Capricornis sumatraensis (Sumatran serow): 138081385
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Entry
138081385 CDS
T10522
Symbol
VPS13A
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
138081385 (VPS13A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csum04131
]
138081385 (VPS13A)
Membrane trafficking [BR:
csum04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
138081385 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
ATG2_CAD
RRM_fung
Mer2
Motif
Other DBs
NCBI-GeneID:
138081385
NCBI-ProteinID:
XP_068830626
LinkDB
All DBs
Position
6:61225060..61496850
Genome browser
AA seq
3173 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLSLGIWAGAVALKNLEIKENALSQLDVPFKIKVG
HIGTLNLIIPWKNLYTQPVEAVLEDVYLLIVPSSRIKYDPIKEEKQLFEAKQQELKRIEE
AKRKVADQEKQHVEKQDTFTEKLITQIIKNLQVKISNIHIRYEDDVTNRENPLSFGISLQ
NLSMQTTDQYWIPCLHDETEKLFRKLVRLDNLFAYWNVKSQLFYLSNYDDSLSRLRSGIV
DENIVPEGYDFVFRPISANAKLQMNRRSDFDFSAPKIDLDVELHDITIELNKPQYFSFME
LLESVDMMTQNLPYRKFKPDVPLRYHAKEWWAYAIRGILEVNIRPYLRMWSWKHIREHRQ
KMKQYKELYKKKLTSKKPSGELLNSLEELEKTLDVFNITIVRQQAEVEVKKAGYRIFREG
AEESEGNKGWFSWMWNWSESHSKQQLDIKPGSLEEILTPKEKSLLYEAIGYSETAVDPTL
PKTFEAMKFFVHLKSMSIILREQQQKPELLDIVVEEFSTLIVQRPGAQAVKFETKIDSFH
VTGLPDNSTKPRLLSSLDDAGSLLKIMFEINPLDETVAQRCIIEAEPLEMLYDARTVNSI
VEFFRPPKEVNLAQLTSVTLTKLEEFRDKTATGLVYIIETQKVLDLKINLNASYIIIPQD
GIFSPTSNLLLLDLGHLKVTSKIRSELPDLKQGGANREEIMHRAYDSFDIQLTSIQLLFS
RVGDNWKEARKLNVSAQHILVPMHFNVELSKAMVFMDISMPKFKIYGNLPLVSLRISDKK
LQGILELIESIPKPPPAAEVNVPVKSSQVQRSTSFGTSQMSQKKFPLLEIPCVEDDSDEE
YFDAPCSPLEEPLQSPSRIKSPQQKKLQKPDCFKNMIEYKIRFEVPEVLIQFCHLVGDCE
LPVVEINVLGLGTDIEIRTFDLKANAFLKEVCLKCPDYFDEDKKPIYLITTLDNTMEDLL
TLEYVKAENNLPATILKNAYNSVVQLIKVNFSSLDIHLHTEALLNTINYFNNILPYLEEK
PAPVHIVETEDKGEVIKKIPLKSSKNEDTITLQILAELSCLQIFIQDQKCNISEIKIEGL
DCEIIMRPSVTETNAKLRNIIVLDSDITAIYKKAVYITGKEVFSFKMVSYVGATAGSAYT
DMNVVDMQVNLTVGCIEVVLVKKFLYSILAFIDNFQAGKQALAEATVQAAEMAATGVKEL
AQRSSRMALDVHIKAPVVVIPQSPVSENVFVADFGLITMKNTFHVITKSPTNPPPIIDLI
TIKLSEMRLYRTQYINDAYQEVLDLLLPLNLEVMVERNLSWEWFQEVPCFNVNAQLKPME
FILSQEDITTIFKTLYGNIWYEGDSASHEVTKDQSSVTSGATTASHHPAGTTVVTAAVVE
VHSHASQVKTTLNMSFRTDYLTMVLYSPGPKQTSFTDIRDPSLILAEFKLENIISTLKMC
TDDSTFSSFSLKNCILDDKRPHIKKATPRMIGLTVGFDKKDMMDVRYRTIRDGWVADIVL
QEMYICASVEFLLTVANVFLEAYTTGTAIETNVQTWSAKEEVPKQQSEKWEMNITIKNPE
IVFVADMTRNDAPALVITTQCEIYWLGDFENDTMTAAIKDLQVRACPFLPVKRKGKITTV
LQPCDLFCQATQISTDPQVLELSVKSLTLKVSPVIINTVITITSALYTAKETIPKETASS
TAHLWEKKDTKDLNMWFLEEPNEAVKRAPMPELVPKGEIIKMNIDSIFLVLEAGIGHRTV
PMLLAKSRFSGEGKNWSSLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNL
GIKMKKKAKKAIVESGTEEENYRVPEYKTVITFYSKDQLNITLSKCGLIMLNNLAEAFTE
AATGSSATFIRDLAPFMILNSLGLSISVSPSESFSVLNVPMAKSYVLKNEESLSMDYMRT
KDNDHFNAMTSLSSKHFFILLTPANHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQID
AVEGSKKVTIRSPVQIRNHFSIPLSVYGGDTLLGTASPGSEFNIPLASYRSLLSLKPEDA
