Capricornis sumatraensis (Sumatran serow): 138079233
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Entry
138079233 CDS
T10522
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
csum Capricornis sumatraensis (Sumatran serow)
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csum03000
]
138079233 (RC3H2)
04121 Ubiquitin system [BR:
csum04121
]
138079233 (RC3H2)
Transcription factors [BR:
csum03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
138079233 (RC3H2)
Ubiquitin system [BR:
csum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138079233 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
Xin
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
138079233
NCBI-ProteinID:
XP_068828205
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All DBs
Position
1:12834541..12875595
Genome browser
AA seq
1189 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSVKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAIRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETTGKIVPSTNGISNAENSVSQLIPRSTDSTLRALETVKKVGKVGANGQSAAGPSVE
SVTENKIGSPPKTPVSNVAATSAGPTNAGTELNSVPPKSSPFITRVPVYPQHSENIQYFQ
DPRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSSNVPESSLPPASMPYADHYST
FSPRDRMNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM
DVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTTVPLPREPCGHLKTSCEEQIRRKPE
QWAQYHTQKAPLVSSTLPVATQSPTPPSPLFSVDFRTDFSENVSGTKFEEDHLSHYSPWS
CGTIGSCINAIDSEPRDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGP
IISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGNEATS
SAHYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDE
GRHLTLNLLSKEIELRNGESDYTEDAADTKPDRDIELELSALDTDEPDGQGEQIEEILDI
QLGISSQNDQLLNGTAVENGHPVQQHQEEPLEQKRQSLGEDRVILEEQKTILPVTSCFSQ
PLPVSISNASGLPITTSVSVGNLILKTHVMSEDKNDFLKSVANGKMVNS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaacgtgcacaaacccatcagtttaggttgttcacacactgtttgcaagacc
tgcttgaataaacttcaccgaaaagcttgtccttttgaccagactgccatcaacacagac
attgatgtgcttcctgtcaacttcgcacttctccagttagttggagcccaggtaccagat
catcagtcagtaaagttaagtaatttaggtgagaacaaacactatgaggttgcaaagaaa
tgtgttgaagatttggcgctctacttaaaaccactaagtggaggtaaaggtgtagctagt
ttgaaccagagtgcactgagccgtccaatgcaaaggaaactagtgacacttgtaaactgt
caactggtggaggaagaaggtcgtgtaagagccatacgagcagcccgttcacttggagaa
aggactgtaacggaactaatattacagcaccagaaccctcagcagttgtctgccaaccta
tgggctgctgtcagggctcgaggatgccagtttctagggccagctatgcaagaagaggct
ttgaagttggtgttactggcattagaagatggttctgctctctcaaggaaagttctggta
ctttttgttgtgcaaagactagaaccaagatttcctcaggcatcgaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcttgttttaaggttactaaacgggatgaagac
tcttccctgatgcagctaaaggaggaattccgcagttatgaggctttacgcagagaacat
gatgcccaaattgttcatattgctatggaagcaggactccgtatttcacctgagcaatgg
tcctcacttctgtatggtgacttggcgcataaatcacacatgcagtcgatcattgataag
ctgcagtctccagaatcctttgcaaagagtgttcaggaattgacaattgttttgcaacga
acaggtgacccagctaacttaaatagattgaggcctcacttagagcttcttgcaaacata
gaccctaatccagatgctgtttcaccaacttgggagcagctagaaaatgcaatggtagct
gttaaaacagtggttcatggcctagtagacttcatacaaaattatagtagaaaaggccat
gagacacctcagcctcagccaaatagcaaatacaagaccagcatgtgtcgagatttgcga
caacaaggagggtgtccacgaggaacaaattgtacttttgcccattctcaggaagagctt
gaaaagtatcgattaaggaacaaaaagatcaatgcaactgtaagaacgtttcctcttcta
aataaagttggtgtaaacaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaacaacggggaaaattgttccaagtacaaatggaatttcaaatgcagaa
aacagtgtttcccagctaattccacgtagtactgacagtaccttaagagctctggagact
gtgaagaaagtggggaaggttggcgccaatggccagagtgctgctgggccttcagtagag
tctgtaactgaaaataaaattggctctccacctaagactcctgtaagtaatgtagcggct
acctcagctgggcccactaatgctggaacagagctgaattctgtgcctccaaaatccagc
ccatttatcactagagtaccagtatatcctcagcattctgagaacattcagtattttcaa
gatccaaggactcagataccgtttgaagtcccacagtacccacaaactggatactaccca
ccacctccaacggtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccagt
aatgttccagagtcctccctcccacctgcttccatgccatatgccgatcattacagtaca
ttttcccctcgagatcgaatgaattcttctccttaccaacctcctcctccgcagccgtat
ggaccagttcccccagtaccttctggaatgtatgctcctgtgtacgacagcaggcgcatc
tggcgcccacctatgtaccaacgagatgatattattagaagcaattctttacctccaatg
gatgtgatgcactcgtctgtgtatcagacgtctttgagggaaagatataactcattagat
gggtattattcagtggcttgtcagccaccaagtgagccaaggacaactgtgcctttacca
agggaaccttgtggtcatttgaagaccagttgcgaggagcagataagaagaaagccagag
cagtgggcacagtaccacactcagaaagcacctcttgtctcttcaactcttcctgtggca
acacagtcaccaacaccaccttctcctctattcagtgtagactttcgcactgatttctct
gaaaatgtgagtggcacaaaatttgaagaagatcatctttcccattattctccctggtct
tgtggcaccatcggttcttgtataaatgccattgattcagagcccagagatgtgattgct
aattcaaatgcggtattaatggacctggacagtggggatgttaagagaagagtgcattta
tttgaaactcagagaaggacaaaagaagaagatccaataattccttttagtgatggaccc
atcatctcaaaatggggtgcgatttctagatcttcccgtactggttaccataccacggac
cctgtccaggccactgcttcccaaggaagtgcaaccaagcccatcagtgtatcagattat
gtaccttacgtcaatgctgttgattcaaggtggagttcatatggtaatgaggctacatca
tcagcacattatattgaacgggacagattcattgttaccgatttatctggtcatagaaag
cattccagtactggagaccttttgagcattgaacttcagcaggccaagagtaactcattg
cttcttcagagggaggccaatgctctggctatgcaacagaagtggaattccctggatgaa
ggccgtcacctcacattaaatcttctaagcaaggaaattgaactgagaaatggagagagt
gattatacggaagatgcagctgatactaagcctgatagggatattgagttagagctgtca
gcacttgatactgatgaacctgatggacaaggtgaacagattgaagagatcctggacata
cagcttggtatcagttctcagaatgatcagttgctgaatggaacagcagtagagaatggg
catccagtccagcagcaccaagaggagcctctcgagcagaagagacagagtttaggtgaa
gaccgtgtgattctggaagagcaaaaaacaattctgccggtaacttcttgctttagccag
ccactcccagtgtccatcagcaatgcgagtggcctacccatcaccacatctgtcagtgtt
ggcaacctcattctgaaaactcatgttatgtctgaagataaaaatgactttttaaaatct
gttgcaaatgggaagatggttaatagctga
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