Capricornis sumatraensis (Sumatran serow): 138075246
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Entry
138075246 CDS
T10522
Symbol
SCN9A
Name
(RefSeq) sodium channel protein type 9 subunit alpha isoform X1
KO
K04841
voltage-gated sodium channel type IX alpha
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
138075246 (SCN9A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csum04040
]
138075246 (SCN9A)
Ion channels [BR:
csum04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
138075246 (SCN9A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Lustrin_cystein
DUF6739
Motif
Other DBs
NCBI-GeneID:
138075246
NCBI-ProteinID:
XP_068822962
LinkDB
All DBs
Position
3:74409294..74499114
Genome browser
AA seq
2000 aa
AA seq
DB search
MAMLPPPGPQSFVFFTKQSLALIEQRIAEGKAKEPKEEKKDDDEEGPKPSSDLEAGKQLP
FIYGDIPPGMVSEPLEDLDPYYADKKTFIVLNKGKAIFRFNATPALYMLSPFSPLRRISI
KILVHAAFSMLIMCTILTNCIFMTMSNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGE
FTFLRDPWNWLDFIVIVFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGNLKHKCVQTSLANNETIEDILNTLDEEEYAS
KNTSVVANSYSNEYDWKEYIKDYEYFYYLEGSKDALLCGFSTDSGQCPEGYTCKKIGRNP
DYGYTSFDTFSWAFLALFRLMTQDYWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLI
LAVVAMAYEEQNQANIEEARQKELEFQQMLDRLKKEQEEAEAIALAAAEYTSIGRSRIMG
LSESSSETSKLSSKSAKERRNRRRKKNQKKLSSGEEKGDDEKLSKSESEESIRRKSFHLG
VEGHRRAREKRLSTPNQSPLSIRGSLFSARRSSRTSLFSFKGRGRDIGSETEFADDEHSI
FGDNESRRGSLFVPHRPRERRSSNISQASRSPPVLPVNGKMHSAVDCNGVVSLVDGPSAL
MLPNGQLLPEGTTNQIYKKRRHSSYLLSEDMLNDPNLRQRAMSRASILTNTVEELEESRQ
KCPPWWYRFAHTFLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPM
TEEFKNVLVVGNLVFTGIFAAEMVLKLIAMDPYEYFQIGWNIFDSLIVTLSLVELFLSDV
EGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLF
GKSYKECVCKINEDCKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVY
MMVMVIGNLVVLNLFLALLLSSFSSDNLTAIEEDTDANNLQIAVARIKTGINYVKQTLRE
FVLKAFSKKPKISKEIRQTEDLNCKKENYISNRTLAEMSKDHNFHKEKDKTSGFGNNTDK
YLMEESDGQSFIHNPTLTVTVPIAPGESDLEIMNTEELSSDSDSEYSKGRLNRSSSSECS
TVDNPVPGEGEEAEAEPVNSDEPEACFTDGCVQRFPCCQVNIESGKGKIWWNIRKTCFRI
VEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILEMLLKWVAY
GYKTYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMR
VVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYECINTTNGLRFPTNEVENRS
ACLALMNVSQNVRWKNLKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSVNVDKQPIYE
YSLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKL
GSKKPQKPIPRPGNKFQGCIFDLVTNQAFDIAIMVLICLNMVTMMVEKEGQSEYMTEVLY
WINVVFIILFSGECVLKLISLRCYYFTVGWNIFDFVVVILSIVGMFLADLIERYFVSPTL
FRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAY
VKKEAGINDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPKKVHPGSSVEG
DCGNPSVGIFYFVSYIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEK
FDPDATQFIEYSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKR
VLGEGGEMDSLRSQMEERFMSANPSKVSYEPITTTLKRKQEDVSATVIQRAYRRYRLRQH
VKNISSIYIKDGDRDDDLPNKEHMVFDNVNENSSPEKTDATPSTVSPPSYDSVTKPDREK
YEKDKTEKEDKGKDGKEGKK
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgttgcctcccccgggacctcagagctttgtcttcttcacaaaacagtctctt
gccctcattgaacaacgtattgctgaaggaaaagcaaaggaacccaaagaagaaaagaaa
