Capricornis sumatraensis (Sumatran serow): 138077016
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Entry
138077016 CDS
T10522
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03082
ATP-dependent chromatin remodeling
csum04714
Thermogenesis
csum05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138077016 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
138077016 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
138077016 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csum03000
]
138077016 (ARID1A)
03021 Transcription machinery [BR:
csum03021
]
138077016 (ARID1A)
03036 Chromosome and associated proteins [BR:
csum03036
]
138077016 (ARID1A)
Transcription factors [BR:
csum03000
]
Eukaryotic type
Helix-turn-helix
ARID
138077016 (ARID1A)
Transcription machinery [BR:
csum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138077016 (ARID1A)
Chromosome and associated proteins [BR:
csum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138077016 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
138077016
NCBI-ProteinID:
XP_068825488
LinkDB
All DBs
Position
3:complement(170743790..170812294)
Genome browser
AA seq
2284 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEQQQQQQREEAGGEAAAAVAAERGEMKAAAGQES
EGPAVGPPQPLGKELQDGAESNGGGGGGGAGGPGAEPDLKNSNGNAGPRPALNNNLTEPP
GGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGL
AALQSGGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTPG
SGAAAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAAGGTPQPTATPTLNQL
LTSPSSARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAAAAAASGGAQQRS
HHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGY
PGQPYGSQTPQRYPMTMQGRAQSTMGGLSYAQQIPPYGQQGPSGYGQQGQTPYYNQQSPH
PQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQPSPTPYPSQ
QSSTQQHPQSQPPYSQPQAQSPYQQQQPQQPASSTLSQQAAYPQPQSQQSQQTAYSQQRF
PPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGAL
SPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPA
AVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPS
GGQMHTGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGA
GGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQET
AVAMHVAANSIQNRPPGYPNMNQGGIMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANN
SAGMAASPEMMGLGDVKLTPASKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGE
PERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELA
TNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAG
SGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFPDGSDP
TFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGNDPFMSSGQGPNGGMG
DPYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMGTGAPQPNLMPSNPDSG
MYSPSRYPPQQQQQQRHDSYGNQFSAQGTPSGSPFPSQQTTVYQQQQNYKRPMDGTYGPP
AKRHEGEMYSVPYSAGQGQPQQQQLPPAQPPPANQQQSAQPPPQQDVYNQYGNAYPATAA
AATERRPAGGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQASAEVAQQGTMWQG
RNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPSAP
VPPMTRPPPANYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPV
PASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGL
LAESTWALDTINILLYDDNSIMTFSLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPG
QRTLLDPGRFSKASSPAPVEGEEEEDLLGPKLEEEEEEEVIENDEEMAFSGKDKAASENS
EEKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFES
KTELLPSRPHVPCLPVPRKYVTAVEGTPGTTEQEGPPPDGPPEKRITATMDDMLSTRSST
LTEEGAKSVEATKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRC
ICVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGV
SCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQD
PFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNP
VCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNP
PFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFL
IGQS
NT seq
6855 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccc
tcggagctgaagaaagcggagcagcagcagcagcagcagcgggaggaggcggggggcgag
gcggcggcggcggtcgcggcggagcgcggggaaatgaaggcagccgccgggcaggaaagc
gagggccccgccgtggggccgccgcagccactgggaaaggagctgcaggacggggccgag
agcaatgggggtggcggcggcggcggagccggcgggcccggcgcggagccggacctgaag
aactcgaacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccgccc
ggcggcggtggcggcggcagcagcgacggggtgggggcgcctcctcactcagccgcggcc
gccttgccgcccccagcctacggcttcgggcaaccctacggccggagcccgtctgccgtc
gccgccgccgcggccgccgtcttccaccaacaacatggcggacaacaaagccctggcctg
gcagcgctgcagagcggcggcggcggcgggggcctggagccctacgcggggccccagcag
aactcgcacgaccacggcttccccaaccaccagtacaactcctactaccccaaccgcagc
gcctaccccccgcccccccaggcctacgcgctgagctccccgagaggtggcactccgggc
tccggcgcggcggcggcggcggccgccggctccaagccgcctccctcctccagcgcctcc
gcctcctcgtcgtcttcgtccttcgctcagcagcgcttcggggccatggggggaggcggc
ccctcagcggccgcagggggaaccccccagcccaccgccacccccaccctcaaccaactg
ctcacgtcgcccagctcggcccggggctaccagggctaccccgggggcgactacggcggc
gggccccaggacgggggcgccggcaagggcccggcggacatggcctctcagtgctggggg
gctgctgctgcggcggcggcggcggccgcggccgcctcgggaggggcccaacaaaggagc
caccacgcgcccatgagccctgggagcagcggcggcggggggcagccgctcgcccggacc
ccgcagccatccagtccaatggatcagatgggcaagatgagacctcagccatatggcggg
actaacccatactcgcaacaacagggacctccatcaggaccgcagcaaggacatgggtac
ccagggcagccatatgggtcccagaccccacagcggtacccgatgaccatgcagggccga
gcgcagagtaccatgggcggcctctcttatgcacagcagattcctccttatggacagcaa
ggccccagcgggtatggtcagcagggccagactccatattacaaccagcaaagtcctcac
ccccagcaacagcagccaccctactcccagcagccaccatcccagaccccccatgcccaa
ccttcgtatcagcagcagcctcagtctcagccaccgcagctccagtcctctcagcctccg
tactcccagcagccgtcccagcctccccatcagccgtccccgactccatacccctcccag
cagtccagcacccaacagcacccccagagccagcccccctactcacagccgcaggcacag
tctccttaccagcagcagcaacctcagcagccagcatcctcgacgctttcccagcaggct
gcgtatcctcagccccagtctcagcagtcacagcaaactgcctactcccagcagcgcttc
cctccaccgcaggagttatctcaagattcatttgggtctcaggcatcctcagccccctca
atgacctccagtaagggagggcaagaagatatgaacctgagtcttcagtcaagaccttcc
agcttgcctgatctgtctggttcaatagatgatctccccatggggacagaaggagctctg
agccctggagtgagcacatcagggatttccagcagccaaggggagcagagtaacccagct
cagtctcctttctctccccacacctcccctcacctgcctggcatccgaggcccctccccg
tccccagttggctctcctgccagtgttgcccagtctcgctcaggaccactctcgcctgct
gcagtgccaggcaaccagatgccacctcggccacccagtggccagtcggacagcatcatg
catccttctatgaaccaatcaagcattgcccaagatcgaggttacatgcagaggaacccc
cagatgccccagtacagctccccccagcccgggtcagccttatctccacgtcagccttcc
ggaggacagatgcacacaggcatgggctcctaccagcagaactccatggggagctacggt
ccccaggggagtcagtacggcccacagggaggctaccccaggcagccaaactataatgcc
ttgcccaatgctaactaccccagtgcaggcatggctggaagcatgaaccctatgggtgct
ggaggtcagatgcatgggcagcctggcatcccaccttatggcacactccctcccgggagg
atgagtcacgcctccatgggcaaccggccttatggccctaacatggccaatatgccacct
caggttgggtcagggatgtgtccccctcccgggggcatgaaccggaaaactcaagaaact
gctgtcgccatgcatgttgctgccaactctatccaaaacaggccacccggctaccccaat
atgaatcaagggggcataatgggaactggacctccctatggacaggggattaatagtatg
gctggcatgatcaaccctcagggacccccatatcccatgggtggaaccatggccaacaat
tcagcaggaatggcagccagtccagagatgatgggtcttggggatgtcaagttaactcca
gcctccaaaatgaacaacaaggcagatgggacacccaagacggaatctaaatccaagaaa
tccagttcttctactacaaccaatgagaagatcaccaagttgtatgagctgggtggtgag
cctgagaggaagatgtgggtggaccgttatctggccttcacggaggagaaggccatgggc
atgacaaatctgcctgctgtgggtaggaaacctctggacctgtaccgcctctatgtgtct
gtgaaggaaattggtggattgactcaggtcaacaagaacaagaagtggcgggaacttgcg
accaacctcaatgtcggcacctcaagcagtgctgccagctccttgaaaaaacagtacatc
cagtgtctctatgcctttgagtgcaagatcgaacggggagaagaccctcccccagacatc
tttgcagctgctgattccaagaagtcccagcccaagatccagcctccctcgcctgcggga
