| Entry |
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|---|
| Symbol |
VPS13A
|
|---|
| Name |
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
|
|---|
| KO |
| K19525 | vacuolar protein sorting-associated protein 13A/C |
|
|---|
| Organism |
csum Capricornis sumatraensis (Sumatran serow)
|
|---|
| Brite |
Membrane trafficking [BR:csum04131]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
138081385 (VPS13A)
|
|---|
| SSDB |
|
|---|
| Other DBs |
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|---|
| LinkDB |
|
|---|
| Position |
6:61225060..61496850
|
|---|
| AA seq |
3173 aa
MVFESVVVDVLNRFLGDYVVNLDTSQLSLGIWAGAVALKNLEIKENALSQLDVPFKIKVG
HIGTLNLIIPWKNLYTQPVEAVLEDVYLLIVPSSRIKYDPIKEEKQLFEAKQQELKRIEE
AKRKVADQEKQHVEKQDTFTEKLITQIIKNLQVKISNIHIRYEDDVTNRENPLSFGISLQ
NLSMQTTDQYWIPCLHDETEKLFRKLVRLDNLFAYWNVKSQLFYLSNYDDSLSRLRSGIV
DENIVPEGYDFVFRPISANAKLQMNRRSDFDFSAPKIDLDVELHDITIELNKPQYFSFME
LLESVDMMTQNLPYRKFKPDVPLRYHAKEWWAYAIRGILEVNIRPYLRMWSWKHIREHRQ
KMKQYKELYKKKLTSKKPSGELLNSLEELEKTLDVFNITIVRQQAEVEVKKAGYRIFREG
AEESEGNKGWFSWMWNWSESHSKQQLDIKPGSLEEILTPKEKSLLYEAIGYSETAVDPTL
PKTFEAMKFFVHLKSMSIILREQQQKPELLDIVVEEFSTLIVQRPGAQAVKFETKIDSFH
VTGLPDNSTKPRLLSSLDDAGSLLKIMFEINPLDETVAQRCIIEAEPLEMLYDARTVNSI
VEFFRPPKEVNLAQLTSVTLTKLEEFRDKTATGLVYIIETQKVLDLKINLNASYIIIPQD
GIFSPTSNLLLLDLGHLKVTSKIRSELPDLKQGGANREEIMHRAYDSFDIQLTSIQLLFS
RVGDNWKEARKLNVSAQHILVPMHFNVELSKAMVFMDISMPKFKIYGNLPLVSLRISDKK
LQGILELIESIPKPPPAAEVNVPVKSSQVQRSTSFGTSQMSQKKFPLLEIPCVEDDSDEE
YFDAPCSPLEEPLQSPSRIKSPQQKKLQKPDCFKNMIEYKIRFEVPEVLIQFCHLVGDCE
LPVVEINVLGLGTDIEIRTFDLKANAFLKEVCLKCPDYFDEDKKPIYLITTLDNTMEDLL
TLEYVKAENNLPATILKNAYNSVVQLIKVNFSSLDIHLHTEALLNTINYFNNILPYLEEK
PAPVHIVETEDKGEVIKKIPLKSSKNEDTITLQILAELSCLQIFIQDQKCNISEIKIEGL
DCEIIMRPSVTETNAKLRNIIVLDSDITAIYKKAVYITGKEVFSFKMVSYVGATAGSAYT
DMNVVDMQVNLTVGCIEVVLVKKFLYSILAFIDNFQAGKQALAEATVQAAEMAATGVKEL
AQRSSRMALDVHIKAPVVVIPQSPVSENVFVADFGLITMKNTFHVITKSPTNPPPIIDLI
TIKLSEMRLYRTQYINDAYQEVLDLLLPLNLEVMVERNLSWEWFQEVPCFNVNAQLKPME
FILSQEDITTIFKTLYGNIWYEGDSASHEVTKDQSSVTSGATTASHHPAGTTVVTAAVVE
VHSHASQVKTTLNMSFRTDYLTMVLYSPGPKQTSFTDIRDPSLILAEFKLENIISTLKMC
TDDSTFSSFSLKNCILDDKRPHIKKATPRMIGLTVGFDKKDMMDVRYRTIRDGWVADIVL
QEMYICASVEFLLTVANVFLEAYTTGTAIETNVQTWSAKEEVPKQQSEKWEMNITIKNPE
IVFVADMTRNDAPALVITTQCEIYWLGDFENDTMTAAIKDLQVRACPFLPVKRKGKITTV
LQPCDLFCQATQISTDPQVLELSVKSLTLKVSPVIINTVITITSALYTAKETIPKETASS
TAHLWEKKDTKDLNMWFLEEPNEAVKRAPMPELVPKGEIIKMNIDSIFLVLEAGIGHRTV
PMLLAKSRFSGEGKNWSSLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNL
GIKMKKKAKKAIVESGTEEENYRVPEYKTVITFYSKDQLNITLSKCGLIMLNNLAEAFTE
AATGSSATFIRDLAPFMILNSLGLSISVSPSESFSVLNVPMAKSYVLKNEESLSMDYMRT
KDNDHFNAMTSLSSKHFFILLTPANHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQID
AVEGSKKVTIRSPVQIRNHFSIPLSVYGGDTLLGTASPGSEFNIPLASYRSLLSLKPEDA
