KEGG   Capricornis sumatraensis (Sumatran serow): 138075405
Entry
138075405         CDS       T10522                                 
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
  KO
K15542  polyadenylation factor subunit 2
Organism
csum  Capricornis sumatraensis (Sumatran serow)
Pathway
csum03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csum00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    138075405 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csum03019]
    138075405 (WDR33)
Messenger RNA biogenesis [BR:csum03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     138075405 (WDR33)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 Collagen WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_IFT122_1st eIF2A WD40_RFWD3 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR11_2nd Beta-prop_WDR41 Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 138075405
NCBI-ProteinID: XP_068823247
LinkDB
Position
3:49018309..49132456
AA seq 1335 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQG
FQQPHPSQQLSMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQG
PPQGLPRPQDMHGPQGIQRHPGPHGPLGPQGPPGPQGNAGPQGHMGPQGPPGPQGHIGPQ
GPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGMQGGPGSQGIQGPVSQGPLMGLN
PRGMQGPPGPRENQGPAPQGMMLGHPPQEMRGPHPPSGLLGHGPQEMRGPQEMRGMQGPP
PQGSMLGPPQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPI
PFQQQKTALLGDGPRAPFNQEGQNAGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSR
GPPNHHMGPMSERRHEQSSGPEHGPERGPFRGSQDCRGPPDRRGPHPEFPDDFSRPDDFH
PDKRFGHRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDARGAARGPPGAWEGR
RPGDDRFPRDPEDPRFRGRREESFRRGAPPRHEGRAPPRGRDGFPGPEDFGPEENFDASD
ETARGRDLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDAPR
PDHPPHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHREMDAPGGPSEDRGKG
RGGPGPSQRVPKSGRSSSLDGDHHDGYHRDEPFGGPPGSGTPSRGGRSGSNWGRGSNMNS
GPPRRGASRGGGRGR
NT seq 4008 nt   +upstreamnt  +downstreamnt
atggctacagaaattggttctcctccgcggtttttccatatgccaaggttccaacaccag
gcacctcgacaactgttttataagcgaccagattttgcacagcagcaagcaatgcagcag
cttacctttgatggaaaacgaatgagaaaagcagtaaaccgaaaaaccatagactataat
ccatctgtaattaagtatttggagaatagaatatggcaaagagaccagagagatatgcga
gcaattcagcctgatgcaggttattataatgatctggttccacctattgggatgttgaat
aatcctatgaatgcagtaacaacaaagtttgtccgaacatcaacaaataaagtaaaatgt
ccagtatttgttgtcaggtggactccagaaggaagaaggttggtcactggagcttctagt
ggggagttcaccttgtggaatggactcactttcaattttgaaacaatattacaggctcat
gatagcccagtgagagccatgacttggtcgcataatgacatgtggatgttgacagcagac
cacggaggatatgtgaaatattggcagtcgaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctc
cgagggcacggtgctgatgtgaagtgtgtagactggcatccaacaaaagggttagttgtt
tcaggaagtaaagatagtcaacagccaatcaagttctgggatcccaagactgggcagagt
cttgcaacacttcatgcccataaaaacacagtaatggaagtgaaattaaatctcaatggc
aactggctactcacagcatcacgtgaccacctctgtaaacttttcgacatccgaaatctg
aaagaagagcttcaagtcttccgaggtcataagaaagaagctacagctgtggcctggcat
cctgttcatgaaggactttttgccagtggagggtctgatggctctttgttattttggcat
gttggagtagagaaagaagtgggtggaatggagatggcccatgaaggaatgatctggagt
