KEGG   Capricornis sumatraensis (Sumatran serow): 138073586
Entry
138073586         CDS       T10522                                 
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X1
  KO
K05236  coatomer subunit alpha
Organism
csum  Capricornis sumatraensis (Sumatran serow)
Brite
KEGG Orthology (KO) [BR:csum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csum04131]
    138073586 (COPA)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csum04147]
    138073586 (COPA)
Membrane trafficking [BR:csum04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    138073586 (COPA)
Exosome [BR:csum04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   138073586 (COPA)
  Exosomal proteins of bladder cancer cells
   138073586 (COPA)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR36-Utp21_1st WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_RFWD3 WD40_MABP1-WDR62_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 138073586
NCBI-ProteinID: XP_068821514
LinkDB
Position
2:110929845..110975329
AA seq 1224 aa
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNTEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPELDIPSGAAG
GAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQFGPYKQLFL
QTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKIKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQI
CKVTTVTEIGKDVIGLRISPLQFR
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgctaaccaaatttgagaccaagagtgcgcgggtcaaaggactcagctttcaccccaaa
agaccctggatcctgaccagtttacacaatggggtcatccagttatgggactatcggatg
tgtaccctcattgacaagtttgatgaacatgatggtccagtacgaggcattgacttccat
aagcagcagccactgtttgtctctggaggagatgattataagattaaggtctggaattac
aagcttcggcgctgtctcttcacattgcttgggcacttagactacatccgcactacgttt
tttcatcatgaatatccttggattctgagtgcctcagatgatcagaccatccgagtgtgg
aattggcagtctagaacctgtgtctgtgtgttaacagggcacaatcattacgtcatgtgc
gcccagttccacccttcagaagacctggtcgtgtcagccagcctggaccagactgtgcgc
gtttgggatatttctggtctaaggaaaaaaaacctgtcccctggtgcagtggagtcggat
gtgagaggaataactggggttgatctgtttggaactacggatgcagtggtgaagcatgta
ctagagggtcatgatcgtggagttaactgggctgcatttcaccctactatgccactcatt
gtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaatcaaaggcatgg
gaagttgatacctgccggggccattacaacaatgtatcttgtgctgtcttccaccctcgt
caagagttgatcctcagcaattctgaggacaagagtatccgagtctgggacatgtctaag
cggactggagttcagacattccgcagggaccatgatcgtttctgggtcttagctgcccac
cctaaccttaacctctttgcagcaggccatgatggtggcatgattgtatttaaactggaa
cgagaacggccagcctatgctgttcatggcaatatgctccattatgtcaaggaccgattc
ttacgtcagttggatttcaacagctccaaagatgtggctgtgatgcagttgcggagtggt
tccaagtttccagtgttcagtatgtcgtacaatccagcagaaaatgcagtcctactctgt
acaagagccagcaatttagaaaatagtacctatgacttgtacaccatccccaaggatgct
gactcccagaatcctgatgctcctgaagggaaacgatcctcaggcctgacagctgtttgg
gttgctcgaaatcggtttgctgtcctagatcggatgcattcgcttctgatcaagaatcta
aagaatgagatcaccaaaaaggtacaggtgcctaactgcgatgagattttttatgctggc
acgggcaacctcctgcttcgagatgcagaatccatcacgctctttgatgtacagcagaag
cggactctggcatctgtgaagatttccaaggtgaagtacgttatctggtcagcagacatg
tcccatgtagcactactggccaaacatgccattgtgatctgtaaccgcaaactggaggct
ctatgtaacattcatgagaacattcgtgtcaagagtggggcctgggatgagagtggggta
tttatctataccacaagcaaccacatcaaatatgctgtcaccactggggactatgggatc
atccgaactctggatttacctatctacgtcacgcgggtgaagggcaacaatgtatattgc
ctggacagggagtgtcgtcctcgggtgctcaccattgatcccactgagttcaagttcaaa
ctggccctgatcaacagaaaatatgacgaggtgctacacatggtgaggaatgcaaaactc
gtaggccagtctatcattgcttatcttcagaagaagggatatcctgaagtggcgctgcat
ttcgtcaaggatgagaaaactcgcttcagtctggcactggagtgtggaaacactgagatt
gctctggaagcagccaaagcactggatgacaagaactgctgggaaaagctgggagaggtg
gccttactacaggggaaccaccagatcgtggaaatgtgctaccagcgtaccaaaaacttt
gacaaactttccttcttgtaccttatcactggcaacctagagaaacttcgcaagatgatg
aagattgctgagatccgaaaggacatgagtggccattatcagaatgctctctacctggga
gatgtgtccgagcgagtgcggatcctgaagaactgtggacagaagtcactggcctatctc
acagctgctacccatggcttagacgaagaagctgagagcctgaaggagacatttgaccca
gagaaggagacaatcccagacattgaccctaatgccaagttgcttcagccacctgcacct
atcatgccattggataccaactggcccttattgactgtgtccaaagggttctttgagggc
tccattgccagcaaggggaagggaggcgcgctggctgctgacatcgacattgacactgtt
ggtactgagggctggggagaggatgccgagctgcagctggatgaagatgggtttgtggag
gctacagaaggtttgggggatgatgctcttggcaagggacaagaagaaggaggtggctgg
gacgtggaagaagatctggagcttcctcctgagctggatataccctctggggcagctggt
ggagctgaggatgggttctttgtgcccccaaccaagggaaccagcccaactcagatctgg
tgtaataactctcagcttccagttgatcacatcctggccggctcttttgaaacagccatg
cgactccttcatgaccaagtaggggtaacccagtttggcccctacaagcaactgttcctg
cagacctatgctcgaggccgtaccacctatcaggctctgccctgcctgccctccatgtat
ggctatcctaatcgcaattggaaggatgcagggctgaagaatggtgtaccagctgtgggc
ctgaagcttaatgacctcatccagcggttgcagctgtgctaccagctcaccacagttggc
aagtttgaggaggctgtggaaaaattccgttccattttactcagtgtgccacttcttgtt
gtggacaataaacaagagattgcagaggctcagcagcttatcaccatttgccgtgagtac
attgtgggtttgtccatggagatagaaaggaagaaactgcccaaagaaactctagaacag
cagaagcgcatctgtgagatggcagcctatttcacccactcaaacctgcagccagtgcac
atgatcctggtgttgcgtacagccctcaacctcttcttcaagatcaagaactttaagact
gctgccacctttgctcggcgcctgttggaacttggacccaagccggaggtggctcaacag
acccgcaaaatcctgtctgcctgtgagaaaaaccctacggatgcctatcagctcaattat
gacatgcacaaccctttcgacatctgtgctgcatcttatcggcccatctaccgtggaaag
ccagtggagaaatgtccgctcagtggggcctgctattcccctgagtttaagggtcagatc
tgcaaggtcactacagtgacagagattggcaaagatgtgatcggtttgaggatcagccct
ctgcagtttcgctga

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