DYQMCEGIDFEEMIKQDGTSFKKKCRPINPSRKPFIIHIVPEKDNLTYMSVYSEDHWDLP
YIIHLWPPILLRNLLPYKIAYYIEGIEHRVFTLHEGHSAQLCTVQLDKARLHLKLLDYLN
HDWKSEYHIKPNQQDISFISFTCVTEIEKTDLDIAVHVTYNTGQTVMAFHSPYWMVNKTG
RMLQYKADGIHRKHPPNYKKPVLFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHGA
VKCKGPKMEYQVGVTIDLSSFNITRIVTFTPFFLIKNKSKYHISVAEEGNDKWLSVDLEQ
CVPFWPEDASNKLLIQVERSESPPQKIHFNKEESCILLHLDNKLGGIIAEVNLAEHSTVI
TFSDYRDGAATFLLINHTKNDIVQYKQSSLSEIEDSLPPGKAVFYTWADPVGSRKLKWEC
GKSHGEVTQKDDMMTPINLGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAEQ
EIVLALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEKEFK
EYAESSPSEDKVIELDTNILVCFTPGATNMKILQPHVIAIRRNYLPALKVEYSTSAHQSS
FRIQIYRIQIQNQIHGAIFPFVFYPIKPPKSVTLDSAPKPFTDVSIVMRSAGHSQISRIK
YFKVLIQEMDLRLDLGFVYAVSELMTPAEVTEKTEVELFHKDIESFQEEYKIVSLVDSSQ
VSLYEYFHISPIKLHLSVSLSSGGEEAKDSEQHEGLMAIHSLNLLLKSIGATLTDVQDVV
FKLAFFELNYQFHTTAELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEA
FFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQ
QKRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGATGFFKGVGKGL
VGAVTRPTGGIIDMASSTFQGIKRATETSSEVESLRPPRFFNEDGVIRPYRLRDGTGNQM
LQVIENGRFAKYKYFTHVMINKTDMLMITKSGVLFVTKGTFGQLTCEWQYSFDEFTKEPF
IVHERRLRIEAKERVKSVFHAKEFGKIVNFRTPEDARWILRKLEEAREPSPNL |
|---|
| NT seq |
9522 nt +upstreamnt +downstreamnt
atggtgttcgagtcggtggtcgtggacgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctcagtctgggcatctgggcaggagctgtggccctgaagaat
cttgaaattaaagaaaatgccctgagtcaactggatgtaccatttaaaattaaagttggc
catataggtactcttaatcttataattccgtggaaaaacctttatacccaaccagttgaa
gctgtattagaagacgtttatttactcatagtgccttcttctagaataaaatatgatcct
ataaaggaagaaaaacaactctttgaagcaaagcaacaggaattgaaaagaatagaagaa
gcaaaacgaaaagtagctgatcaagaaaaacagcatgtggagaaacaggatactttcaca
gaaaaattaattacccagatcataaaaaatcttcaagtgaaaatttccaacatccatatt
cgctatgaagatgatgtcacaaatcgagaaaaccctctgtcatttggtatttcccttcag
aatctcagcatgcagacaactgatcaatactggattccatgtttacatgatgaaactgag
aaactatttcgtaagttagtccgattggataacctttttgcctattggaatgtgaagtct
cagctgttttatcttagtaattatgatgactcattgagcagactgaggagtggcattgtt
gatgaaaatattgttccagaaggttatgattttgtatttcgccccatatctgctaatgcc
aaacttcagatgaatcgcagatcggattttgacttttctgcccccaaaatagacctggat
gttgagttacatgacataacaattgaacttaataaaccacagtatttcagttttatggaa
cttcttgaatcggttgatatgatgacgcaaaatctgccatacaggaaattcaaacctgat
gtacctcttcgttaccatgccaaagaatggtgggcttatgctatacgtggcattcttgaa
gtaaacattcgcccctacttacggatgtggtcctggaagcatattagagaacataggcaa
aaaatgaagcaatataaagaactgtataaaaaaaagctaacaagtaagaagccatctggt
gaacttctcaactctttggaggagttggaaaagactttggatgtatttaatataactata
gtaagacaacaggccgaagttgaggtaaagaaagctggatacaggattttcagagaagga
gcagaagagtcagagggtaataaaggatggtttagctggatgtggaattggtcagaatcg
cacagtaaacaacaactagatattaaacctggaagtcttgaagaaatattgacacctaaa
gaaaaaagtttgctgtatgaagcaattggctatagtgaaacagcagtcgatccaacctta
