
NCBI-ProteinID:
XP_068821300
LinkDB
All DBs
Position
2:complement(79137193..79176422)
Genome browser
AA seq
1332 aa
AA seq
DB search
MCRRKHPSTSGGTRGVLSGNRGVDYGSGRGQLGTFEGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASADSEDEMIHPEGVA
SLLPPDFQSSLERPELELSRHSPRKSTSISEEKGESDEEKPRKGERRSSRVRQARAAKLS
ECSQAAEEEEDQETPSRNLRVRADRNLKTEEEEEEEEEEEEEEEDDDEGQKSRDAPVLKQ
FKEEGEEIPIVKVEEVTDERPQTIRSQEQEGLERGGRVTRSQEEARRSHLARHQQEKEMK
TASLEEEEREIKFSKGLEEISKSPSPPRLTEDVAKAPVVLQPELTASEEETPPPLLTKEA
SSPPPNTQLQSEEEIEPMEGPAPPVLIQLSPPHADAEARELLLSQHTVQLVGSLSPLSGP
ADTKVESPVEKVPEESVLPLVQKSTQAESSAQKGLETESEKSTQALPLKIEEFTLAKGIT
EESLEQKEGRRASHVLLPSHRLKQSADSSSSRSSSSSSSSSRSRSRSPDSSGSQSHSPPR
SKQRDASGARAHANPRDRSKVGSRSTSESRSRSRSRSRSASSNSRKSLSPGVSRDNSTSY
TETKDPSSGQEVAAPPLPQLQVLEPKERTSTPSSIQVRRVSQPEPAEKHVTQRLQPDRGS
PKKCEAEEAEPPAATQPQTSETPASHLPESERTHHTVEEKEEVTMDTSENRAENEVPEPP
MPIADQVSNDDRPEGSAEDEEKKESLLPKSFKRKISVVSATKGVPAGNSDTEGGQPSRKR
RWGASTAATQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDSRISEDETERNGDDG
THDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEAPVPPQVSVEVALPPPVEHEVK
KVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVRPFTLGQLK
ELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKFLCADYAEQ
DELDYHRGLLVDRPSETKTEEQGMPRPLHPPPPPPTQPPQHPRAEQREQERAVREQWAER
EREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKAQEEPPAK
LLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKEREKEAER
ERTRQLEREKRREHSRERDRERERDRERDRGDRDRERDRERERGRERDRRDTKRHSRSRS
RSTPVRDRGGRR
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagacggaaacacccgagcacttccggaggaacccggggagttctgagtggtaat
cgaggggttgactatggcagtgggcggggccaactcggtacgttcgaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctg
aaggccgcactggagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaag
cggctcaaaggggctctaatgctagaaaatttacaaaaacactcaaccccgcatgctgca
ttccagccaaattcccagattggtgaggaaatgagccagaacagttttataaagcagtat
ctggaaaagcagcaggagctgcttaggcagcgtttggaacgtgaagctcgagaagctgca
gaacttgaagaagcttcagctgattcggaggatgagatgatccatcctgagggagtggct
tccctgctgcctcctgactttcagagcagcctggagagaccagagctggagctcagcaga
cattcacccagaaaaagcacctctatttctgaagagaaaggtgaatctgatgaggagaaa
ccaaggaaaggagaaagacgatcatccagagtcagacaggcaagagcagctaaactctcc
gagtgtagccaggctgcagaggaggaagaggatcaagaaacaccttctagaaatctgagg
gtcagagcagatcgaaatttgaaaacagaggaggaggaagaagaggaggaagaggaggag
gaagaggaggaagatgatgatgagggacaaaaatctagagatgcaccagtcctgaaacaa
tttaaggaagagggagaagagatacctatagtaaaagtggaggaggtgacagatgagaga
ccccaaactataagatcccaggaacaggaggggttagagagaggagggagagttacaagg
tcccaggaggaggcccgaagaagtcatctagccagacatcagcaggagaaagagatgaaa
acagcttctcttgaagaagaagaaagagaaataaaattttcaaaaggcttggaggaaata
tccaagtctccttcccctcctcgattgactgaagatgtggcgaaggccccggttgtgcta
caaccagaactaactgccagtgaggaggagactcccccacctttacttaccaaggaagca
tcttctccaccacctaatacacagctccagagtgaagaagaaatagagcccatggaaggc
