Capricornis sumatraensis (Sumatran serow): 138080079
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Entry
138080079 CDS
T10522
Name
(RefSeq) phosphatidylcholine translocator ABCB4 isoform X1
KO
K05659
ATP-binding cassette, subfamily B (MDR/TAP), member 4 [EC:
7.6.2.2
]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum02010
ABC transporters
csum04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138080079
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
138080079
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csum02000
]
138080079
Enzymes [BR:
csum01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
138080079
Transporters [BR:
csum02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
138080079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Rad17
RsgA_GTPase
AAA_5
AAA
AAA_28
AAA_29
G-alpha
AAA_7
AAA_14
DUF815
APS_kinase
DUF87
nSTAND1
Zeta_toxin
DUF2207_C
NTPase_1
Motif
Other DBs
NCBI-GeneID:
138080079
NCBI-ProteinID:
XP_068829096
LinkDB
All DBs
Position
5:37854751..37927887
Genome browser
AA seq
1280 aa
AA seq
DB search
MDPEVGRIATFRITETREDGFELGVRSSQAKEKMKKVNLIGPLTLFRYSDWQDKLFMSFG
TIMAITHGSGLPLMMIVFGEMTDRFVNTGGNFSLPVNFSLAMLNPGKILEEEMTRYAYYY
SGLGAGVLVAAYIQVSFWTLAAGRQIKKIRQEFFHAILRQEIGWFDISDITELNTRLTDD
ISKISEGIGDKVGMFFQAIATFFAGFIVGFIRGWKLTLVIMAISPVLGLSTAVWAKILSA
FSDKELAAYAKAGAVAEEALGAIRTVIAFGGQKRELERYQKHLENAKRIGIKKAISANIS
MGTAFLLIYASYALAFWYGSTLVIAKEYTIGNAITVFFSILIGAFSIGQAAPCIDAFANA
RGAAYAIFAIIDNDPKIDSFSERGHKPDNIKGNLEFKDVHFSYPARPDVQILKGLNLKVE
SGQTVALVGNSGCGKSTVVQLVQRLYDPDVGRIIIDGQDIRTFNVKYLREIIGVVSQEPV
LFATTIAENIRYGRGNVTMDEIKQAVKEANAYEFIMRLPQKFDTLVGERGVQLSGGQKQR
IAIARALVRNPKILLLDEATSALDTESEAEVQAALDKAREGRTTIVIAHRLSTIRNADVI
AGFDDGIIVEQGSHRELMKKEGVYFRLANTQISGSQIQSEEFKVADEKPPMGLTHPIVRR
SLHKSLRSSRQYQNGFDVESSELDESVPPVSFLKILKLNKTEWPYLVVGTLCAVANGALQ
PAFSVIFSEMIAIFGPGDDEVKQQKCNMFSLLFLGLGIISFFTFFLQGFTFGKAGEILTT
RLRSMAFKAMLRQDMSWFDDHKNSTGALSTRLAMDASQVQGATGTRLALIAQNTANLGTG
IIIAFIYGWQLTLLLLSVVPIIAVSGIVEMKLLAGNAKRDKKELETAGKIATEAIENIRT
VVSLTQERKFESMYVEKLYGAYRNSVRKAHVYGLSFSTSQAFMYFSYAGCFRFGAYLIVN
GHMRFRDVILVFSAIVLGAVALGHASSFAPDYAKAKLSAAHLFKLFERQPLIDSHSEEGL
RPDKFEGNVTLNEVVFSYPTRPNVPVLRGLSLEVKKGQTLALVGSSGCGKSTVVQLLERF
YDPLAGTVFVEFGFQLLDGHEAKQLNIQWLRAQLGIVSQEPVLFDCSIADNIAYGDNSRP
VTMPEIVSAAKAANIHPFIETLPHKYETRVGDKGTQLSGGQKQRIAIARALIRHPRILLL
DEATSALDTESEKIVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIENGRVREHGTHQQ
LLAQRGIYFSMVTVQAGTQN
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggatccagaggtgggaaggatcgcaacattccggatcaccgagaccagggaggacgga
tttgaactgggcgtccgcagcagccaagctaaggaaaaaatgaagaaagtaaatttgatt
ggaccattaacattgtttcgatactctgattggcaggataagttatttatgtcttttggc
actatcatggccataactcatggatcaggtctgcccctcatgatgatagtatttggagaa
atgactgacagatttgttaatactggaggaaatttctcccttccagtgaatttttcgttg
gcaatgctaaatccaggcaaaattctggaagaagaaatgactagatatgcatattattat
tcaggattaggtgctggagttcttgttgctgcctatatacaggtttcattttggactttg
gcagctggccgacagattaagaaaattaggcaagagttttttcatgctattcttcgacaa
gaaataggctggtttgacatcagtgacatcactgaactcaatacacggctaacagatgac
atctccaaaatcagtgaaggaattggtgacaaggttggaatgttctttcaagcaatagcc
acgttttttgcaggattcatagtggggtttatcagaggatggaagcttactcttgtgata
atggccatcagccctgtcctgggactctctacagctgtttgggcaaagatactctcagcg
