Capricornis sumatraensis (Sumatran serow): 138080870
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Entry
138080870 CDS
T10522
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csum04121
]
138080870 (TOPORS)
03036 Chromosome and associated proteins [BR:
csum03036
]
138080870 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csum03037
]
138080870 (TOPORS)
Enzymes [BR:
csum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138080870 (TOPORS)
Ubiquitin system [BR:
csum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138080870 (TOPORS)
UBL E3 ligases
138080870 (TOPORS)
Chromosome and associated proteins [BR:
csum03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
138080870 (TOPORS)
Cilium and associated proteins [BR:
csum03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
138080870 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI_Topors
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
138080870
NCBI-ProteinID:
XP_068829830
LinkDB
All DBs
Position
6:19616025..19626861
Genome browser
AA seq
1038 aa
AA seq
DB search
MRDKGSQQPPGSPLSREEGEAPPPTPAPEGRRSRRVRLRGSCRHRPSLLGRRELATSAPV
RPAPASSEIMASAAKEFKMDNFSPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDR
CLHKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFATPDVRR
FRYRTTMTRERSASVYSPSSTVNRRTTTPPDSGVLFEGLSISARPRDGEIPPFMRQISIR
PTTTDERSLRKIQEQDIINFRRTLYRAGARVRNIEDGGRYRDISAEFFRRNPACLHRLVP
WLKRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESQAFVSDLRPFLLNRTEHFIHEFISF
ARSPFNMAAFDQHANYDCPAPSYEEGSHSDSSVITISPDEAETQELDVNIATVSQAPWDD
ETPGPSYSSSEQVHAAMSSLLNTSDSSDEELVTARTTSQIQGVQTNEDLNNDSDSSSDNC
VIVGFVKPLAERTPELVELSSDSEVELGSYEKMETMKTQEQEQSYSSGDSDVSRCSSPRS
VVGKDEQISKGHCDSGTKINSKKEEKRSISLSSLRDLSSSLRGDRVYSPYTRRHRKRGRS
RSSDSHSQSRSGHDQKNRRKHHGKKRMKGKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS
QTLSLSSESSSRSRSRSSDRGKRRSRSRNRDRYYLRNNYGSRYKWEYTYYSRNKDRDGYE
SSYRRRTLSRAHYSRQSSSPELRIQSFSERTNARKKNNHSERKYYYYERHRSRSLSSSRS
KTASTGPDRVRNEKPGGKRKYKTRHLEGTSDVAQPSHEFASKVKEGHYSKSSSKLDGGYK
NESDSFSDSRSSDRETKHKRRKRRTRSLSVEIVYEGKATDTTRHHKKKKKKHKRKHKKHH
GDNASHSPVVITIDSDSDKDCEVKEDIECDSGGPQGPLQSEVLAPFESKDVVTIEDEFGV
LSKECDITILNNNLNNANKTVDNISPQAASIEQTLDVREESTLASDLENPPSNVSFQTEP
LRTSSLMSVSLGRDHDVS
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgcgagataaggggtcgcagcaaccgccggggtctccgctgtctcgcgaggagggtgaa
gcgcccccgcctactcccgctccggagggccggcgaagtcgtagagttcgccttcgtgga
tcctgccgtcaccgacccagccttctgggccgccgggaactggccacgagcgccccagtc
cggcctgcgccggcatcctctgagataatggcatcagccgctaaggaatttaaaatggac
aacttttcacctaaagctggcactagcaaattgcaacagacagtaccagctgatgcatct
cccgattctaagtgtcctatatgcttggatagatttgataatgtgtcttacttagatcgc
tgtttacataagttctgttttcgctgtgttcaggagtggtcaaaaaacaaagctgaatgc
ccactgtgtaagcagccctttgattctatttttcattctgtgagggcagaagatgacttc