DYQMCEGIDFEEMIKQDGTSFKKKCRPINPSRKPFIIHIVPEKDNLTYMSVYSEDHWDLP
YIIHLWPPILLRNLLPYKIAYYIEGIEHRVFTLHEGHSAQLCTVQLDKARLHLKLLDYLN
HDWKSEYHIKPNQQDISFISFTCVTEIEKTDLDIAVHVTYNTGQTVMAFHSPYWMVNKTG
RMLQYKADGIHRKHPPNYKKPVLFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHGA
VKCKGPKMEYQVGVTIDLSSFNITRIVTFTPFFLIKNKSKYHISVAEEGNDKWLSVDLEQ
CVPFWPEDASNKLLIQVERSESPPQKIHFNKEESCILLHLDNKLGGIIAEVNLAEHSTVI
TFSDYRDGAATFLLINHTKNDIVQYKQSSLSEIEDSLPPGKAVFYTWADPVGSRKLKWEC
GKSHGEVTQKDDMMTPINLGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAEQ
EIVLALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEKEFK
EYAESSPSEDKVIELDTNILVCFTPGATNMKILQPHVIAIRRNYLPALKVEYSTSAHQSS
FRIQIYRIQIQNQIHGAIFPFVFYPIKPPKSVTLDSAPKPFTDVSIVMRSAGHSQISRIK
YFKVLIQEMDLRLDLGFVYAVSELMTPAEVTEKTEVELFHKDIESFQEEYKIVSLVDSSQ
VSLYEYFHISPIKLHLSVSLSSGGEEAKDSEQHEGLMAIHSLNLLLKSIGATLTDVQDVV
FKLAFFELNYQFHTTAELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEA
FFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQ
QKRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGATGFFKGVGKGL
VGAVTRPTGGIIDMASSTFQGIKRATETSSEVESLRPPRFFNEDGVIRPYRLRDGTGNQM
LQVIENGRFAKYKYFTHVMINKTDMLMITKSGVLFVTKGTFGQLTCEWQYSFDEFTKEPF
IVHERRLRIEAKERVKSVFHAKEFGKIVNFRTPEDARWILRKLEEAREPSPNL
NT seq
9522 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggacgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctcagtctgggcatctgggcaggagctgtggccctgaagaat
cttgaaattaaagaaaatgccctgagtcaactggatgtaccatttaaaattaaagttggc
catataggtactcttaatcttataattccgtggaaaaacctttatacccaaccagttgaa
gctgtattagaagacgtttatttactcatagtgccttcttctagaataaaatatgatcct
ataaaggaagaaaaacaactctttgaagcaaagcaacaggaattgaaaagaatagaagaa
gcaaaacgaaaagtagctgatcaagaaaaacagcatgtggagaaacaggatactttcaca
gaaaaattaattacccagatcataaaaaatcttcaagtgaaaatttccaacatccatatt
cgctatgaagatgatgtcacaaatcgagaaaaccctctgtcatttggtatttcccttcag
aatctcagcatgcagacaactgatcaatactggattccatgtttacatgatgaaactgag
aaactatttcgtaagttagtccgattggataacctttttgcctattggaatgtgaagtct
cagctgttttatcttagtaattatgatgactcattgagcagactgaggagtggcattgtt
gatgaaaatattgttccagaaggttatgattttgtatttcgccccatatctgctaatgcc
aaacttcagatgaatcgcagatcggattttgacttttctgcccccaaaatagacctggat
gttgagttacatgacataacaattgaacttaataaaccacagtatttcagttttatggaa
cttcttgaatcggttgatatgatgacgcaaaatctgccatacaggaaattcaaacctgat
gtacctcttcgttaccatgccaaagaatggtgggcttatgctatacgtggcattcttgaa
gtaaacattcgcccctacttacggatgtggtcctggaagcatattagagaacataggcaa
aaaatgaagcaatataaagaactgtataaaaaaaagctaacaagtaagaagccatctggt
gaacttctcaactctttggaggagttggaaaagactttggatgtatttaatataactata
gtaagacaacaggccgaagttgaggtaaagaaagctggatacaggattttcagagaagga
gcagaagagtcagagggtaataaaggatggtttagctggatgtggaattggtcagaatcg
cacagtaaacaacaactagatattaaacctggaagtcttgaagaaatattgacacctaaa
gaaaaaagtttgctgtatgaagcaattggctatagtgaaacagcagtcgatccaacctta