ccagctcctcctgtcctcattcagttatctcctcctcatgcagatgctgaggccagggaa
ctattactctctcagcatactgtgcagttggtgggaagtttgtctcctttgtcaggtcct
gcagacaccaaagttgaatctccagttgagaaagtgccagaggagagtgtcctgcctcta
gttcagaaaagcacacaagctgaatcctcagcccagaaaggtcttgaaactgaatcagaa
aaatccactcaagcactccctctaaaaattgaggaattcacgctggctaaagggatcact
gaggaatctttggaacagaaagaaggcaggagggcttctcatgtccttcttccaagccac
agattgaaacagtcagctgactcctcctctagccgatcctcctcatcttcatcctccagt
tctagatcgagatctcgctctcctgacagttcaggctctcagtctcactcacctccaaga
tccaagcagagagatgcatctggggcacgtgctcatgccaaccctcgtgatagatccaag
gtgggctccagatcaacatcagagtccaggtcacgttcccgttctcgttcccggtcagca
tcaagcaacagcagaaaatctctgagccctggagtctctagggacaacagcaccagctac
actgaaaccaaagatccctcttctggtcaggaggttgcagccccaccattgccacagctg
caggtccttgagccaaaggagaggacttccaccccatcctctatccaagtgaggcgtgtg
agccaacctgagccagctgaaaagcatgtgacccagaggttacagcctgatcgggggagc
ccaaagaagtgtgaagctgaagaggcagagccaccggctgccacacagccccagacctca
gagactccggcctctcacctaccagaatcagaaaggactcatcacactgttgaggagaag
gaggaagtgaccatggacacaagtgaaaacagagctgaaaatgaggttccagagcccccc
atgcctattgcagaccaagtcagcaatgatgaccgcccagagggcagtgctgaggatgag
gagaagaaagagagcttgctgcccaaatcattcaagaggaagatctccgttgtctcagct
accaagggggtgccggctggaaacagtgacacagaggggggccagcctagtcggaagcgg
cgttggggagccagcacagccgccacccagaagaaaccctccatcagtatcaccaccgaa
tcgctcaagagcctcatccccgacatcaaacccctggcggggcaggaggctgttgtggat
cttcatgctgacgactcccgaatctctgaggatgagacagagcgtaatggtgatgatggg
acccatgacaaggggctgaaaatatgccggactgtcactcaggtggtacctgctgagggc
caggagaatgggcagagggaagaggaggaagaagagaaagagcctgaagccgaagcccct
gtacctccccaggtctcagtagaggtggccttgcccccccctgtggaacatgaagtcaag
aaagtgactttaggagataccttaactcgacgttccattagccagcagaagtcaggagtt
tccattacgattgatgacccagtccggactgctcaggtgccctccccaccccggggcaag
atcagtaacatcgtccacatctccaatttggttcgtcccttcactttaggccaactgaag
gagttgttgggacgtacaggaactctggtagaagaggctttttggattgacaagatcaaa
tctcactgctttgtaacgtactcgacagtagaggaagcagttgccacccgcacagctcta
catggggtcaaatggccccagtccaaccccaaattcctttgtgctgactatgctgagcaa
gatgagctggactatcaccgaggcctcttggtggaccgtccctctgaaactaagacagag
gagcaggggatgccacggccactacaccccccgcccccacccccaacccagccaccacag
caccccagggcagaacagcgggagcaggagcgggctgtacgggagcagtgggcagaacgg
gaacgggaaatggagcggcgggagcggactcgatccgagcgcgaatgggatcgggacaaa
gttcgagaagggccccgttcccgatcccggtcccgtgatcgccgccggaaggaacgcgca
aagtctaaagaaaagaagagtgagaagaaagagaaagctcaggaagaaccacctgccaag
ctgctggatgaccttttccgcaagaccaaggcagctccctgcatctattggctcccactg
actgacagccagattgttcagaaggaggcagagcgggccgaacgggccaaggagcgggag
aagcggcgaaaggagcaagaagaagaagagcagaaggagagggagaaggaggcggagcgg
gaacggacccggcagctggagcgagagaagcggcgagaacacagccgagagagggacagg
gagagagagagggaccgggagcgggacaggggggatcgagatcgggagagggacagggag
cgggaacgaggcagggagagggaccgcagagacaccaagcgccacagtaggagccggagc
aggagcacacctgtgcgggaccggggcgggcgccgctag
DBGET
integrated database retrieval system
