Capricornis sumatraensis (Sumatran serow): 138075240
Help
Entry
138075240 CDS
T10522
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin 2/2L
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum05014
Amyotrophic lateral sclerosis
csum05017
Spinocerebellar ataxia
csum05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
138075240 (ATXN2L)
05017 Spinocerebellar ataxia
138075240 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
138075240 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csum03019
]
138075240 (ATXN2L)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
138075240 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
138075240
NCBI-ProteinID:
XP_068822925
LinkDB
All DBs
Position
3:16122477..16133988
Genome browser
AA seq
1111 aa
AA seq
DB search
MLKPQPPQQTSQPQPPPTQQAVARRPPGGTSPPNGGLPGPLASTSAPPGPPAAASPCLGP
AAAAGSGLRRGAEGILAPQPPPPQQQHQERPGAAAIGSARGQSTGKGPPQSPVFEGVYNN
SRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKVSEPAGGPRREDIV
DTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDD
YDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLA
REIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLAAREGKYIPLPQRVREGP
RGGVRCSSSRGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGAK
TLSSPSSRPSGEASVPPPPAAVTNTNPSPFSSVGRMYPPRSPKSAAPAPISASCPEPPMG
SAVPTSSASIPVTSAVGDPGVGSISPASPKISLAPTDVKELPAKEPGRTLESQELSRIAG
KVPGLQNEQKRFQLEELRKFGAQFKLQPSSSPETSLDPFPPRILKEEAKGKEKEVDGLLA
SEPLGSPVSSKAESVSDKEDKPPLPPAGAAEGPEQPPQPCPSQTGSPPVGLIKGDDKDEG
PVAEQVKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSP
QYISYIPQIHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMM
QAAAAAAGPPLVAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTS
GSHPQAIVSSSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPPSQ
HAAPSPVQHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYA
IHAHQQLPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVP
QSGVPALSASTPSPYPYIGHPQGEQPGQAPGFPGGADDRILCRVGRSHSRRRQGLAPGSV
LCFPPSSLSCDPAAPLPTASPALSDPDCLLT
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacagcagacctcccagccccagccgccccccacgcaacag
gccgtggcccgtcgccctcccgggggcaccagcccgcccaacggcggtctcccggggccc
ctggcctccacctcggctcccccaggacctcctgcggccgcctccccctgcctggggcct
gcagccgctgccgggagcgggctccgccggggagccgagggcatcttggcgcctcaaccg
ccgccaccgcagcagcaacatcaggagaggccaggggcagcggccatcggcagcgccagg
ggacaaagcacaggaaagggacctccacagtcaccggtgtttgagggtgtctacaacaat
tccagaatgctgcacttccttaccgcggttgtgggttctacttgtgatgtaaaggtgaag
aacggtaccacctacgagggtatcttcaagacgctgagctcaaagtttgaactggcagtg
gatgctgtgcaccggaaggtatcggagccagcgggtggccctcgtcgggaagacatagtg
gacaccatggtgtttaagccaagtgatgtcatgcttgtccacttccgaaatgtcgacttc
aattatgctactaaagataagttcactgactcggccattgccatgaactcgaaggtgaat
ggggagcacaaggagaaggtgcttcagcgctgggaggggggagacagcaacagcgatgac
tacgacctggagtctgacatgtctaatggatgggaccccaacgaaatgttcaagttcaat
gaggagaactatggtgtaaagaccacctatgacagcagtctctcttcttacacggtgccc
ttagagaaggacaattcagaagaattccgtcagcgggagctgcgtgctgcccagttggcc
cgagagattgaatcgagcccccagtaccgcctccggatcgccatggagaatgatgatggg
cgcacggaggaggagaagcacagtgcggttcagcgacagggctcagggcgtgagagcccc
agcttggcagccagggagggaaagtatatccctctaccccagcgagttcgggaaggtccc
cggggaggtgttcgctgcagtagttctcggggcggccggcctggccttagctctttgccg
ccccgtggccctcaccatcttgacaatagcagccctggcccaggttctgaggcacgtggt
atcaatggaggcccttcccgcatgtcccctaaggcccagcgacctctgagaggtgccaag
actctgtcttcccccagcagcaggccttctggagaagcctctgttccacctcctcctgca
gcagtgaccaacacaaatccctctcccttttcttcagtgggccggatgtacccgccgcgc
tctcccaagtcagctgcccctgccccaatctcagcttcctgtcctgagcctcccatgggc
tcagcagtaccaacctcttcagcttccatcccagtgacatcagcagttggggatcctgga
gtaggctccatttccccagcttctccaaagatctcactggcccccacagatgtaaaagaa
ctcccggccaaggaacctggaaggaccctggagtcccaggagttgtcccggattgcaggg
aaagtccctggccttcagaatgaacagaagcgttttcaactggaagaactgagaaagttt
ggggcccagtttaagcttcagcccagtagctcccctgagaccagcttggatccttttcct
ccacggatcctgaaagaggaagccaaagggaaggagaaggaggtggatggtcttttggct
tcagagcccctggggtctcctgtttcctcaaaggctgaatcagtatcagacaaggaggac
aaaccacccctgccaccagcaggggctgccgaggggccggagcagcctccccaaccttgc
ccaagccaaactggcagccccccagtgggcctcatcaagggagatgacaaggatgagggc
ccagttgccgaacaagtgaagaagtcaacattgaaccccaatgccaaggagttcaacccc
actaagcccctgctctctgtgaataaatccaccagtactccaacttctcctgggccccga
actcactcaactccctccatcccggtgctgacagcaggccagagtgggctctatagcccc
cagtacatctcctacatacctcagatccacatgggaccagctgttcaggcaccgcagatg
tatccgtatcctgtgtccaactcagtgcctggacagcagggcaagtaccggggcgccaaa
ggctccctgcccccgcagcgctcggaccaacaccagccagcctccgcccctcccatgatg
caggctgccgccgccgccgctggtccacctctggtggccgccaccccttactcttcctac
atcccctacaacccacagcagttcccaggccagcccgccatgatgcagcccatggcccac
tacccctctcagccggtgtttgcccccatgcttcaaagcaacccacgcatgctgacgtcg
gggagccatccccaggccatcgtgtcatcctccacccctcagtacccttctgcagagcag
cccaccccccaggccctttatgccactgttcaccagtcctatccacaccatgccacgcag
ctccatgcccaccagccgcagccggccaccacacctactgggagccagccaccgtcccag
catgcggcccccagtcctgtccagcaccaggcggggcaggccccacacctgggcagtgga
cagccgcagcagaacctgtaccacccaggggccctgacaggcacgccgccttctctgcca
ccgggaccttctgcccagtcccctcagagcagcttcccccaaccagccgctgtatatgcc
atccatgcccaccagcagctgccccacggcttcaccaacatggcccatgttacccaggcc
catgtccaaactggaatcacagcagccccgccccctcaccctggggctccccacccgccc
caggtgatgctgctgcacccaccccagagccatgggggccccccccaaggcgcggtgccc
cagagtggggtgcctgcactctcagcttccacaccctcaccctacccctacatcggacac
ccccaaggtgagcagcctggccaggcgcctggatttccaggaggagccgatgacaggatt
ctatgtagggtgggcagaagccacagtcgccgccgccaggggcttgctcctggctctgtc
ctttgcttccctccgtcctcgctcagttgtgatccagcagcccccctccccactgcctcc
ccagctctcagtgaccccgactgtctcctgacttag
DBGET
integrated database retrieval system