ccaaaaacatttgaagcaatgaagttttttgttcacttgaaaagtatgtctatcattcta
agagaacaacaacaaaaacctgaactgctagatattgtagtggaagaatttagtactttg
attgtgcaaagaccaggagcacaagcagttaaatttgaaaccaaaatagattcatttcat
gttactggcttaccagataactcaacaaaaccccgcctcctgtcttcattagatgatgct
ggatcactcttgaaaattatgtttgagataaatcctttagatgaaactgttgctcagagg
tgtatcatagaagctgaacctttagaaatgttatatgatgcaagaacagtgaatagtata
gtagaattcttcagacctccaaaagaggtaaatctagcacagctgacttcagtaactttg
acaaaacttgaagaatttcgtgataagacagcaacaggtctggtatatattattgaaaca
cagaaagttcttgatctcaaaattaacttgaatgcttcatatatcattatcccacaagat
ggtatctttagccctacatcaaatctccttcttttggatcttggacatctaaaggtgaca
agtaaaattcgttcagaattaccagatttaaaacaaggtggagccaatcgtgaagagata
atgcatagagcttatgattcctttgatattcagcttacaagcatacagctgcttttcagc
agagttggtgataactggaaagaagcacgaaaactcaatgtgtctgcacagcatatcttg
gtacctatgcacttcaatgtggagctctctaaggccatggttttcatggatataagtatg
cccaaattcaagatttatggaaacttaccattagtttctttacgaatctcagataaaaaa
cttcaagggattttggaactgattgaaagcattccaaaacccccacctgcagctgaagta
aatgtgcctgtcaaatcatctcaggttcaaagatccacttctttcggaacatcacagatg
tcacagaagaaattccctcttttggaaattccatgtgttgaagatgattcagatgaggag
tattttgatgcaccatgtagtccgttggaagagcctcttcaatctccatctagaattaaa
agtcctcaacagaaaaagcttcagaaaccagattgttttaaaaatatgattgagtataaa
ataagatttgaagtgccagaggttttgattcagttctgtcaccttgttggagactgtgaa
ctacctgtggtagaaattaatgtcttaggattgggcacagatattgagattagaacattt
gatttgaaagcaaatgcctttttgaaagaggtctgcttaaaatgtccagattattttgat
gaagacaagaaaccaatttatttgattacaacactggataacacaatggaagatctctta
acactggaatatgtgaaggctgaaaataatttacccgcaacaatattgaagaatgcttat
aacagtgttgtgcaactgataaaggtgaatttttcctctttggatattcatttacatact
gaagcacttctgaatacaataaattattttaataatatccttccatatttggaggaaaaa
ccagccccagtacatattgtggagactgaagacaaaggggaggttatcaaaaaaatacct
ttaaaatcatccaagaatgaagatactattaccttgcagattttagcagaattatcatgt
ttacagatctttattcaagatcagaaatgtaacatttccgaaattaagatagaagggctt
gattgtgaaatcattatgaggccatcagtgactgaaacaaatgcaaagctaaggaatata
attgtcctggactctgacataacagctatatacaaaaaggctgtttatattaccggtaaa
gaagttttcagcttcaaaatggtttcttatgtgggtgcaactgctggttctgcatacaca
gatatgaatgtagttgatatgcaagttaatttaactgttggttgcattgaagtagttctt
gtcaaaaaatttctgtattctatattggcttttatagataattttcaagcaggtaaacaa
gccttagctgaggcaactgttcaggcagcagaaatggctgctactggtgtaaaagaactg
gcacaaaggagttctagaatggcattggatgttcacatcaaagcccctgttgtggttatc
ccacagtctccagtttctgaaaatgtttttgttgctgattttggactaattacaatgaaa
aatacattccatgtaataacaaagagtccgaccaaccccccacccattattgatttgata
acgataaagctaagtgaaatgcgactatacaggactcaatatattaatgatgcataccag
gaagtactggatctactattgccattaaatcttgaggtgatggttgagcgaaatttatca
tgggagtggttccaggaagttccttgtttcaatgtaaatgctcagctaaagcccatggag
ttcattcttagtcaagaagatataacgaccatttttaaaacattatatggcaacatatgg
tatgaaggtgatagtgcttcacatgaagtaacaaaagatcagtccagcgttactagtggt
gctactactgcttcacaccatccagcaggaacaactgtagtgacagctgctgtggtagaa
