Capricornis sumatraensis (Sumatran serow): 138075806
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Entry
138075806 CDS
T10522
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04612
Antigen processing and presentation
csum05145
Toxoplasmosis
csum05152
Tuberculosis
csum05164
Influenza A
csum05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
138075806 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
138075806 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
138075806 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
138075806 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
138075806 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csum01001
]
138075806 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csum04054
]
138075806 (CIITA)
Enzymes [BR:
csum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
138075806 (CIITA)
Protein kinases [BR:
csum01001
]
Serine/threonine kinases: Other
TAF1 family
138075806 (CIITA)
Pattern recognition receptors [BR:
csum04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
138075806 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_14
NB-ARC
LRR_9
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
138075806
NCBI-ProteinID:
XP_068823929
LinkDB
All DBs
Position
3:complement(32598018..32623843)
Genome browser
AA seq
1058 aa
AA seq
DB search
MELGPLEGSYLELLNSSADPLQLYHLYDRMDLTGEEEIDLCSEPDTDTINCEQFSRLLCD
IEGDEETREAYANIAELDQYVFQDTQLEGLSKDIFIEHIGLEEMTSESVEVLEEAGQKSQ
KRPFPEELPVDLKHRKLAPPSSSLLSCLSLPMGPIQIIPTLSTLPQGLWPISGTGTGVSS
ILIYQSEMPPASQTPPASRPAVQSLPKSPDRPGSTSPFAPSAADLPSMPEPALTSRANLT
EDEISPTKCPAAGGASSKLPKWPESVEQFYQSLRDRYQAQPVGPEGTLVEMDLVRVRLEK
SSGKSQERELATLDWAERQPARGGLAEVLLAASDRQQPRETRVIAVLGKAGHGKSHWARA
VSRAWAHGQLPQYDFVFWVPCHRLDRLGTSYRLQDLLSSLGPQPLLVNDEVLSYIARRPN
RILLILDGFEELEAHDGSLHSTGGPGLAEPRSLRGLLAGLLQRKLLRGCTLLLTAWPRGR
LAQSLSKADALFEVAGFSAQQAETYVKCYFESEGTAEHQERALALLRAQPFLLSHSHSPT
VCRAVCQLTEALLQRSDEAQLPSTLTGLYVGLLGPAARGGPPGALAGLARLAWELGRAHQ
RGLKAGCFPSAEARAWAVAQGWLRPTPGAPETELAFSSFLLQCFLGAVWLALSGEIKDKE
LPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRAGCLGALAGPAASTSVDRKQKVLTRY
LKRLQPGTLRAGRLLELLHCAHEALDPGLWQHVLQGLPARLSFLGTRLTPPDTHVLGSAL
EAAGQDFSLDLRGTGIDPSGLGSLVGLSCVTRFRAALSDTVELWESLQQRGEAKLLRAVE
EKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSSEAAAGELPAVRDLKKLEFALGPVLGPQV
FPKLVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDVGA
CKLAEALPALAKSLLRLSLYNNCICDAGAESLAHVLPDMVSLRVLDVQYNKFTAAGAQQL
AAGLRKCPQVKTLAMWTPTIPFGVQEHLQQLDPRIILR
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggagctgggacctctagaaggcagttacttagaacttctcaacagcagtgctgaccct
ttgcagctctaccacctctacgaccggatggatctgacaggagaagaagagatagatctc
tgctcagagcctgacacagacaccatcaactgcgaacagttcagcaggctgttgtgtgac
attgaaggtgatgaagagaccagggaggcttatgccaatatcgcggaattggaccagtac
gtcttccaggacactcagctggagggcctgagcaaagacattttcattgagcacatagga
ttggaagaaatgaccagcgagagtgtggaggtgctggaggaagcagggcagaaaagtcag
aaaagacccttcccagaggagctgcctgtggatctgaagcaccggaagctagcacctcct
