Capricornis sumatraensis (Sumatran serow): 138078318
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Entry
138078318 CDS
T10522
Symbol
USP39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138078318 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csum03041
]
138078318 (USP39)
Spliceosome [BR:
csum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
138078318 (USP39)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
138078318
NCBI-ProteinID:
XP_068827112
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Position
1:57317889..57354761
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AA seq
565 aa
AA seq
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MSSRSKRESRGSTRGKRESESRSSSARVKRERDREREPEAPSSRGSPVRVKREVEPASAR
EAPTPVVPAVRVKREREADEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDF
EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE
IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL
QALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML
QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL
PHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILA
KFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDL
REYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQ
MITLSEAYIQIWKRRDNDETNQQGA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccggtccaagcgggagtctcgcggttcgacccgcgggaagcgcgagtccgag
tcgcggagcagctcggctcgcgtcaaacgggaacgagatcgggagcgggagcccgaggcg
ccgagctcccgaggcagcccggtgcgcgtgaagcgggaggtcgagccggcgagcgcgcgc
gaggccccgacgccggtagtcccggcggtgagggtgaagcgggagcgcgaggccgacgag
gactcggaacctgagcgggaggtgcgagcaaagaatggccgcgtggattctgaggaccgg
aggagccgccactgcccatacctggataccattaacaggagtgtgctggactttgacttt
gagaaattgtgttccatctccctctcgcacatcaatgcgtatgcttgtctggtgtgtggc
aagtactttcaaggccggggtttgaagtctcacgcttacattcacagtgtgcagtttagt
caccatgtcttcctcaacctccacaccctcaagttttactgcctccctgacaactatgag
atcatcgattcctcactagaggatatcacgtatgtgttgaagcccactttcacaaagcag
cagatcgctaacctggacaagcaagccaagttgtcccgggcatatgacggcaccacttac
ctgccaggtattgtgggcctgaataacataaaggccaatgactacgccaacgccgtcctt
caggctctgtctaatgttcctcctctccggaactacttcctggaagaagacaattataag
aacatcaaacgtcctcctggggatatcatgttcttgttggtccagcgtttcggagagctg
atgagaaaactctggaaccctcgcaatttcaaagcacatgtctctccccatgagatgctg
caggctgttgtcctctgcagcaagaagacttttcagatcacgaaacagggggatggagtt
gattttctgtcctggtttttgaatgctctacactcagctctggggggcacaaagaagaaa
aaaaagacaattgtaactgacgttttccagggatccatgaggatcttcactaaaaaactg
cctcatcctgatctgccagcggaagagaaagagcagctgctgcataatgacgagtaccag
gagacgatggtggagtccacgtttatgtacctgaccctggacctgcctaccgcccccctg
tacaaggacgagaaggagcagctcattatcccccaggtgcctctcttcaacatcctggcc
aagttcaacggcatcactgagaaggaatataagacctacaaggagaactttctgaagcgc
ttccagctcaccaagctgcctccatatctaatcttttgtattaagagattcactaagaac
aatttctttgtggagaagaatccgactattgtcaacttcccgattacaaatgtggacctg
agagagtatttgtctgaagaagtgcaggcagtgcacaagaataccacctatgacctcatc
gccaacattgtacacgacggcaaaccctccgagggctcctaccggatccacgtgctccat
catgggacaggcaaatggtatgaattacaggacctccaggtgaccgacatccttccccag
atgatcacactgtcggaggcttacattcagatttggaagaggcgagataatgatgaaacc
aaccagcagggggcatga
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