Capricornis sumatraensis (Sumatran serow): 138079699
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Entry
138079699 CDS
T10522
Symbol
CFTR
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum02010
ABC transporters
csum04024
cAMP signaling pathway
csum04152
AMPK signaling pathway
csum04530
Tight junction
csum04971
Gastric acid secretion
csum04972
Pancreatic secretion
csum04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138079699 (CFTR)
09132 Signal transduction
04024 cAMP signaling pathway
138079699 (CFTR)
04152 AMPK signaling pathway
138079699 (CFTR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
138079699 (CFTR)
09150 Organismal Systems
09154 Digestive system
04971 Gastric acid secretion
138079699 (CFTR)
04972 Pancreatic secretion
138079699 (CFTR)
04976 Bile secretion
138079699 (CFTR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csum02000
]
138079699 (CFTR)
Enzymes [BR:
csum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
138079699 (CFTR)
Transporters [BR:
csum02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
138079699 (CFTR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
CFTR_R
ABC_tran
SMC_N
AAA_21
AAA_29
T2SSE
DO-GTPase2
AAA_16
RsgA_GTPase
DUF87
Zeta_toxin
MeaB
NTPase_1
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
138079699
NCBI-ProteinID:
XP_068828502
LinkDB
All DBs
Position
5:complement(55637410..55818432)
Genome browser
AA seq
1541 aa
AA seq
DB search
MQRSPLEKASVVSKLFFRKFVNYKLVSNKYLSLALIFPLFMLGNLEILVHLQMPCLHEIV
YIGDQVNSYICFSSLYFSWTRPILKKGYRQRLELSDIYHISSSDSADNLSEKLEREWDRE
LASKKNPKLINALRRCFFWRFMFYGIILYLGEVTKAVQPLLLGRIIASYDPDNKVERSIA
IYLGIGLCLLFIVRTLLLHPAIFGLHHIGMQMRIAMFSLIYKKTLKLSSRVLDKISIGQL
VSLLSNNLNKFDEGLALAHFVWIAPLQVTLLMGLLWDLLQAFTFCGLAFLVVLALLQAGL
GKMMMKYRDQRAGKINERLVITSEMIENIQSVKAYCWEEAMEKIIENLRQTELKLTRKAA
YVRYLNSSAFFFSGFFVVFLSVLPYALLKGIILRKIFTTISFCIVLRMAVTRQFPWAVQT
WYDSLGAINKIQDFLQKQEYKTLEYNLTTTDVVMENVTAFWEEGFSKLFEKAKENNNDRK
ISNGDTSLFFSNLLLGTPVLKDISFKIERGQLLAVAGSTGAGKTSLLMMIMGELEPSEGK
IKHSGRISFCSQYSWIMPGTIKDNIIFGVSYDEYRYRSVIKACQLEEDISKFSEKDNIVL
GEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVLTEKEIFESCVCKLMANKTRI
LVTSKMEHLKKADKILILHEGSIYFYGTFSELQNQRPDFSSKLMGCDTFDQFTAERRNSI
ITETLRRFSLEGDTSVSWNETKKPSFKQTGEFGEKRKNSILNSINSIRKFSVVQKTSLQM
NGIDGASDEPLERRLSLVPHSEPGEGILPQSNAVNSGPTFLGGRRQSVLNLMTCSSVNQG
QSIHRKTATSTRKMSLAPQASLAEIDIYSRRLSQDTGLEISEEINEEDLRDCFFDDVENI
PAVTTWNTYLRYITVHKSLMFVLIWCLVVFLVEVAASLVVLCLFPKILFQDKGNGTKSGN
NSYAVIITSTSSYYIFYIYVGVADTLLALGLFRGLPLVHTLITVSKTLHHKMLQSVLQAP
MSTLNTLKTGGILNRFSKDIAVLDDLLPLTIFDFIQLLLIVIGAVVVVSVLQPYIFLATV
PVIAAFILLRAYFLHTSQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFGRQPYFETLFHK
ALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILTTGEGEGRVGIILTLAMNIM
GTLQWAVNSSIDVDSLMRSVSRVFKFIDMPTEDGKPNNSFRPSKDSQPSKVMIIENQHVK
KDDIWPSGGQMTVKDLTAKYIDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLLAFLR
LLNTKGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVA
DEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPI
TYQIIRRTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQRMLSEKSLFRQ
AISPADRLKLLPHRNSSRQRSRANIAALKEETEEEVQETKL
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggtcgcctctggaaaaggccagcgtcgtctccaaactttttttcaggaaattt
gtgaattataaacttgttagtaacaaatacttaagtttggcccttattttccccctcttc
atgcttggaaacttagaaatcttggttcacctacagatgccatgcttgcatgagatagtc
tacattggagatcaagttaacagttatatctgtttctcctctctttatttcagctggacc
agaccaattttgaagaaaggatacagacagcgcttggaattgtcagacatataccatatc
tcttcttctgattctgctgacaatctatctgaaaaattggaaagagaatgggacagagaa
ctggcttcaaagaaaaatcccaaactcattaatgcccttcgacgatgctttttctggaga
tttatgttctatggaatcatattatatttaggggaagtcaccaaagcagtccagcctctc
ttactgggaagaatcatagcttcctatgacccagataacaaggtggaacgctccattgcc
atttacttaggcataggcctatgccttctctttatcgtgaggacgctgctcctgcaccca
gccatttttggtctccatcacattggaatgcagatgagaatagctatgtttagtttgatt
tataagaagactttgaagctatcaagccgtgttctggataaaataagtattggacaactt
gttagtctcctttcgaacaacctgaacaaatttgatgaaggacttgcactggcacatttt
gtgtggattgctcctctgcaagtgacactgctgatggggctgctctgggacttgttgcag
gccttcaccttctgtgggcttgctttcctcgtagtccttgcccttcttcaagccgggtta
gggaaaatgatgatgaagtacagagatcagagagctggaaagatcaatgaaagactggtg
ataacgtcagaaatgattgaaaatatccaatcggttaaggcatactgctgggaagaagca
atggaaaaaataattgaaaacctaagacaaacagaactgaaacttacccggaaggcagcc
tatgtgagatacctcaatagctcagccttcttcttctcagggttctttgtggtattttta
tctgtgcttccttatgcactgctcaaaggaatcatccttcgaaaaatattcacaaccatc
tcattctgcatcgttttgcgcatggcagttactcggcagttcccctgggcagtacaaact
tggtatgattctcttggagcaataaacaaaatacaggatttcttacaaaagcaagaatat
aagacattggaatataacttgacaactacagatgtagtgatggagaatgtaacagccttc
tgggaggagggatttagtaaattatttgagaaagcaaaagaaaataataatgatagaaaa
atttctaatggtgataccagcctcttcttcagtaacttacttctcggtactcctgtcctg
aaagatatcagtttcaagatagaaagaggacagttgttggcagttgctggatctacggga
gcaggcaagacttcacttctcatgatgattatgggagaattggaaccttcagagggtaaa
attaagcacagtggaagaatttcattctgctctcagtattcctggatcatgcctggaacc
attaaagataatatcatctttggtgtttcctatgatgaatatagatataggagtgtcatc
aaagcatgccaactagaagaggacatctccaagttttcagagaaagacaacatagttctt
ggagaaggtggaatcacactgagtggaggtcagcgagcaagaatttctttagcaagagca
gtatacaaagatgctgatttgtacctattagactccccttttggatatctagatgtttta
acagagaaagaaatatttgaaagctgtgtctgtaaattgatggctaacaaaactaggatt
ttggtcacttctaaaatggaacacttaaagaaagctgacaaaatattaattttacatgaa
ggtagcatctatttctatggtacattttctgaattacaaaatcagcggcctgacttcagc