tccagttccttgttgagctgcctgagtcttcccatgggacccattcagattatccccact
ctctccactctgccccaggggctctggccgatctcagggactgggacaggggtctccagt
atactcatctaccaaagtgagatgcccccggccagccaaacacccccggccagcaggcct
gctgtccagagccttcccaagtccccagaccggcctggctccaccagcccctttgccccg
tctgccgctgacctcccgagcatgcctgaaccagccctgacctcccgtgcaaacctgaca
gaggatgagatatcccccaccaaatgcccagcagctggcggggcctccagcaaacttccc
aagtggcctgagagcgtggagcagttctaccagtcgctacgggacaggtaccaggcccag
cccgtcggcccagaaggcaccctggtggagatggacctggtgagggtgaggctggagaag
agcagcgggaagagccaggagagagagctggctaccctggactgggcagagcggcagccg
gcccgagggggtctggccgaggtgctgctggctgccagcgaccgccagcagccccgagag
acgcgggtgatcgctgtgctgggcaaagcgggacatgggaagagtcactgggcccgggcc
gtgagccgggcctgggcccacggccagctgccccagtacgactttgtcttctgggtcccc
tgccaccgtttggaccgtctggggacctcctaccgcctgcaggatctgctttcctccctg
ggcccgcagccgctgctggtgaacgacgaggtcctcagttacatcgcaaggaggcccaac
cgcatcctgctcattctggatggctttgaggagctggaagcccacgacggctccctacac
agcacagggggccccgggttggcagagccccgctccctccgggggctgctggctggcctc
ctccagcgcaagctgctgcggggctgcaccctgctgctcacggcctggccccggggccgc
ctggcccagagcctgagcaaggcggatgccctgttcgaggtggctggcttctcggcccag
caggctgagacctacgtgaagtgttactttgagtcggaggggaccgccgagcaccaagag
agggccctggcacttctgcgggcccagccgttcctcctgagccatagccacagccccacc
gtgtgccgggccgtgtgccagctcacggaggccctcctgcagcggagtgatgaagcccag
ctgccctccacgctcacaggcctctatgtgggcctgctaggcccagcagcccgcggtggc
cccccgggggctctggcaggactggccaggctggcctgggagctgggccgtgcgcaccag
aggggcctgaaggcaggctgcttcccgtcggcggaggcaagggcctgggctgtggcccaa
ggctggttgcggcccactccgggggctccggagacagaactggccttctctagcttcctc
ctgcagtgcttcctgggggccgtgtggctggctctgagcggcgaaatcaaggacaaggag
ctgccgcagtatctggccttgaccccaaggaagaagcggccctatgacaactggctggag
ggcgtgccgcgcttcttggtcggactggtcttccagcctcgcgccggctgcctgggggcc
ctggcagggccggcggcctccacgtcggtggacaggaagcagaaggtgctcacgaggtac
ctgaagcgtctgcagcccgggacgctgcgggcagggcggctgctggagctgctgcactgt
gcccacgaggcactggaccccgggctctggcagcacgtgctgcaggggctcccagcccgc
ctctccttcctgggcacgcggctcacacctcccgacacccacgtgctgggcagcgccctg
gaggcggcaggccaagacttttccctggacctccgcggcactggcatcgacccttccggc
ctggggagcctcgtgggactcagctgtgtcacccgtttcagggctgcgttgagtgacact
gtggagctgtgggagtccctgcagcagcgtggggaggccaagctactccgggcggtggag
gagaagttcaccattgagcctttcaaggccaagtccatgaaagatgtggaagaccttggc
aatctcgtgcagatccagaggacaagaagctcctctgaagcagcagctggggagctccct
gctgtccgagacttaaagaagctggagtttgcgctgggccctgtcttgggcccacaggtt
tttcctaaactggtgaagatcctcgaggcctttacttcccttcagcatctggacctggac
tcgctgagcgagaacaagatcggggacgagggtgttgcccagctctcagccaccttccct
cagctgaaggccctggagacactcaacttgtcccagaacaacatcaccgacgtgggtgcc
tgcaagctggccgaggctctgcccgcgctggccaagtccctcctcaggctgagcttgtac
aataactgtatctgcgatgcgggagctgagagcctggcgcacgtgcttccagacatggtg
tccctccgggtgctggacgtccagtacaacaagttcacagccgctggggcccagcagctt
gccgctggcctgagaaagtgtcctcaggtgaagacactggcgatgtggacgcccaccatc
ccctttggcgtccaggaacatctgcagcagctcgacccacgaatcattctgagatga
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integrated database retrieval system
