Capricornis sumatraensis (Sumatran serow): 138073563
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Entry
138073563 CDS
T10522
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04140
Autophagy - animal
csum04148
Efferocytosis
csum05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138073563 (VPS18)
04148 Efferocytosis
138073563 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
138073563 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csum04131
]
138073563 (VPS18)
Membrane trafficking [BR:
csum04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138073563 (VPS18)
Hops complex
138073563 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
138073563
NCBI-ProteinID:
XP_068821488
LinkDB
All DBs
Position
2:complement(66222802..66231220)
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AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSTVLQPGCPSVGIPHSGYVNAQLEKEEPIFTKQRIDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHMELGRKDDAKVHKMFLDPTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPEGRGFVIATTRQRLFQFIGRVAEGAE
AQGFSGLFAAYADHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGSLDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDRFL
EKFGPLKHMAKDPSTGHLWAHSERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLANL
KPAERTQATLLTAWLTELYLSRLGALQGDPDALNLYRETRERFRSFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
VLIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPAKGSARAKEAEGGAAAGGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctatcctggatgaatacgaggactccctgtcccgctcgaccgtcttgcagccc
ggctgccccagcgtgggcatcccccactcgggatatgtgaatgcccagctagagaaagaa
gaacccatcttcacaaagcagcgcattgactttaccccttccgagcgcatcaccagtctt
gttgtctcctgcaatcagctctgcatgagcctcggcaaggatacactactccgcattgac
ttgggcaaagcaaatgaacccaaccacatggagctggggcgcaaggatgatgccaaagtt
cacaagatgttcctggaccccactggctctcatctgctgatcgctctgagcagcactgag
gtcctctatgtgaatcgtaatggacagaaggttcggcccctggcacgctggaaggggcag
ctggtggagagtgtgggctggaataaggccctgggcaccgagagcagcaccggccccatc
ctggtcggcaccgcccaagggcagatcttcgaagcagagctttcggccagcgagggtggg
ctctttggccctgccccggatctctacttccgtccattgtacgtgctaaatgaagaaggg
ggcccagcacctgtgtgctcccttgaggctgagcggggccctgaagggcgcggttttgtc
atcgccaccactcggcagcgcctcttccagttcataggccgagtggcggagggagctgag
gcccagggtttctcggggctctttgctgcctacgctgaccacccacccccattccgtgag
ttccccagcagtctgggctacagcgagctggccttttacacccccaaattgcgctctgcg
ccccgggccttcgcctggatgatgggagatggcgtgttgtatggatcgttggactgtggg
cgtccggactccctgctgagtgaggagcgggtctgggagtacccagagggggtgggcccc
ggggccagcccgcccctggccatcgtcctgacccagttccacttcctgctgctgctggca
gaccgggtggaggcagtgtgcacgctgacggggcaggtggtgctgcgggaccgcttcctg
gagaagttcgggccgctgaagcacatggcgaaggacccctccacgggccacctgtgggcc
cactccgagcgggctgtcttccgctaccacgtacagcgggaggcacgggatgtctggcgc
acctacctagacatgaaccgcttcgacctggccaaggagtattgtcgagagcggcctgac
tgcctggacacagtcctggcccgggaggccgacttctgcttccgccagcgtcgctacctg
gagagcgcccgctgctatgccctgactcagagctactttgaagagattgcccttaagttc
ttggaggcccgacaggaggaggcgctggccgagttcctgcagcgaaaactggctaatttg
aagcctgccgaacgaacccaggcaaccctgctgaccgcctggctgacggagctctacttg
agccggctcggggctctgcagggtgaccccgatgccctgaacctctaccgggaaacccgt
gagcgcttccgctccttcctcagcagccctcgccacaaggagtggctcttcgccagccgg
gcctccatccacgagctcttggccagccacggggacacggagcacatggtgtacttcgct
gtgatcatgcaggactacgagcgcgtggtggcttaccactgccagcatgaggcctacgag
gaggccttggccgtgctggcccgccaccgtgacccccagctcttctacaagttctcgccc
gtcctcatccgtcacatccctcgccagctggtggatgcctggattgagatgggcagccgg
ctggatgcccggcagctcatccctgccctggtgaactatagccaaggtggcgaggcccag
caggtgagccaagccatccgctacatggagttctgcgtgaacgtgctgggcgagaccgag
caggccattcacaattacctgctgtcgctctatgcccggggccagccggcctcactgctg
gcctacctggagcaggccggggccagcccgcaccgcgtgcactatgatctcaagtatgcg
ctgcggctctgcgccgagcatggccaccaccgtgcttgtgtccacgtctacaaggtcctg
gagctctatgaggaggctgtggacttggccctgcaggttgacgtggacctggccaagcag
tgtgctgacctgcctgaggaagacgaggagctgcgcaagaagctgtggctgaagattgcg
cggcatgtggtgcaggaggaggaagatgtgcagacggccatggcctgcctggccagctgc
cccctgctcaagattgaagatgtgctgcctttctttcctgactttgtcaccattgaccac
ttcaaggaggccatctgcagctcactgaaggcctacaaccaccacatccaagagctacag
cgagagatggaagaggccacagccagtgcccagcgcatccggagagacctgcaggagctg
cggggccgctatggtaccgtagagccccaggacaaatgtgctacctgcgacttccccctg
ctcaaccgccccttttacctcttcctctgtggccacatgttccatgctgactgcctgctg
caggccgtgcggcccggcctgccggcctacaagcaggcccggctcgaggagctgcaacga
aagctgggggctgctccaccccctgccaagggctctgcccgggctaaggaggctgagggg
ggcgctgctgctggggggcccagccgggaacagctcaaggctgacctggatgaacttgtg
gccgctgagtgcgtatactgtggggagctgatgatccgctctattgaccggcccttcatc
gacccccagcgctacgaggaggagcacctcagttggttgtag
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