ccaaaaacatttgaagcaatgaagttttttgttcacttgaaaagtatgtctatcattcta
agagaacaacaacaaaaacctgaactgctagatattgtagtggaagaatttagtactttg
attgtgcaaagaccaggagcacaagcagttaaatttgaaaccaaaatagattcatttcat
gttactggcttaccagataactcaacaaaaccccgcctcctgtcttcattagatgatgct
ggatcactcttgaaaattatgtttgagataaatcctttagatgaaactgttgctcagagg
tgtatcatagaagctgaacctttagaaatgttatatgatgcaagaacagtgaatagtata
gtagaattcttcagacctccaaaagaggtaaatctagcacagctgacttcagtaactttg
acaaaacttgaagaatttcgtgataagacagcaacaggtctggtatatattattgaaaca
cagaaagttcttgatctcaaaattaacttgaatgcttcatatatcattatcccacaagat
ggtatctttagccctacatcaaatctccttcttttggatcttggacatctaaaggtgaca
agtaaaattcgttcagaattaccagatttaaaacaaggtggagccaatcgtgaagagata
atgcatagagcttatgattcctttgatattcagcttacaagcatacagctgcttttcagc
agagttggtgataactggaaagaagcacgaaaactcaatgtgtctgcacagcatatcttg
gtacctatgcacttcaatgtggagctctctaaggccatggttttcatggatataagtatg
cccaaattcaagatttatggaaacttaccattagtttctttacgaatctcagataaaaaa
cttcaagggattttggaactgattgaaagcattccaaaacccccacctgcagctgaagta
aatgtgcctgtcaaatcatctcaggttcaaagatccacttctttcggaacatcacagatg
tcacagaagaaattccctcttttggaaattccatgtgttgaagatgattcagatgaggag
tattttgatgcaccatgtagtccgttggaagagcctcttcaatctccatctagaattaaa
agtcctcaacagaaaaagcttcagaaaccagattgttttaaaaatatgattgagtataaa
ataagatttgaagtgccagaggttttgattcagttctgtcaccttgttggagactgtgaa
ctacctgtggtagaaattaatgtcttaggattgggcacagatattgagattagaacattt
gatttgaaagcaaatgcctttttgaaagaggtctgcttaaaatgtccagattattttgat
gaagacaagaaaccaatttatttgattacaacactggataacacaatggaagatctctta
acactggaatatgtgaaggctgaaaataatttacccgcaacaatattgaagaatgcttat
aacagtgttgtgcaactgataaaggtgaatttttcctctttggatattcatttacatact
gaagcacttctgaatacaataaattattttaataatatccttccatatttggaggaaaaa
ccagccccagtacatattgtggagactgaagacaaaggggaggttatcaaaaaaatacct
ttaaaatcatccaagaatgaagatactattaccttgcagattttagcagaattatcatgt
ttacagatctttattcaagatcagaaatgtaacatttccgaaattaagatagaagggctt
gattgtgaaatcattatgaggccatcagtgactgaaacaaatgcaaagctaaggaatata
attgtcctggactctgacataacagctatatacaaaaaggctgtttatattaccggtaaa
gaagttttcagcttcaaaatggtttcttatgtgggtgcaactgctggttctgcatacaca
gatatgaatgtagttgatatgcaagttaatttaactgttggttgcattgaagtagttctt
gtcaaaaaatttctgtattctatattggcttttatagataattttcaagcaggtaaacaa
gccttagctgaggcaactgttcaggcagcagaaatggctgctactggtgtaaaagaactg
gcacaaaggagttctagaatggcattggatgttcacatcaaagcccctgttgtggttatc
ccacagtctccagtttctgaaaatgtttttgttgctgattttggactaattacaatgaaa
aatacattccatgtaataacaaagagtccgaccaaccccccacccattattgatttgata
acgataaagctaagtgaaatgcgactatacaggactcaatatattaatgatgcataccag
gaagtactggatctactattgccattaaatcttgaggtgatggttgagcgaaatttatca
tgggagtggttccaggaagttccttgtttcaatgtaaatgctcagctaaagcccatggag
ttcattcttagtcaagaagatataacgaccatttttaaaacattatatggcaacatatgg
tatgaaggtgatagtgcttcacatgaagtaacaaaagatcagtccagcgttactagtggt
gctactactgcttcacaccatccagcaggaacaactgtagtgacagctgctgtggtagaa