aaggaatatgtcctgagaccttcgtacaatggctcttttgctactcctgatgtccgacga
ttccgctatcgcacaactatgacaagggaacgaagtgcttctgtttattcacctagtagt
accgtgaatagaagaacaacaactccaccagacagtggagtattatttgaagggttaagc
atttcagcaagacctagagatggtgaaattcctccatttatgaggcagatttcaataagg
ccaactactacagacgagagatctttgcggaaaattcaagaacaggatatcattaatttt
aggcgaactctctatcgtgctggtgctcgagttagaaatattgaagatggtggtcgctac
agggacatttcagctgaatttttccgtagaaatccagcttgccttcacagattagtcccc
tggttaaaacgtgaactgacagttctctttggagctcatggatctttagtgaatatcgtc
cagcacatcatcatgagtaatgttactcgctatgacttggagagtcaggcatttgtgtct
gatttgaggccatttttgcttaatcggactgagcattttatacatgaatttatcagtttt
gctcgctctccatttaacatggccgccttcgatcagcatgctaattatgattgccctgct
ccttcatatgaagaaggtagccattctgattcttcagtcataacaatatctccagatgaa
gctgagacccaagagctggatgttaatatagccactgttagtcaagcaccatgggatgat
gaaactccaggaccttcttactcaagctcagaacaggtgcatgctgccatgtcttccctt
ttaaatacttctgacagttcggatgaagaacttgtaacagcaagaactacatctcagata
caaggagtacagaccaatgaggacctaaataatgacagtgattcttcttcagataactgt
gtcattgtcggatttgttaagccgctagctgagaggaccccagaacttgttgaactgtcc
tctgattctgaggtggagttaggttcttatgagaaaatggagaccatgaagacacaagaa
caagagcagtcttacagctctggtgatagtgacgttagcagatgttcgtctccacgctct
gttgttggaaaggatgagcaaataagtaaaggtcattgtgattctggtacaaaaatcaac
tcaaagaaggaagagaaacgatctatatcattgtcttctctcagagacctgagctcatcc
ctcagaggagacagagtttattccccatatacccgcagacacagaaagaggggaagatca
agaagttcagattcacattcccagagtaggagtgggcatgatcagaagaaccgtagaaag
catcatgggaagaaaagaatgaaaggcaagcgatccagaagcagggagagtagtagacct
agaggtagaagagacaaaaagagatcaagaaccagagatagcagttggtcaagaagaagc
caaactctgtctctaagtagtgaaagctctagcagatcaaggtctcgtagcagtgatcgt
ggtaaaagaagatcacggagcagaaatcgagatcgttactatttgagaaataattatggc
agcagatacaagtgggagtatacttactatagtaggaacaaggacagggatggctacgag
tcatcttacaggaggaggactctgtccagagctcactattccagacaatcgtcaagtcca
gaacttagaattcagtccttttctgaaagaacaaatgctcggaagaaaaataatcacagt
gaaaggaaatactactactatgaaaggcatagatcgaggagcctatctagtagtaggtca
aagactgcatctacagggcctgaccgggtgagaaatgagaagcctggtgggaaacgaaaa
tacaaaacacggcatttggaggggaccagtgatgttgctcaaccatctcatgaatttgct
tctaaagtaaaggaaggtcattattcaaaatcttcgtcaaaattggatggaggctacaaa
aatgagagtgatagcttttcagatagccggtcatcagacagagagacaaagcacaagagg
agaaaaaggaggacccgcagcctgagtgtagagatagtttatgaagggaaagctaccgat
acaaccagacaccataaaaagaaaaagaagaaacataagaggaagcataagaaacaccat
ggtgataatgcttcacattccccagttgtgatcaccattgacagtgacagtgataaagac
tgtgaagtaaaggaggacatagaatgtgactctggtggtcctcaaggccctctccaaagt
gaagttttggctccctttgaatctaaagatgtagttacaatagaagatgaatttggtgtc
ctgagcaaggagtgtgatattaccatacttaataacaacttgaataatgccaataaaact
gtggataatatatcaccccaggcagcttcaattgaacaaactcttgatgtaagagaagag
agcaccttggcctctgatttggagaacccacccagtaatgtctcttttcagactgagcca
ttaaggacatcatcgttaatgtcagtgtctcttggtagagaccatgatgtgtcttaa
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