tcgaagctcatgggatgtgacactttcgaccagtttactgcagaacgaagaaactcaatc
ataaccgagactttacggcgtttctcattagaaggagatacttctgtgtcctggaatgaa
acaaaaaagccttcttttaaacagactggagagtttggtgaaaaaaggaagaactccatt
ctcaattcaatcaactctataaggaaattttcagttgtacaaaagacttcattacaaatg
aatggtatcgatggagcttctgatgagcctttagagagaagactatccttagttccccat
tctgaacctggagaggggatcctgcctcagagcaatgcagtcaacagtggccccacattt
ctgggagggaggaggcagtcagttctgaaccttatgacctgctcctcagtgaaccaaggt
caaagcattcatcgaaagacagcaacatccacacgaaaaatgtcactggctcctcaggca
agcttagccgaaatagatatatattcaagacggttatctcaagatactggcttggaaata
agtgaagaaattaatgaagaagatttaagggattgcttttttgatgatgtggagaacata
ccagcagtgactacctggaacacataccttcgatatattaccgtccacaagagcttaatg
tttgtgctaatttggtgcttagttgtgtttctggttgaggtggctgcttctttggttgtg
ttgtgcctgtttccgaaaatactttttcaagacaaaggaaatggtactaagagtggaaat
aacagttatgcagtgatcatcaccagcaccagctcgtattatattttttacatttatgtg
ggagtagctgacactttgcttgccctaggactcttcagaggtttaccactggtgcatact
ctaatcacagtgtcgaaaactttacaccacaaaatgctacagtctgttcttcaagcccct
atgtcaaccctcaacacgttgaaaacaggtgggattcttaatagattctccaaagatata
gcagttttggatgatcttctgcctcttaccatatttgacttcattcagttgttattaatt
gtgattggagctgtggtggtcgtctccgttttacaaccctacatcttcctagctacagtg
ccagtgatagcggcttttattctcttgagagcctacttcctccacacctcccagcaactc
aagcagctggaatctgaaggcaggagtccaattttcactcatcttgttacaagcttaaaa
ggactatggacacttcgtgcctttggacggcagccttactttgaaactttattccacaaa
gctctgaatttacatactgccaactggtttttatatctgtcaacactgcgctggttccaa
atgagaatagaaatgatttttgtcattttcttcattgctgttaccttcatttccatttta
acaacaggtgaaggagaaggaagagttgggattattctaactttagccatgaatatcatg
ggtacattgcagtgggctgtaaactctagcatagatgtggatagcttgatgcgatctgtg
agccgagtttttaagtttattgatatgccaacagaagatggtaaacctaacaattcattc
agaccatccaaagatagtcaaccctcaaaagttatgatcatcgagaatcaacatgtgaag
aaagatgacatctggccctcagggggccaaatgactgtcaaagacctcacagcaaagtac
atagatggagggaatgccatactagagaacatatccttctcaataagtcccggccagagg
gtgggcctcttgggaagaactggatcagggaagagcactttgttactggcttttttgaga
ctgctgaataccaaaggagaaatccaaatagatggtgtgtcttgggattcaattactttg
caacaatggaggaaggcctttggagtcataccacagaaagtattcatcttttctggaaca
tttagaaaaaacttggatccctatgaacagtggagtgatcaagaaatatggaaagttgca
gatgaggtcggactcagatctgtgatagagcagtttcctgggaagcttgattttgtcctt
gtggatgggggttgtgttctaagccacggccacaagcagttgatgtgcttggccagatct
gttctcagtaaagcaaagatcttgctgcttgatgaacccagtgctcatttggatccaata
acataccagatcattcgaagaaccctaaaacaagcatttgctgattgcacagtaatcctc
tctgaacacaggatagaagcaatgttggaatgtcaacgatttttggtcatagaggagaac
aaggtgcggcagtatgattccatccagaggatgctgagcgagaagagcctcttccggcag
gccatcagccccgcagaccgcctgaagctcttgccccaccggaactcgagcaggcagagg
tctcgggccaacatcgccgctctgaaggaggagacagaggaagaggtgcaggaaacaaag
ctgtag
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integrated database retrieval system