gacgatgacgaagaagggccaaagccaagcagtgacttggaagccggcaaacagctgccc
ttcatctatggggacattcctccgggcatggtgtcagagcccctggaggacttggaccct
tactatgcagacaaaaaaacgttcatagtgttgaacaaagggaaagcaatcttccgtttc
aatgccacacctgctttgtacatgctctctcctttcagtcctctcagaagaatatctatt
aagattttagtacatgccgcattcagcatgcttatcatgtgcactattttgacgaactgc
atatttatgaccatgagtaatcctccagactggaccaagaatgtagagtacacttttact
ggaatatatacttttgagtcacttgtgaaaatccttgcaagaggattctgtgtaggagaa
ttcacttttcttcgtgacccatggaactggcttgatttcatagtcattgtctttgcatat
gtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcagagttctccga
gctttgaaaacaatttcagtcattccaggcctgaagaccatcgtgggggccctgatccag
tctgtgaaaaagctgtcagatgtcatgatcctgactgtgttctgtctgagcgtgtttgcc
ctgattgggctgcagctctttatgggcaacctgaagcataaatgtgtgcagacttcactt
gcaaataatgaaacaatagaagacatattgaataccctcgatgaagaagaatatgcaagt
aagaatacctctgtagttgctaatagctacagcaatgagtatgactggaaagagtatatc
aaggattacgaatatttttattacttggagggatccaaagatgctctcctttgtggtttc
agcaccgattcaggtcagtgtccagaagggtacacctgtaagaagattggcagaaatcct
gactatggctacacgagcttcgatactttcagttgggccttcttagccttgtttcggcta
atgacccaggattactgggaaaacctgtaccaacagaccctgcgtgctgctgggaaaacc
tacatgatcttctttgtcgtggtgattttcctgggatccttttatctaataaacttgatc
ttggctgttgttgccatggcctatgaagaacagaaccaggccaacattgaagaagcgagg
cagaaagagttggaatttcagcagatgctagatcgacttaaaaaagagcaagaggaagct
gaggcaatagcattagcagcagctgaatataccagcattgggagaagcagaataatgggt
ctctctgagagttcttctgaaacatccaaactgagctctaaaagtgctaaagaaagaaga
aacaggagaaggaaaaagaaccaaaagaaactctccagtggggaagaaaagggagatgat
gagaaactgtccaaatcggaatccgaggagagcatcaggagaaaaagtttccaccttggt
gttgaaggtcataggcgagcacgtgagaaaagattgtctacccctaaccagtcaccactc
agcatccgaggctccttgttttctgcaaggcggagcagcagaacaagtcttttcagcttc
aaaggtcgaggaagagatattggatctgagactgaatttgccgatgacgagcacagcatc
tttggcgacaacgagagcagaaggggctccctgtttgtgccccacagacctcgggagcgg
cgcagcagtaacatcagccaagctagtaggtctcccccagtgctgccagtgaatgggaag
atgcacagcgctgtcgactgcaacggcgtggtctccttggtggatggaccctccgccctc
atgctacccaatggacagctcctgccagagggtacaaccaatcaaatatacaagaaaaga
cgtcacagttcttacctcctttctgaggatatgttgaatgaccccaatctcagacaaagg
gcaatgagtagggcaagcatattaacaaacactgtagaagaacttgaggagtccagacag
aaatgtccaccttggtggtacagatttgcacacacattcttgatctggaattgctctcca
tattggataaaattcaaaaaatttatctattttattgtaatggatccttttgtagatctt
gctattaccatttgcatagttttaaacacattgttcatggctatggaacatcacccaatg
actgaggaattcaaaaatgtgctcgttgtgggaaatttggtctttactggcatctttgca
gctgaaatggttttaaaactaattgccatggatccatatgagtatttccaaataggatgg
aatatttttgatagtcttatcgtaaccttaagcttagtggaactttttctgtcagatgtg
gaaggattgtcagttctacgatcattcagactgctccgagttttcaagttggcaaaatct
tggccaacactgaacatgctgatcaagatcatcggcaattcagtgggggctctgggaaac
ctcaccctggtgttggccatcatcgtcttcatatttgctgtggttggcatgcagctcttt
ggtaagagctacaaagaatgtgtttgcaagatcaatgaagactgcaaactccctcgctgg
cacatgaacgacttcttccactccttcctgattgtgttccgggtgctgtgtggagagtgg
atagagaccatgtgggactgcatggaggtcgccgggcaagccatgtgccttattgtttac
atgatggtcatggtcattggaaacctggtggtcctcaacctatttcttgctttattactg
agctcatttagttcagacaatcttacagcaattgaagaagacactgatgcaaacaacctg
cagattgcagtggccagaattaagacgggaataaattatgtgaaacaaaccttacgtgaa
