KEGG   Capricornis sumatraensis (Sumatran serow): 138075966
Entry
138075966         CDS       T10522                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
csum  Capricornis sumatraensis (Sumatran serow)
Pathway
csum03020  RNA polymerase
csum03420  Nucleotide excision repair
csum05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:csum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    138075966 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    138075966 (POLR2D)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    138075966 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csum03021]
    138075966 (POLR2D)
   03400 DNA repair and recombination proteins [BR:csum03400]
    138075966 (POLR2D)
Transcription machinery [BR:csum03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     138075966 (POLR2D)
DNA repair and recombination proteins [BR:csum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      138075966 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 138075966
NCBI-ProteinID: XP_068824200
LinkDB
Position
3:48963829..48977158
AA seq 142 aa
MAAGGNDPRSGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggcgggcgggaacgatccgcgctctggagatgtagaggaggacgcatcacaactc
atctttcccaaagagtttgaaacagctgagacgcttctgaattcggaagttcatatgctt
cttgagcatcgaaagcagcagaatgagagcgcagaggatgagcaggaactttccgaggtc
ttcatgaaaactttaaattacactgcccgtttcagtcgtttcaaaaacagagagaccatc
gccagtgtccgtagcttgctgctccagaagaagcttcataagtttgagttggcctgttta
gccaacctttgtccagagactgctgaggagtccaaggctctgatcccaagcctggagggg
cggtttgaagatgaggagctacagcagattcttgatgacatccagaccaagcgcagcttt
cagtattaa

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