gtacattcacatgcttctcaagttaagacaacactaaatatgagtttcagaaccgattat
ctcaccatggtactgtacagtccaggtcctaaacagacttcctttacagatattcgtgat
ccttccctgatacttgctgaatttaagttggagaatattataagcactttaaaaatgtgt
acagatgactcaacattttcttccttctcattaaaaaactgtattttagatgataaaagg
ccccatatcaagaaggcaactcctagaatgataggactgacagttgggtttgacaaaaag
gacatgatggatgtaaggtataggacaatccgagatggttgggtggctgatatagtcctt
caagaaatgtatatttgtgcaagtgtggaatttctgctgacagttgcaaatgtctttctt
gaggcctacactacaggcactgctatagaaaccaatgttcaaacatggtctgctaaagaa
gaagtacctaaacagcaatcagaaaagtgggaaatgaatatcactattaaaaatcctgaa
attgtgtttgtcgctgatatgacaagaaatgatgctcctgccttagtcattacaacacag
tgtgaaatatattggctaggtgactttgaaaatgatacaatgactgctgccattaaagat
ctccaagtgagagcatgcccatttcttccagtcaagagaaaaggaaaaatcactactgtt
ttgcaaccctgtgacttgttctgtcaagctactcagataagtacagatccacaagtactt
gaattatcagtaaaatccctgacactgaaggtttcaccagttatcataaatactgtgatt
accataacttcagcactttatactgccaaggaaaccatcccaaaagaaactgcttcttct
acagcacatttatgggaaaagaaggatacaaaagatttaaatatgtggtttcttgaagaa
ccaaatgaagctgtaaaaagagctcccatgcctgaattggtacccaaaggagagataata
aaaatgaacattgattctatttttctagttcttgaggctggaattggtcatagaacagta
cctatgctattggcaaaatcacgtttctcaggggaaggcaaaaactggagctccttaata
aatctccactgtcaacttgagctagaagtacattattacaatgaaatgtttggtgtgtgg
gagccattgcttgaacccttagaaattgatcagactgaggattttagaccatggaatctt
ggaatcaagatgaaaaagaaagccaaaaaggccattgttgagtcaggcactgaagaagaa
aattacagagtaccagaatataaaactgtcatcactttctattcaaaagaccagctaaac
attacattatctaaatgtggccttataatgttaaataatttagctgaggcatttacagaa
gctgccactggatcttcagctaccttcataagggatctggcaccttttatgattttaaat
tctcttggacttagtatttctgtttcaccaagtgaatcttttagtgtactcaacgtacct
atggcaaaatcatatgtattgaaaaatgaggagagtttaagtatggattatatgcgaact
aaagacaatgatcatttcaatgcaatgaccagcctaagcagcaaacacttcttcattctt
cttacacctgctaaccactctactgctgataaaatccctttaacaaaagtgggacgacga
ctgtacactgtaagacacagagagtctggagttgaaagatcaattgtttgtcaaattgat
gcagtggaaggaagtaagaaggtaacaattcgctctccagtgcagattagaaatcatttt
tcaataccactttctgtttatggaggagacacgttattgggaacggcttcacctggaagt
gaatttaacatacccttagcatcttaccgatcactactttctctgaagccagaagatgca
gactatcagatgtgtgaaggaattgactttgaagaaatgataaaacaagatggtacttct
ttcaagaagaaatgtagacctataaacccttccaggaagccatttatcattcatatagtc
ccagaaaaagataatttgacatatatgtcagtgtattcagaagaccattgggacttacca
tacataatacatttgtggccacctattctactccgaaatcttcttccttacaaaattgct
tattacatagaggggattgaacatagagtttttactctccatgaaggccattcagcacag
ctttgtactgtacagttggataaagccaggctacatttaaaattacttgactatcttaat
catgattggaaaagtgaatatcatataaaacctaatcaacaagatattagtttcatcagt
tttacttgtgttacagaaatagaaaagactgatttagatattgctgtccatgtgacttat
aatactgggcagactgttatggcatttcatagtccttattggatggttaataaaactggt
cgaatgttacagtataaagcagatggaattcatcgaaagcatccacctaattataaaaag
ccagttctcttttcatttcagccaaagcactttttcaataacaataaggttcagcttatg
gtaactgatagtgaattgtcagatcaattttcaattgatacagttggtagtcatggagct