tttgttctaaaagcattttccaaaaagccaaagatttccaaagagataagacaaacagaa
gacctaaattgtaaaaaggaaaactacatctctaaccgcacgcttgctgaaatgagcaag
gatcacaatttccacaaagaaaaagataaaaccagtggttttggaaacaacacggacaaa
tacttaatggaagaaagtgatggtcaatcatttattcataatcccaccctcacagtgaca
gtgcccattgcacctggggaatctgatttggaaattatgaacactgaggaacttagcagt
gattcagatagcgaatacagcaaagggaggctgaaccgatcaagttcctcagagtgcagc
acagttgataaccctgtgcctggagaaggagaagaggcagaggctgagcctgtaaattca
gatgagccagaggcctgtttcacagatggttgcgtacagaggttcccatgctgtcaagtc
aacatagaatcagggaaaggaaaaatctggtggaacatcaggaaaacctgcttcaggata
gttgagcacagttggtttgaaagcttcattgttctcatgatcttgctcagcagtggtgct
ctggcttttgaagatatatatattgaaaagaaaaagaccattaagattatcctggagtat
gctgacaagatattcacttatatcttcattctggaaatgcttctaaaatgggtcgcatat
ggttacaaaacctatttcaccaatgcctggtgttggctggatttcttaattgtcgatgtt
tctttggttacattagttgcaaacactcttggctactcagatcttggtcccattaaatcc
ctccggacacttagagctttaagacctctgcgagctttatctagatttgaaggaatgagg
gtggttgtgaatgcactcatcggtgcaattccttctatcatgaatgtgctgcttgtgtgt
ctcatattctggctgatattcagcatcatgggagtaaatttgtttgctgggaagttttat
gagtgtattaacaccacaaatggactacggtttcctacgaatgaagttgaaaaccgttct
gcctgtcttgcgcttatgaatgttagtcagaacgtgcgatggaaaaacctaaaagtgaac
tttgataatgttggacttggttacctgtctctacttcaagtggcaacatttaagggatgg
atggatattatgtatgcagcagttgattctgttaacgtagacaagcagcccatttatgaa
tacagcctctacatgtatatttattttgtcatcttcatcatcttcgggtcattcttcact
ttgaacttgttcattggtgtcatcatagataatttcaaccaacagaaaaagaagcttgga
ggtcaagatatctttatgacagaagaacagaagaaatattataatgcgatgaaaaaactg
ggatccaagaaaccacaaaagccaatacctcggccagggaacaaattccaaggatgtatc
tttgacctagtaacaaaccaagcttttgatatagccatcatggttctgatctgcctcaac
atggtaaccatgatggtagaaaaagagggacaaagtgaatacatgactgaagttttatat
tggatcaatgtggtttttattatcctgttctctggagaatgtgtgctgaaactgatctct
ctcagatgctactacttcactgtaggctggaacatctttgattttgtggttgtaattctc
tccattgtaggtatgtttctggcagatttgatagaaaggtattttgtgtcccctacccta
ttccgagtgatccgtcttgccaggattggccgaatcctgcgtctgatcaaaggggccaag
gggatccgcacgctgctctttgctttgatgatgtcccttcctgcgctgtttaacatcggc
ctcctgctcttcctggtcatgttcatctatgccatctttggaatgtccaactttgcctat
gttaaaaaggaagctggaattaatgacatgttcaactttgagacctttggcaacagcatg
atctgcctgttccagattaccacctctgctggctgggatggattgctagcgcctatcctc
aacagtgcaccaccggactgtgaccccaaaaaagttcaccctggaagctcagttgaagga
gactgtgggaacccatctgtcgggatattctattttgtcagttacatcatcatatcattt
ctggtcgtggtgaatatgtacatcgctgtcatcctggagaacttcagtgttgctactgaa
gaaagtactgagcccctgagtgaggacgattttgagatgttctatgaggtttgggagaag
tttgatccagatgcgactcaatttatagaatatagcaaactctctgactttgcagctgca
ctggatcctcctcttctcatagcaaaaccaaacaaagtccagctcattgccatggacctg
cccatggtcagtggggacaggatccactgccttgacatcttatttgcttttacaaagcgt
gttttgggggaaggtggagagatggactctcttcgttcacagatggaagaaaggttcatg
tctgcaaatccttctaaagtgtcttatgagcccatcacaactacactaaaaagaaagcaa
gaggatgtgtctgctacagttattcagcgtgcttacagacgttaccgcttacggcaacat
gtcaaaaatatatcaagtatatacatcaaagatggtgacagagatgatgatttgcccaat
aaagaacatatggtttttgataatgttaatgagaactcaagtccagaaaaaacagatgca
actccatccactgtctctccaccttcatatgacagtgtaacaaaaccagacagagagaaa
tatgaaaaagacaaaacagaaaaggaagacaaagggaaagatggcaaggaaggcaaaaaa
tag
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