Capricornis sumatraensis (Sumatran serow): 138078290
Help
Entry
138078290 CDS
T10522
Symbol
SHANK3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
138078290 (SHANK3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
SH3_2
Ank_3
PDZ_6
SH3_9
Ank_5
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
138078290
NCBI-ProteinID:
XP_068827062
LinkDB
All DBs
Position
4:164056756..164104189
Genome browser
AA seq
1807 aa
AA seq
DB search
MQLSRAAAAAAAAAPAEPSEPLSPAPAPAPAPPGPLPRSAADGAPVGGRGGPGRGEEPRG
AQLPAASGPGPGAGMDGPGASAVIVRVGIPDLQQTKCLRLDPAAPVWAAKQRVLCALNHS
LQDALNYGLFQPPSRGRAGKFLDEERLLQEYPPNLDTPLPYLEFRYKRRVYAQNLIDDKQ
FAKLHTKANLKKFMEYVQLHSTDKVARLLDKGLDPNFHDPDSGECPLSLAAQLDDATDLL
KVLKNGGAHLDFRTRDGLTAVHCATRQRNAAALTTLLDLGASPDYKDSRGLTPLYHSALG
GGDALCCELLLHDHAQLGTTDENGWQEVHQACRFGHVQHLEHLLFYGADMGAQNASGNTA
LHICALYNQESCARVLLFRGANKDIRNYNSQTAFQVAIIAGNFELAEVIKTHKDSDVVPF
RETPSYAKRRRLAGPSALASPRPLQRSASDINLKGEVQPAASPGPSLRSLPHQLLLQRLQ
ERDRDRDGDQQDGGGPATGRGSQSKISPSGPGGPGGPGGPGPGPAPPAPPAPPPRGPKRK
LYSAVPGRKFIAVKAHSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVKGRTGWFPADCVE
EVQMRQYDARHETREDRTKRLFRHYTVGSYDSLSAHSDYVIDDKVAVLQKRDHEGFGFVL
RGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQV
VALIRQGGNRLVMKVVSVTRKPEEDGARRRAPPPPKRAPSTTLTLRSKSMTAELEELASI
RRRKGERPDEILAAAAEPALRPDIADADSRAATVKQRPTSRRITPAEISSLFERQGLPGP
EKLPGSLRKGIPRTKSVGEDEKLASLLEGRFPRSTSMQDTVREGRGIPPPPQTAPPPPPA
PYYFDSGPPPTFSPPPPPPGRAYDTVRSSFKPGLEARLGAGAPGLYDSGAGLGPLPYPER
QKRARSMIILQDSAPEAADAARPPPAATPPERPKRRPRPPGPDSPYANLGAFSASLFAPS
KPQRRKSPLVKQLQVEDAQERAALAVGSPGPVVGSFAREPSPTHRGPRPSGLDYGPGDGP
GLPFGGPAPSKDRRLEERRRSSVFLSVGAIEGSPPSADMPSLQPSRSIDERLLGTGATTT
GRDLLLPSPVSALKPLVSGPSLGPSGSTFIHPLTGKPLDPSSPLALALAARERALASQVP
SRSPTPVHSPDTDRPGPLFVDVQARDSERGPLASPAFSPRSPAWVPVPARREPEKALREE
RKSPEDKKSMILSVLDTSLQRPAGLIVVHATSNGHEPSGLGAEEQRPGTPELAPAPTQSA
VVAEPLPSPRAQTPGSAPADPGPGQGSSEEEPELVFAVNLPPAQLSSSDEETREELARIG
LVPPPEEFANGVLLATPLAGPGPSPTTVPGPASGKPSSEPPPAPESAADSGVEEADTRSS
SDPHLETTSTISTVSSMSTLSSESGELTDTHTSFADGHTFLLEKPPVPPKPKLKSPLGKG
PVTFRDPLLKQSSDSELMAQQHHAATAGLASVAGPARPRYLFQRRSKLWGDPVESRGLPG
PEDDKPTVITELSSRLQQLNKDTRSLGEEPAGGLGGLLDPAKKSPIAAARLFSSLGELST
ISAQQRSPGGPGGGASYPVRPGGRYPVARRAPSPVKPASLERVEGLGAGAGGAGRPFGLA
PPTILKSSSLSIPHEPKEVRFVVRSVSARSRSPSPSPLPSPAPGPGSGAPSPRRPFQQKP
LQLWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALTKDDFVELGVTRVGHRMNIERA
LRQLDGS
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgagccgcgccgccgccgccgccgccgctgccgcccctgcggagccctcggag
ccgctgtccccggcgccggccccggccccggctccccccggccccctcccgcgcagcgcg
gccgacggggctccggtggggggccggggggggccggggcgcggcgaggagccccggggc
gcccagctcccggccgctagcggccccggcccgggcgcggggatggacggccccggggcc
agcgccgtgatcgtgcgcgtcggcatcccagacctgcagcaaacgaagtgcctgcgcctg