tttagtgacaaagaactggctgcgtatgcaaaagcaggtgccgtggcggaagaagctctg
ggggccatcaggactgtgatcgcttttgggggccagaagagagagctggagaggtatcag
aaacatttagaaaatgccaaaaggattggaattaaaaaagctatttcagcaaacatctct
atgggcactgccttcctgctaatatatgcatcgtatgcactggccttctggtatggatcc
actctagttatagccaaagaatacactattggaaatgcaattacagtctttttctcaatc
ctgattggagccttcagcattggacaggctgctccctgtattgatgcttttgccaatgca
agaggagcagcatatgcgatctttgctattattgataatgatcctaaaattgacagtttt
tcagagagaggacacaaaccagacaacatcaaagggaatttggagttcaaagatgttcat
ttctcttaccctgctcggcctgatgtccagatcttgaagggcctcaacctgaaggtagag
agcgggcagacggtggccctggttgggaacagcggctgtgggaagagcacagtagtccag
ctggtgcagaggctgtatgaccctgatgtggggaggattatcatcgatgggcaggatatt
aggacatttaatgtaaagtatctgagggaaataattggagtggtgagtcaggagccagtg
ctctttgctaccaccattgctgaaaatatccgttatggccgtggaaatgtcaccatggat
gaaataaagcaagctgtgaaggaagccaacgcctatgagtttatcatgagattaccacag
aaatttgacaccctggttggagagagaggggtccagctgagcggtggacagaagcagaga
atcgccatcgcccgggccctggttcgcaaccccaagatcctcctgctggacgaggccacc
tcagcgctggacacggagagtgaagctgaggttcaggcggccctggataaggcccgggaa
ggccggaccaccatagtgatagcacaccgactgtctacaatccgaaatgcagatgtcatc
gctggttttgacgatggaatcattgtggagcaaggaagccacagagaactaatgaagaag
gaaggggtctacttcaggcttgcaaacacgcagatttcaggaagccagatccagtcagaa
gaatttaaagtcgctgatgaaaagcctcccatgggtttgactcatcccatagttaggcgt
tctcttcataaaagcctgaggagttcccgacagtatcagaatggctttgatgtggaaagc
agtgaacttgatgaatctgtgccaccggtgtcttttctgaagatcctgaaactgaacaag
acagagtggccctacttagtggtgggaaccctgtgcgccgttgccaatggggcgctccag
ccggccttctcagtcatcttctcagaaatgatagcgatttttggaccaggagacgatgaa
gtgaagcagcagaaatgcaacatgttctcattgcttttcttaggcctgggaattatttcc
ttttttactttcttccttcagggcttcacgtttgggaaggctggtgagatcctcaccacg
aggcttcggtcaatggcttttaaagcgatgttgagacaggacatgagctggtttgatgat
cataaaaacagtacgggtgcactttctacaagacttgcgatggatgcctcccaagtccaa
ggggccactgggaccaggttggctctgattgcacagaatacagctaaccttggaactggt
attattatagcattcatctacggttggcaattaacccttttgctgctatcggttgttcca
attattgctgtatcaggaattgttgaaatgaaattgctggctggaaatgccaaaagagat
aaaaaggaactggaaactgctggaaagattgcaacagaggcaatagaaaatattaggaca
gttgtgtccttgacccaagaaagaaaatttgaatccatgtacgttgaaaaattgtatgga
gcttacaggaattctgtgcggaaggcacatgtctatgggcttagttttagtacttcccaa
gcatttatgtacttttcctatgctggttgtttccgatttggtgcctatctcatcgtaaat
ggacacatgcgcttcagagatgttattctggtgttctcagcgattgtgttgggcgctgtg
gctctaggacatgctagttctttcgctccagactatgctaaagccaagctgtctgcagcc
cacttattcaagctctttgaaagacaacctctgattgacagccacagtgaagaaggcctg
aggcccgataagtttgaagggaatgtgacacttaatgaagtcgtgttcagctaccccacc
cggccaaacgtacctgtgcttcgggggctgagcctggaggtgaagaagggccagacgctg
gccctggtgggcagcagcggctgcgggaagagcacggtcgtccagctcctggagcggttc
tatgaccccttggctggcacagtgtttgtggagtttggttttcagcttctagatggtcac
gaagcaaagcagctcaacatccagtggctcagagcccaacttggaatcgtgtcccaggag
cccgtcctgtttgactgcagcattgccgacaacattgcctatggggacaatagccggccc
gtaaccatgccagaaattgtgagcgcggccaaagcagccaacatccatcctttcattgag
accttgccccacaaatatgaaacaagagtgggagacaaggggactcagctttccgggggg
cagaaacagaggattgctatcgcccgagccctcatccgacacccccgcatcctgctgctg
gatgaagctacatcagcactggataccgaaagtgagaagattgtccaagaagccctggac
aaagcccgagagggccgcacctgcatcgtgatcgctcaccggctgtccaccatccagaac
gcagacttgatagtggtgattgagaatggcagagtccgggagcacggcacacaccagcag
ctgctggcacagcgagggatctatttctctatggtcactgtccaggctgggacacagaac
tga
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