gtacattcacatgcttctcaagttaagacaacactaaatatgagtttcagaaccgattat
ctcaccatggtactgtacagtccaggtcctaaacagacttcctttacagatattcgtgat
ccttccctgatacttgctgaatttaagttggagaatattataagcactttaaaaatgtgt
acagatgactcaacattttcttccttctcattaaaaaactgtattttagatgataaaagg
ccccatatcaagaaggcaactcctagaatgataggactgacagttgggtttgacaaaaag
gacatgatggatgtaaggtataggacaatccgagatggttgggtggctgatatagtcctt
caagaaatgtatatttgtgcaagtgtggaatttctgctgacagttgcaaatgtctttctt
gaggcctacactacaggcactgctatagaaaccaatgttcaaacatggtctgctaaagaa
gaagtacctaaacagcaatcagaaaagtgggaaatgaatatcactattaaaaatcctgaa
attgtgtttgtcgctgatatgacaagaaatgatgctcctgccttagtcattacaacacag
tgtgaaatatattggctaggtgactttgaaaatgatacaatgactgctgccattaaagat
ctccaagtgagagcatgcccatttcttccagtcaagagaaaaggaaaaatcactactgtt
ttgcaaccctgtgacttgttctgtcaagctactcagataagtacagatccacaagtactt
gaattatcagtaaaatccctgacactgaaggtttcaccagttatcataaatactgtgatt
accataacttcagcactttatactgccaaggaaaccatcccaaaagaaactgcttcttct
acagcacatttatgggaaaagaaggatacaaaagatttaaatatgtggtttcttgaagaa
ccaaatgaagctgtaaaaagagctcccatgcctgaattggtacccaaaggagagataata
aaaatgaacattgattctatttttctagttcttgaggctggaattggtcatagaacagta
cctatgctattggcaaaatcacgtttctcaggggaaggcaaaaactggagctccttaata
aatctccactgtcaacttgagctagaagtacattattacaatgaaatgtttggtgtgtgg
gagccattgcttgaacccttagaaattgatcagactgaggattttagaccatggaatctt
ggaatcaagatgaaaaagaaagccaaaaaggccattgttgagtcaggcactgaagaagaa
aattacagagtaccagaatataaaactgtcatcactttctattcaaaagaccagctaaac
attacattatctaaatgtggccttataatgttaaataatttagctgaggcatttacagaa
gctgccactggatcttcagctaccttcataagggatctggcaccttttatgattttaaat
tctcttggacttagtatttctgtttcaccaagtgaatcttttagtgtactcaacgtacct
atggcaaaatcatatgtattgaaaaatgaggagagtttaagtatggattatatgcgaact
aaagacaatgatcatttcaatgcaatgaccagcctaagcagcaaacacttcttcattctt
cttacacctgctaaccactctactgctgataaaatccctttaacaaaagtgggacgacga
ctgtacactgtaagacacagagagtctggagttgaaagatcaattgtttgtcaaattgat
gcagtggaaggaagtaagaaggtaacaattcgctctccagtgcagattagaaatcatttt
tcaataccactttctgtttatggaggagacacgttattgggaacggcttcacctggaagt
gaatttaacatacccttagcatcttaccgatcactactttctctgaagccagaagatgca
gactatcagatgtgtgaaggaattgactttgaagaaatgataaaacaagatggtacttct
ttcaagaagaaatgtagacctataaacccttccaggaagccatttatcattcatatagtc
ccagaaaaagataatttgacatatatgtcagtgtattcagaagaccattgggacttacca
tacataatacatttgtggccacctattctactccgaaatcttcttccttacaaaattgct
tattacatagaggggattgaacatagagtttttactctccatgaaggccattcagcacag
ctttgtactgtacagttggataaagccaggctacatttaaaattacttgactatcttaat
catgattggaaaagtgaatatcatataaaacctaatcaacaagatattagtttcatcagt
tttacttgtgttacagaaatagaaaagactgatttagatattgctgtccatgtgacttat
aatactgggcagactgttatggcatttcatagtccttattggatggttaataaaactggt
cgaatgttacagtataaagcagatggaattcatcgaaagcatccacctaattataaaaag
ccagttctcttttcatttcagccaaagcactttttcaataacaataaggttcagcttatg
gtaactgatagtgaattgtcagatcaattttcaattgatacagttggtagtcatggagct