tcagggtcgatgcaggggccacagacacctcagtcaaccagcagctccatggcagaagga
ggagacctgaagccaccaactccagcatccacaccgcacagccagatcccccccttacca
ggcatgagtaggagcaattcggtcgggatccaggatgcctttcctgatggaagtgacccc
acattccagaagcggaattccatgactccaaaccctgggtaccaacccagtatgaatacc
tccgacatgatggggcgcatgtcctatgagccaaataaggatccttacggcagcatgagg
aaagctccggggaacgatcccttcatgtcctcaggtcagggccccaatggcgggatgggg
gacccctacagtcgagctgccggccctgggctgggaaatgtggcaatgggaccgcgacag
cactatccctatggaggtccttatgacagagtgaggacggagcctggcataggacccgag
ggaaacatgggcactggggccccgcagccgaatctcatgccttccaacccagactcgggg
atgtattctcccagccgttacccgccgcagcagcagcagcagcagcgacatgattcctat
ggcaatcagttctccgctcaaggcaccccttccggcagccccttccccagccagcagacc
acagtgtatcagcagcagcagaattacaagcggccgatggatggcacctacggccctcct
gccaagcggcacgaaggggagatgtacagcgtgccgtacagcgcggggcaggggcagccc
cagcagcagcagctgccccccgcccagcccccacctgccaaccagcagcaatctgctcag
cctccccctcagcaggatgtgtacaaccagtacggaaacgcctatcctgccactgccgcc
gctgctactgagcgccgaccagcaggcggcccccagaaccagtttccattccagtttggc
cgggaccgtgtctcagcaccccctggctccaatgcccagcagaacatgccaccacagatg
atgggcggccccatacaggcatcggctgaggttgcccagcaaggcaccatgtggcagggg
cgcaatgacatgacctacaactacgccaacaggcagagcacgggctcggccccgcaaggc
cccgcctatcatggcgtgaaccgaacagatgaaatgctgcacacggatcagagggccaac
catgaaggcccgtggccttcccatggcacacgccagcccccctatggtccttctgccccc
gtgccccccatgacaaggccccctccagccaactaccagcccccaccaagcatgcagaat
cacattcctcaggtatccagccccgctcccctgccccggccaatggagaaccgcacctct
ccaagcaagtctccattcctgcactctgggatgaagatgcagaaggcagggcccccagta
cccgcctcgcacatagcacctgctcctgtgcagccccctatgattcggcgggacatcacc
ttcccacctggctctgttgaagccacacagcctgtgttgaagcagaggaggcggctcaca
atgaaagacattggaaccccggaggcatggcgggtaatgatgtccctcaagtctgggctg
ctggcagagagcacgtgggcattagacaccattaacatcctgctgtacgatgacaacagc
atcatgactttcagcctcagtcagctcccagggttgctcgaactccttgtggaatatttc
cgacgttgcctgattgagatctttggcattttaaaggagtacgaggtgggtgacccagga
cagagaacactattggaccctgggagattcagcaaagcgtctagtccagcccctgtggag
ggggaggaggaggaagacctgctaggtcccaaactagaggaggaggaagaggaggaagta
attgaaaatgatgaggagatggccttttcgggcaaggacaaagcagcctcagagaatagt
gaggagaaactgattagtaagtttgacaagcttccagtaaagatcgtgcagaagaatgac
ccgtttgtggtggactgctcagataagcttgggcgcgtgcaggagtttgacagcggcctg
ctgcactggcggattggtgggggcgacaccactgagcatatccagacccactttgagagc
aagacagagctgctgccttcccggcctcacgtgccctgcctaccagtccctcggaagtat
gtcacagcagtagagggcacaccagggacaacagagcaggagggccccccgcctgatggc
cctccagaaaaacggatcacggccactatggatgacatgttgtccacgaggtctagcaca
ctgaccgaggagggagctaaaagtgtagaggccacgaaggaaagcagtaagtttccattc
ggcatcagcccagcgcagagccatcggaacatcaagatcctagaggatgaaccccacagt
aaagatgagaccccactgtgtacccttctggactggcaggattcccttgccaaacgctgc
atctgtgtctccaacaccatccgaagcctgtcatttgtgccaggcaacgactttgagatg
tccaaacacccggggctgctgctgatcctgggcaagctgatccttctgcaccacaagcac
ccagaacggaagcaggcaccactaacttatgagaaggaggaggagcaggaccaaggggtg
agctgcaacaaagtggagtggtggtgggactgcttggagatgcttcgggaaaacaccttg
gtcacgctcgccaacatctcggggcagttggacctctccccataccccgagagcatttgc
ctgcctgtcctggacggactcctacactgggcagtctgcccttcagctgaagcccaggac
cccttctccaccctgggccccaacgccgtcctttccccccagagactggtcttggaaacc
ctcagcaaactcagcatccaggacaacaatgtggacctgatcctggccacgccccctttc
agccgcctggagaagttgtatagcaccatggtgcgcttcctcagtgaccgaaagaaccca
gtgtgccgggagatggctgtagtcctgctggccaacctggcacagggcgacagcctggca
gcccgtgccatcgcagtgcagaagggcagcatcggcaacctcctgggcttcctggaggac
agccttgcggccacacagttccagcagagccaggctagcctgctccacatgcagaacccg
ccctttgagccaactagtgtggacatgatgcgacgggctgcccgtgcgctgctggccctg
gccaaggtggacgagaaccactcggagttcacgctgtatgagtcacggctgttggacatc
tcggtgtcaccgttgatgaactcattggtttcacaagtcatttgtgatgtactgtttttg
attggccagtcatga
DBGET
integrated database retrieval system