ctggcttggcatccccttggacatattctctgctcaggctcaaatgaccatactagcaaa
ttttggacccgaaaccgaccaggtgataaaatgcgagatcgatacaacctcaacctatta
cctggaatgtctgaagatggagtggaatatgatgaccttgagcctaacagtctggcagta
attccagggatgggaataccagaacaactaaaattagctatggaacaagaacagatgggg
aaagatgaatcaaatgaaattgaaatgacaattccaggtttagattggggaatggaggag
gtgatgcagaaggatcagaaaaaagtgcctcagaagaaggttccgtatgcaaaacctatc
cctgctcagttccagcaggcatggatgcaaaataaagttccaattcctgccccaaacgag
gtattgaatgacagaaaagaagacattaaattggaagagaagaaaaaaacacaagcagaa
atcgaacaagagatggccacattacagtacaccaacccacaacttttggagcaacttaaa
attgaaagacttgcacagaaacaggctgagcagattcagcctcctccttcatctggcacc
cctctcctgggaccccagccctttccaggacaaggtccaatgtctcagattcctcaaggt
tttcaacagcctcatccatctcagcagctgtcaatgaacatggctcaaatggggcctcca
ggtccacagggacagtttagaccccctggaccacagggacaaatgggaccacaaggccct
ccactgcatcagggaggtggggggccgcaaggattcatgggaccacaagggccccaggga
ccgccccaggggttgccaaggcctcaggacatgcatgggccccagggaatacaaaggcat
cctggacctcatggccctctgggacctcaaggaccacctggaccccagggtaatgctggt
cctcagggtcatatgggtcctcagggcccacctggcccacaaggtcacataggcccccaa
ggcccacctggtccccagggtcacttgggccctcagggacctcctggtactcaaggtatg
cagggaccacctggtcccagaggaatgcaaggacctccccatcctcacgggatgcaaggc
gggccagggtctcaagggatccaaggtcctgtgtctcagggacctctgatgggattgaat
ccaagaggaatgcagggtcctccaggtccccgagagaaccagggtcctgctccccaaggg
atgatgctgggtcacccacctcaagagatgagaggacctcatcctccaagtggactgctg
ggacatggccctcaggagatgcgaggtcctcaggagatgcgaggcatgcagggccctcca
ccccaaggatcgatgctgggccctccccaggaattgagggggcctccaggctcacaaggt
cagcaggggccgccccagggctctttgggacctccaccccagggtggcatgcaagggccc
cctggacctcagggacagcagaacccggcaagagggccacatccatctcaagggccaata
ccattccagcagcagaaaacagctctgctaggtgatgggccccgggcccccttcaaccag
gaaggacagaatgcaggccccccacccctgataccaggactagggcagcagggagcacaa
ggtcgcatcccccctcttaaccctggacaaggacctggccctaacaaaggtgattcgcgc
ggccctccaaaccatcacatgggcccaatgtcagagaggcggcacgagcagagcagcggc
cctgagcacggtcccgagagggggcctttccggggcagccaggactgcaggggtccccct
gataggcgcggccctcaccccgaattccctgatgacttcagcagaccagacgacttccac
cccgacaagcgctttggccaccggttacgagaatttgaggggcgaggaggccctttacca
caagaagagaagtggaggcgtgggggccctgggcctccgttcccccctgaccacagggag
ttcagtgagggggatgcccggggtgcagcccggggccccccaggggcctgggaaggccgc
agacctggagacgaccgcttcccccgggaccctgaggacccgcggttccgagggcgcaga
gaagaaagcttccgaagaggagcacccccaagacatgagggccgtgctccccccagagga
agagatggctttcctgggcctgaagactttggaccagaggagaattttgatgcttctgac
gaaacagcccgaggaagagatctcagaggtcgaggtcggggtaccccacgaggaggaagg
aagggtttgcttcccactcctgatgagttccctcgctttgaaggaggacggaaaccagac
tcctgggatggaaatagagagccagggccaggacatgaacacttccgtgatgctccccgc
cctgatcacccccctcatgatggtcattccccagctagcagagaacggtcctcttctctc
caaggcatggacatggcatctttaccaccccgaaagcgcccctggcatgatgggccggga
acctctgagcacagagaaatggatgccccaggaggtccttctgaggatcgaggcaaaggc
cgagggggcccaggaccttctcagagagtgcctaagtccggacgttccagctccttggat
ggagaccaccatgatggataccacagagatgaaccttttgggggccctccaggcagtggt
accccttctagagggggccgcagtggcagtaactggggtagagggagtaacatgaactct
ggcccaccaaggcgaggggcttcgagggggggtgggaggggtcggtag

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