gttaaatgtaaaggccccaaaatggaatatcaagttggtgtcactatagaccttagcagt
tttaacattaccagaattgtcacatttacccccttttttttgattaaaaacaaaagcaaa
tatcatatatcagtggctgaagagggaaatgataaatggctctctgttgatttggagcag
tgtgtccccttttggcctgaggatgcttctaataaacttcttattcaagttgaaagaagt
gaaagccctccccaaaagatacattttaataaggaagaaagttgtattttactgcatcta
gacaataaacttggaggtattatagcagaagttaatttggctgagcattctacagttatt
acattttcagattatcgtgatggagccgctacatttctgttaataaatcacaccaagaat
gacattgttcagtataagcaaagttccctcagtgaaatagaagattccctccctcctgga
aaagcagtattttatacatgggctgatccagtgggctctagaaagctgaagtgggaatgt
ggaaaaagccacggtgaagtaacacaaaaggatgatatgatgacacctataaatttggga
aaaaagaccatttatttagtttcattttttgaaggcttacaacgcataattttattcact
gaagatccaagagtatttaaagtgacatatgaaagtgagaaagcagagttagcagagcaa
gaaattgtgttggcattacaagatgttgggatttctcttgtcaacaattatacaaagcaa
gaagtagcctatattggcattacaagttctgatgtggtttgggagacaaagcccaagaag
aaggcaagatggaagccaatgagtgtaaagcacactgagaagttagagaaggaatttaag
gaatatgctgaatcttcaccgtcagaagataaggttattgagttggacactaacattctg
gtttgcttcacacctggtgctactaacatgaaaattctgcagccacatgtaatagctata
agaagaaattatcttccagcattaaaagtagaatatagcacatctgcacatcagtcatcg
tttagaattcaaatttatagaatacagatccaaaaccaaatacatggtgctatatttcca
tttgtgttttatcccattaaacctcccaagtccgtcaccttggattcagcaccaaaaccc
tttactgatgtcagtattgtcatgagatctgcaggacattcacagatatcacgtattaag
tatttcaaagtgttaatccaagaaatggatctcaggttagatcttggatttgtctatgct
gtatcagaacttatgacaccagctgaagtcactgaaaaaacagaggttgagctttttcat
aaagacatagaatctttccaagaagaatataaaatagtctcattagtagattcatcacaa
gtcagtctctatgaatactttcatatatctcctatcaagttgcatttaagtgtttcactg
agttcaggcggtgaagaagcgaaagattcagaacagcatgaaggactgatggcaattcat
tctttaaatcttttgctgaagagtattggtgccactctcacagatgtacaagatgtagtt
tttaagctagcattttttgaactcaattatcagttccatacaacagctgaactacagtct
gaagtaataagacactattcaaagcaggccattaaacagatgtatgtactcattcttgga
cttgatgttttgggaaatccctttggcttgataagagaattttctgaaggtgtagaagca
tttttttatgaaccttaccagggagccatccagggtcctgaagagtttgtggaaggaatg
gcactgggactgaaagcactagttggtggagctgttggtggactagctggtgctgcctcc
aaaatcaccagtgctatggctaaaggggtggcagccatgactatggatgaagactaccaa
cagaagagaagagaagccatgaacaagcaaccagctggtcttagagaaggcatcactcgt
ggaggaaaaggcttagtttctggttttgtaagtggcataacaggaattgttacaaaacca
atcaaaggagctcagaaagaaggagcaactggtttctttaaaggtgttgggaaaggttta
gttggagcagtgacaaggccaactggaggcatcatagacatggctagcagtacatttcag
ggaataaaaagagcgacagagacttcatcagaagtggagagtctgcgaccccctaggttc
tttaatgaagatggagttatcagaccttacaggttgagggatggtactggaaatcaaatg
ttacaggtcatcgaaaatggaagatttgcaaaatacaaatattttacccatgtcatgatc
aataagacagacatgttaatgattaccaaaagtggcgtattgtttgtaacaaaaggaaca
tttggacagcttacttgtgagtggcaatatagttttgatgagtttaccaaagagccattc
attgttcatgagagaagactgcgcatcgaagcaaaggaacgggtgaagtctgtattccat
gccaaagagtttggaaaaatagttaacttcagaaccccagaggatgcaaggtggatcctc
agaaagctagaagaagcaagagaaccttccccgaacctctga
DBGET
integrated database retrieval system