gacccggccgcgcccgtttgggccgccaagcagcgcgtgctctgcgccctcaaccacagc
ctccaggacgcgctcaactacgggctcttccagccgccctcccggggccgcgccggcaag
ttcctggacgaggagcggcttctgcaggaatacccgcccaacctggacacgcccctgccc
tacctggagtttcgatacaagaggcgagtttatgcccagaacctcattgatgataagcag
tttgcaaagcttcacacaaaggcgaacctgaagaagtttatggaatacgtccagctgcac
agcacggacaaggtggcccgcctgctggacaaggggctggaccccaatttccacgatcct
gactcaggagagtgtccgctgagcctggccgcccagctggacgatgccaccgacctgctg
aaggtgctgaagaacggcggcgctcacctggacttccgcacgcgagacgggctcacggct
gtgcactgcgccacgcgccagcggaacgcggccgccttgacgaccctgctggacctgggt
gcctcaccggactacaaggatagccgtggtctgacgcccttgtaccacagcgccctgggt
gggggggacgccctctgctgcgagctgctcctgcatgaccatgctcagctggggaccacc
gacgagaacggctggcaggaagtccaccaggcctgccgcttcgggcacgtgcagcacctg
gagcacctcctgttctacggagctgacatgggggctcagaatgcctctgggaacacggcc
ttgcacatctgtgctctctacaaccaggagagctgtgcccgtgtcctgcttttccgtgga
gccaacaaggatatccgcaattacaacagccagacggccttccaggtggccatcatagcc
gggaactttgagctcgcggaggtcatcaagacccacaaagattcggacgttgtgccattc
agggaaacccccagctacgcgaagcggcggcggctggctggccccagcgccctggcctcg
cctcggcccctgcagcgctcagccagtgacatcaacctgaagggcgaggtgcagccggca
gcgtctcctgggccttcgctgcgaagcctcccccaccagctgctgctccagcgactgcag
gagagagaccgggaccgggatggggaccagcaggacggcggcggccctgccacaggcagg
ggcagccagagcaagatcagcccgagcgggcccggcggccccggcggccccggcggcccc
ggccccggcccggcgccccccgcgccccccgcgccgccgccccggggcccgaagcggaaa
ctttacagcgcagtccccggccgcaagttcatcgccgtgaaggcgcacagcccgcagggc
gagggcgagatcccgctgcaccgcggcgaggccgtgaaggtgctcagcattggggagggc
ggtttttgggaggggaccgtgaaaggccgcacgggctggttcccggctgactgcgtggag
gaggtgcagatgaggcagtatgacgcccggcacgaaacccgggaggaccggaccaagcgg
cttttccgccactacacagtgggctcttacgacagcctctctgcacacagtgactatgtc
attgacgacaaggtggctgtcctgcagaaacgggaccacgaaggctttggttttgtgctc
cggggggccaaagcagagactcccatcgaggagttcacgcccacgccggccttccctgcg
ctccaatacctcgagtcggtggatgtggagggcgtggcctggagggcagggctgcgcacg
ggagacttcctcatcgaggtgaacggcgtgaacgtggtgaaagtcggacacaagcaggtc
gtggctctgatccgccagggcgggaaccgcctcgtcatgaaggtggtgtcagtgaccagg
aagccggaggaggatggggctcgacgcagagccccgccgccccctaagagagcccccagc
acgacgctgaccctgcgctccaagtccatgacagcagagcttgaggagcttgcctccatt
cggagaagaaaaggggagaggccggacgagatcctggcggccgccgcggagccggcactg
aggcccgacatcgcggacgcggactcaagggcggccaccgtcaagcagcggcccaccagc
cggaggatcacccccgctgagatcagctcactgtttgagcgccagggcctcccaggcccg
gagaagctgccaggctccctgcggaaggggattccacggaccaagtctgtaggggaggac
gagaagctggcgtccctgctggaggggcgcttcccgaggagcacgtcgatgcaggacacg
gtgcgcgagggccgtggcatcccgccccctccgcagaccgcgccgccgccccctcccgcc
ccctactacttcgactctgggccgccccccaccttctctccaccgccgccgcctccgggc
cgcgcctacgacaccgtgcgctccagcttcaaacccggcctggaggcgcgcctgggcgcg
ggcgccccgggcctgtatgactccggcgcgggcctgggcccgctgccttacccggagcgg
