Capricornis sumatraensis (Sumatran serow): 138073656
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Entry
138073656 CDS
T10522
Name
(RefSeq) vascular cell adhesion protein 1-like isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04064
NF-kappa B signaling pathway
csum04514
Cell adhesion molecules
csum04668
TNF signaling pathway
csum04670
Leukocyte transendothelial migration
csum04933
AGE-RAGE signaling pathway in diabetic complications
csum05143
African trypanosomiasis
csum05144
Malaria
csum05417
Lipid and atherosclerosis
csum05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
138073656
04668 TNF signaling pathway
138073656
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
138073656
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
138073656
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
138073656
05143 African trypanosomiasis
138073656
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
138073656
05418 Fluid shear stress and atherosclerosis
138073656
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
138073656
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csum04515
]
138073656
04090 CD molecules [BR:
csum04090
]
138073656
04091 Lectins [BR:
csum04091
]
138073656
Cell adhesion molecules [BR:
csum04515
]
Immunoglobulin superfamily
VCAM
138073656
CD molecules [BR:
csum04090
]
Proteins
138073656
Lectins [BR:
csum04091
]
I-type lectins (Siglecs)
138073656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
C2-set
ig
Ig_2
V-set
Ig_6
Ig_4
C2-set_2
ICAM1_3_5_D2
ICAM_N
Ig_5
C2-set_3
Adhes-Ig_like
C1-set
TrkA_C
Motif
Other DBs
NCBI-GeneID:
138073656
NCBI-ProteinID:
XP_068821595
LinkDB
All DBs
Position
2:complement(143610656..143633720)
Genome browser
AA seq
735 aa
AA seq
DB search
MLRKMFVIFGISDILWMVFAVSQAFKVDMFPNEYKIFAQIGDSVSLTCSATGCESPSFSW
RTQIDSPLNGKVKNEGTTSTLIMDPVSFGNEHQYLCTVTCKDMKREKAIRVEIYSFSKDP
EIHLSRPPEVGKPVTVTCSVPDVYPFERLEIEFLKGNRSMKVQEFLEPSEKKAQETKSLE
VTFSPTDEDIGKALVCQATLHIYDDDSPPKERKTTKELEVYISPKDTAVSVNPSTRLQEG
DSVTMTCTSAGLPAPRILWSKKLDNGNLQLLSENATLTLISIRAEDSGIYVCEGDNPVGK
DRKEVKLIVQERNFTVEISPGPQIAAQIGHSVVLTCDVRDCESPSFSWRTQIDSPLNGKV
RSEGSKSTLTLSPVSVENEHFYLCTVTCGQKKLEKRIQVKPYSFPSDPEIEMSGPLVSGN
PVTVSCKVPNVYPFDRLEMELFKGESIMMNKVFSKDVSKKALETKSLEKTFIPTAEDTGN
VLVCLARLPIDEMEFELKQRQSTQTLYVNVAPRDTTILVSPSSILEEGSSVNMTCSSNGL
PAPKILWSRQLSNGNLQPISENETLTFMATKMEDSGIYVCEGINQVGISRKEVKLIIQVA
PKDIQLTAFPSESVKEGDTVIISCTCGNVPPTLVILKKKAETGYTVLKSTGGAYTIHRAQ
LEDAGVYQCESKNEVGSQLRSLTLDVKGRESNKDYFSPELLVLYCAFFLIIPAIGMIIYF
ARKASMTGSYSLVEA
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcttaggaagatgtttgtgatctttggaatctcagatatactttggatggtgtttgca
gtttctcaagctttcaaagttgacatgttcccaaatgaatacaaaatttttgctcagatt
ggtgactctgtttcactgacttgtagcgcaacaggctgtgagtctccatcattttcttgg
agaactcagatagacagtccactgaatggaaaggtgaaaaatgaggggaccacatccacg
ctgatcatggatcctgttagtttcgggaatgaacaccagtacctgtgcacagtgacttgc
aaggatatgaaacgggagaaagcaatccgagtggagatctactctttctctaaggatcca
gagattcatctgagtagacccccagaggtcgggaagccagtcacagtcacgtgttcggtg
cctgatgtttacccatttgaaaggctggagatagagttcctgaaaggcaaccgttccatg
aaagtacaggaatttctggagccttcagaaaaaaaggcccaggaaacaaagagcttggaa
gtgaccttctcgcccactgatgaggatattgggaaagctcttgtttgtcaagctacatta
cacatttatgatgatgattctccacccaaagaaaggaaaactacaaaagaactggaagtc
tacatctcacccaaagacacagctgtatccgtgaatccctccacaaggctgcaggaaggc
gactctgtgacgatgacgtgtaccagtgcaggtctaccagctccacggattctctggagc
aagaaattagacaacgggaatctacagctcctttctgagaatgcaactctcactttaatt
tctatcagggcagaagattctgggatttatgtgtgtgaaggagataaccctgttgggaaa
gacagaaaagaggtgaaattaattgttcaagagagaaactttactgttgagatctctcct
ggaccccagattgctgctcagattggccactcagtcgtgttgacttgtgatgtcagggac
tgcgagtccccatctttctcttggagaacccagatagacagccctctgaacgggaaggtg
aggagcgagggctccaagtccacgttgaccctgagccctgtgagtgtcgagaacgaacat
ttctacctgtgcactgtgacatgtgggcaaaagaaactggaaaagagaatccaggtgaag
ccctactccttccctagtgatccagaaattgaaatgagtggtccgttagtgagtggaaac
ccagtcactgtaagctgcaaggttcctaatgtgtatccttttgaccggctggagatggaa
ttgtttaaaggggagagtattatgatgaataaagtcttctcgaaagatgtaagtaagaaa
gccctagagaccaagagtttggagaagaccttcatccccactgctgaagatactggaaat
gttcttgtttgtctggctcggttaccaattgatgaaatggaatttgaactcaaacaaagg
cagagtacacaaacactctatgttaatgttgctcccagggatacaaccatcttggtcagt
ccctcctccatcctggaggaaggtagttctgtgaatatgacatgctctagcaatggcctt
ccagctcccaaaatcttgtggagcaggcagctaagtaatgggaatctacagcctatttct
gagaatgaaactctcaccttcatggctacaaaaatggaagattctggtatttatgtctgt
gaaggcattaaccaggttggaataagcagaaaagaagtcaaattaattatccaagttgct
ccaaaagatatacaacttacagcttttccctctgagagtgtcaaggaaggagacactgtc
attatctcctgtacgtgtggaaatgttcccccaactttggtaattctgaagaaaaaagca
gagactggctacacagtgctaaaatctacaggtggtgcctataccatccacagggctcag
ttagaggatgcaggagtataccagtgtgaatctaaaaatgaagttggctcacagctaaga
agcctaacacttgatgttaaaggaagagaaagtaacaaggactatttttctcctgaactt
ctggtactttattgtgcattcttcttaataatacctgccattggaatgattatttacttt
gctagaaaagccagcatgacagggtcatatagtcttgtagaagcatag
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