Capricornis sumatraensis (Sumatran serow): 138075592
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Entry
138075592 CDS
T10522
Symbol
WIPI2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04136
Autophagy - other
csum04140
Autophagy - animal
csum05010
Alzheimer disease
csum05014
Amyotrophic lateral sclerosis
csum05016
Huntington disease
csum05017
Spinocerebellar ataxia
csum05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138075592 (WIPI2)
04136 Autophagy - other
138075592 (WIPI2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
138075592 (WIPI2)
05014 Amyotrophic lateral sclerosis
138075592 (WIPI2)
05016 Huntington disease
138075592 (WIPI2)
05017 Spinocerebellar ataxia
138075592 (WIPI2)
05022 Pathways of neurodegeneration - multiple diseases
138075592 (WIPI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csum04131
]
138075592 (WIPI2)
03029 Mitochondrial biogenesis [BR:
csum03029
]
138075592 (WIPI2)
Membrane trafficking [BR:
csum04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
138075592 (WIPI2)
Mitochondrial biogenesis [BR:
csum03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
138075592 (WIPI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
DUF7165
Beta-prop_RSE1_2nd
BCAS3_WD40
Beta-prop_Vps41
DUF7099
Beta-prop_IFT140_1st
RMC1_N
VID27
Motif
Other DBs
NCBI-GeneID:
138075592
NCBI-ProteinID:
XP_068823550
LinkDB
All DBs
Position
3:3150550..3175217
Genome browser
AA seq
436 aa
AA seq
DB search
MNLASQSGEAGASQLLFANFNQDVTSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPTGLCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
DGMFLSASSNTETVHIFKLETVKEKPQEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGR
AFATVRLPFCGHKNICALATIQKIPRLLVGASDGYLYMYNLDPQEGGECTLMKQHQLDGS
METTNEILDSTSHNCPLVTQAYGAAVPKGPHVPSSPTALAYTDELGAAGGSGLEDEASAL
RLEDDSEHPPMILRTD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggcgagtcagagcggcgaggccggcgctagccagctgctcttcgccaacttc
aaccaggacgtcacgtctctagccgttggtagtaagtccgggtataaatttttctccctt
tcttctgtggataaactggagcagatctatgaatgcactgacactgaagatgtgtgcatc
gtggagagattgttctccagcagcttggtggccatcgtcagcctcaaagctcccaggaag
ctgaaggtttgccactttaagaaagggaccgagatctgcaactacagctactccaacacc
atcctggcggtgaagctcaacaggcagaggctgatcgtgtgcctggaggagtctctctac
attcacaatatccgggacatgaaggtgctgcacaccatccgggagacgcccccgaacccc
accggcctgtgtgcgctgtccatcaacaatgacaactgttacctggcgtatccgggcagc
gccaccatcggagaggtgcaggtcttcgacaccatcaacctgagagctgcgaacatgatc
ccggctcacgacagcccgttagccgccctggccttcgacgccagcggaaccaagcttgcc
actgcttccgagaaggggaccgtgattagggtgttttccattccagaaggacagaagctc
ttcgagttccggagaggagtgaagaggtgtgtgagcatctgctccctggccttcagcatg
gacggcatgttcctgtccgcctccagcaacactgagactgtgcacatcttcaaactcgag
actgtgaaggaaaagcctcaggaggagcccaccacctggaccggctacttcgggaaggtg
ctcatggcgtccaccagctacttgccctcccaggtgacggagatgttcaaccagggcagg
gccttcgccacggtgcgcctgcctttctgtggccacaagaacatctgcgcactggccaca
atccagaagatccctcggctgctggtgggcgcctcggacgggtacctgtacatgtacaac
ctggacccccaggaagggggcgagtgcaccctcatgaagcagcaccagttggatggcagc
atggagacaaccaacgagatcctggactccacctcccacaactgccccttggtgacgcag
gcgtacggcgcggccgtgcccaagggtccgcacgtgccttcgtccccgacggcgctggcc
tacacggacgagctgggtgccgcgggcggctcggggctggaggacgaggccagcgccctg
cggctggaggatgacagcgagcaccctcccatgattctgcggacggactga
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