cagaagcgcgcgcgctccatgatcattctccaggactcggcgcccgaggcggccgacgcc
gctcggcccccgccagcggccaccccaccggagcgacccaagcggcggccgcggccgccg
ggccccgacagcccctacgccaacctgggcgccttcagcgccagcctcttcgcgccgtcc
aaacctcagcgccgcaagagcccgctggtgaagcagctgcaggtagaggatgcgcaggag
cgcgcggccttggccgtgggcagccccggcccggtcgtcggcagcttcgccagggagccc
tccccgacgcaccgcgggcctcggcccagcggcctcgactacggccccggagacggcccc
gggctgccgtttgggggcccggccccgagcaaggaccggcggctggaggagcggcggcgc
tccagcgttttcctgtccgtgggcgccatcgagggcagccctccgagcgcggacatgccg
tccctgcagccctcgcgctccatcgacgagcgccttctgggaactggcgccaccaccacc
ggccgcgacctgctgctgccctccccagtctctgctctgaagccattggtcagcggcccg
agccttgggccttccggctccactttcatccacccgctcaccgggaaacccctggacccc
agctcgcccttggccctggccctggcggctcgcgagcgggctctggcttcccaggtgccc
tcccggtcccctacacctgtgcacagtcccgacaccgaccggcccgggcccttgtttgtg
gatgtgcaggccagggactcggagcgagggcctctggcctcgccagccttctcccccagg
agcccagcctgggttcccgtgcctgcgcggagggagcccgagaaggcgctccgggaggag
cgcaagtctccggaggacaagaagtccatgatcctcagcgtcctggacacgtccctgcag
cggcccgccggcctcatcgtcgtgcacgccaccagcaatgggcacgagcccagtgggctg
ggggccgaagagcagcgccctggcaccccggagctggccccggcccccactcagtcagct
gtggtcgcagagcccctgccgagcccccgggcccagacccccggcagtgcccccgctgac
cccgggcccggccagggcagctccgaggaggagccggagctggtatttgctgtgaacctg
ccgccagcccagctgtcctccagcgatgaggagaccagagaggagctggcgcgcatcggg
cttgtgccgcctcccgaagagtttgccaacggggtcctgctggccacgccactcgccggc
cccggcccctcacccaccacggtgccaggcccggcctcagggaagccgagcagcgagccg
ccgcccgcgccggagtccgcagcagattcgggggtggaggaggccgacacgcgcagctcc
agcgacccccacctggagaccacaagcaccatttccaccgtgtccagcatgtccaccctg
agctcggagagcggggaactcacggacacccacacctccttcgctgacggacatactttt
ctactcgagaagccaccagtgcctcccaagcccaagctcaagtccccgctggggaagggg
ccggtgaccttcagggacccgctgctgaagcagtcctccgacagtgagctcatggcccag
cagcaccacgccgccaccgccgggctggcctctgttgccgggcctgctcgccctcgctac
ctcttccagagaaggtccaagctgtggggggaccccgtcgagagccgggggctccctggg
cctgaagacgacaagccgactgtgatcaccgagctcagctcccgcctgcagcagctgaac
aaagacacccgctccctgggggaggagccggccggcggcctgggcggcctgctggaccct
gccaagaagtctcccatcgcggcagctcggctcttcagcagcctcggtgagctgagcacc
atctcagcgcagcagcgcagccctgggggcccgggcggcggggcctcctacccggtgcgg
cccggcggccgctaccctgtggcgcggcgcgccccgagcccggtgaagcccgcgtcgctg
gagcgggtggaggggctgggggcgggggcgggcggcgcggggcggcccttcggcctcgcg
ccccccaccatcctcaagtcgtccagcctctccatcccgcatgagccgaaggaggtgcgg
tttgtggtgcgcagcgtgagcgcgcgcagccgctcgccctcgccttcgccgctgccctcg
cctgcgcccggcccgggctccggggcccccagcccccgccggcccttccagcaaaagccc
ctgcaactctggagcaagttcgacgtgggcgactggctggagagcatccacttgggtgag
caccgcgaccgcttcgaggaccacgagatcgagggcgcgcacctgccggcgctcaccaag
gacgacttcgtggagctgggcgtcacgcgcgtgggccaccgcatgaacatcgagcgcgcg
ctcaggcagctggacggcagctga
DBGET
integrated database retrieval system