gttaaatgtaaaggccccaaaatggaatatcaagttggtgtcactatagaccttagcagt
tttaacattaccagaattgtcacatttacccccttttttttgattaaaaacaaaagcaaa
tatcatatatcagtggctgaagagggaaatgataaatggctctctgttgatttggagcag
tgtgtccccttttggcctgaggatgcttctaataaacttcttattcaagttgaaagaagt
gaaagccctccccaaaagatacattttaataaggaagaaagttgtattttactgcatcta
gacaataaacttggaggtattatagcagaagttaatttggctgagcattctacagttatt
acattttcagattatcgtgatggagccgctacatttctgttaataaatcacaccaagaat
gacattgttcagtataagcaaagttccctcagtgaaatagaagattccctccctcctgga
aaagcagtattttatacatgggctgatccagtgggctctagaaagctgaagtgggaatgt
ggaaaaagccacggtgaagtaacacaaaaggatgatatgatgacacctataaatttggga
aaaaagaccatttatttagtttcattttttgaaggcttacaacgcataattttattcact
gaagatccaagagtatttaaagtgacatatgaaagtgagaaagcagagttagcagagcaa
gaaattgtgttggcattacaagatgttgggatttctcttgtcaacaattatacaaagcaa
gaagtagcctatattggcattacaagttctgatgtggtttgggagacaaagcccaagaag
aaggcaagatggaagccaatgagtgtaaagcacactgagaagttagagaaggaatttaag
gaatatgctgaatcttcaccgtcagaagataaggttattgagttggacactaacattctg
gtttgcttcacacctggtgctactaacatgaaaattctgcagccacatgtaatagctata
agaagaaattatcttccagcattaaaagtagaatatagcacatctgcacatcagtcatcg
tttagaattcaaatttatagaatacagatccaaaaccaaatacatggtgctatatttcca
tttgtgttttatcccattaaacctcccaagtccgtcaccttggattcagcaccaaaaccc
tttactgatgtcagtattgtcatgagatctgcaggacattcacagatatcacgtattaag
tatttcaaagtgttaatccaagaaatggatctcaggttagatcttggatttgtctatgct
gtatcagaacttatgacaccagctgaagtcactgaaaaaacagaggttgagctttttcat
aaagacatagaatctttccaagaagaatataaaatagtctcattagtagattcatcacaa
gtcagtctctatgaatactttcatatatctcctatcaagttgcatttaagtgtttcactg
agttcaggcggtgaagaagcgaaagattcagaacagcatgaaggactgatggcaattcat
tctttaaatcttttgctgaagagtattggtgccactctcacagatgtacaagatgtagtt
tttaagctagcattttttgaactcaattatcagttccatacaacagctgaactacagtct
gaagtaataagacactattcaaagcaggccattaaacagatgtatgtactcattcttgga
cttgatgttttgggaaatccctttggcttgataagagaattttctgaaggtgtagaagca
tttttttatgaaccttaccagggagccatccagggtcctgaagagtttgtggaaggaatg
gcactgggactgaaagcactagttggtggagctgttggtggactagctggtgctgcctcc
aaaatcaccagtgctatggctaaaggggtggcagccatgactatggatgaagactaccaa
cagaagagaagagaagccatgaacaagcaaccagctggtcttagagaaggcatcactcgt
ggaggaaaaggcttagtttctggttttgtaagtggcataacaggaattgttacaaaacca
atcaaaggagctcagaaagaaggagcaactggtttctttaaaggtgttgggaaaggttta
gttggagcagtgacaaggccaactggaggcatcatagacatggctagcagtacatttcag
ggaataaaaagagcgacagagacttcatcagaagtggagagtctgcgaccccctaggttc
tttaatgaagatggagttatcagaccttacaggttgagggatggtactggaaatcaaatg
ttacaggtcatcgaaaatggaagatttgcaaaatacaaatattttacccatgtcatgatc
aataagacagacatgttaatgattaccaaaagtggcgtattgtttgtaacaaaaggaaca
tttggacagcttacttgtgagtggcaatatagttttgatgagtttaccaaagagccattc
attgttcatgagagaagactgcgcatcgaagcaaaggaacgggtgaagtctgtattccat
gccaaagagtttggaaaaatagttaacttcagaaccccagaggatgcaaggtggatcctc
agaaagctagaagaagcaagagaaccttccccgaacctctga |
|---|
