Capricornis sumatraensis (Sumatran serow): 138076620
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Entry
138076620 CDS
T10522
Symbol
TRIM4
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM4
KO
K11998
tripartite motif-containing protein 4 [EC:
2.3.2.27
]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csum04121
]
138076620 (TRIM4)
Enzymes [BR:
csum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138076620 (TRIM4)
Ubiquitin system [BR:
csum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
138076620 (TRIM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
PRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
EPSP_synthase
DUF7240
Motif
Other DBs
NCBI-GeneID:
138076620
NCBI-ProteinID:
XP_068824971
LinkDB
All DBs
Position
3:complement(5683110..5697643)
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AA seq
475 aa
AA seq
DB search
MEAEDFQEELTCAICLDYFADPVSIECGHNFCRGCLCRTWAPGGSPVRCPECRRPSAPAS
MRPNWALARLTERMRRRRLGPVPAGLCGRHWEPLRLFCEDDQRLVCLVCRESQEHQAHTM
APADEACKSYREKLLKTQSSLTAKMKKVIHFQDMEVKNAAEWKEKMKNQRMRVIAEFAKL
HVLLTEEEQLFLQGLRQEEEETKKRQSENISRLNQMITSLKKLILEVKEKSQSSTLELLQ
NPAEVLTRCENQDVSYSSEDLTVKTVCRLPMMKEMLKRFQVAVTLAEDTAHSKLVFSQEG
RYVKNGASASSWPLFFTAWSYATGWRNPQRTTGFVERFQHLPCVLGKNVFTSGRHYWEVE
NRGSLEVAAGVCREDVMGTPGGSTMCPKAGIWAVCWSSAGCRPLSGTSVSPSKREPALQR
VGVFLDHGAGEVSFYNAVDGEHLHTLPCSSSSRLRPFFWLSPLASVVIPPVTGGK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaggacttccaggaggagctgacctgtgccatctgcctggactatttcgcg
gacccggtgtccatcgagtgcggccacaacttctgccgcggctgcctgtgccgcacttgg
gcgccgggcggcagccccgtccgctgccccgagtgtcggcggccgtcggcgcccgcctcg
atgaggcccaactgggccttggcccggctgaccgagaggatgcggcgccggcgcctgggc
cccgtgcctgcgggcctgtgcggccgccactgggagccgctgcggcttttctgcgaggat
gatcagcggctcgtgtgcttggtgtgcagggagtcgcaggagcaccaggcccacaccatg
gccccagccgacgaggcatgcaagagctaccgggagaaacttctgaagactcagtctagt
ctgacagccaagatgaagaaagtcatacattttcaggacatggaagtgaagaatgctgca
gagtggaaggagaagatgaagaatcagcgaatgagagtcatcgcggagtttgcgaagctg
cacgtcctcctgactgaagaagagcagttgtttcttcagggactgaggcaggaagaagag
gagacaaagaagaggcaaagtgagaacatatctaggctcaaccagatgatcacttctttg
aagaagctcatcctagaggtgaaggagaagagccagagctccaccctggagctgctccag
aatccagcagaggtgttgaccaggtgtgagaatcaggacgtgagctattcctctgaagac
ctcacggtgaagactgtgtgccggcttccgatgatgaaggagatgctgaagcgatttcaa
gtggctgtaactctagctgaggacaccgctcattccaaacttgtcttctcccaggaaggg
agatacgtgaaaaacggggcatcagccagttcttggccactgtttttcacagcatggagc
tacgccaccggatggaggaatccgcagaggaccacaggctttgtggagcgatttcagcac
ttaccctgcgttttggggaaaaatgttttcacttcagggagacattactgggaagttgag
aaccgaggcagcctggaggtggcggcgggggtgtgtcgggaggacgtcatggggacccct
ggtggctccacaatgtgccccaaggcgggaatctgggctgtttgctggagttctgctggc
tgtcggcccctgtcaggcacctccgtgagtcctagcaagcgagagccagctctccagcgg
gtgggagttttcctggatcacggggctggggaggtctctttctacaacgccgtggatggg
gagcacctgcacacgctcccctgctcttccagctcgcgcctccggccgtttttctggttg
agtccattagcatctgtagtcatccccccagtgactggtgggaaatga
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