Capricornis sumatraensis (Sumatran serow): 138081705
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Entry
138081705 CDS
T10522
Symbol
HTT
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum05016
Huntington disease
csum05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
138081705 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
138081705 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csum03019
]
138081705 (HTT)
04131 Membrane trafficking [BR:
csum04131
]
138081705 (HTT)
03029 Mitochondrial biogenesis [BR:
csum03029
]
138081705 (HTT)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
138081705 (HTT)
Membrane trafficking [BR:
csum04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
138081705 (HTT)
Mitochondrial biogenesis [BR:
csum03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
138081705 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_EF3_N
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
138081705
NCBI-ProteinID:
XP_068830877
LinkDB
All DBs
Position
7:complement(117761260..117885216)
Genome browser
AA seq
3129 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQQQQQQQQQPPPPPPQPPQPPPQAQPPPQPPPPPPPPPV
GPAAAEEPLHRPKKELSATKKDRVNHCLTICENIVAQSLRNSPEFQKLLGIAMELFLLCS
DDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWRFAELAHL
VRPQKCRPYLVNLLPCLTRTSKRPEESVQETLAAAIPKIMASFGNFANDNEIKVLLKAFI
ANLKSSSPTVRRTAAGSVVSICQHSRRTQYFYSWLLSVLLGLLVPVEEEHPTLLILGVLL
ALRSLVPLLQQQVKDTSLKGSFGVTRKETEVSPSTEQLVQVYELTLHYTQHQDHNVVTGA
LELLQQLLRTPPPELLRVLTMAGGVRQLAAAKDEPGGRSRSGSIVELIAGGGSSCSPVLS
RKQKGKVLFGEAAPLEDDSESRSEGSSPAFSASAKGEAGGELAASSGVSTPGSASSAADS
AGHDIITEQPRSQHTLQTDSVDLAACDLTSAATDGDEEDILSHSSSQMSAVPSDPAMDLN
DGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLDGADSQYPGVPAGQMQDEDEDAAATL
RDEDAEAFRSSSIALQQAHFLKSMSHSRQASDSSVDKFVSREEAAEPGDPESKPWRVKGD
IGQSTDEDSAPLVHCVRLLSASFLLTGEKNALVPDRDVRVSVKALALSCVGAAVALHPES
FFSKLYRAPLDTVEFPEEQYVSDVLNYIDHGDPQVRGATAILCGTLVCSVLGRCRFHVAG
WMGAVRARTGNTFSLVDCIPLLQKTLKDESSVTCKLACAAVRLCVMSLCSSSYSAWGLQL
ITDLLALRSSSYWLVRTELLETVAEIDFRLVSFLEAKAESLHRGAHHYTGRLKLQERVLS
NVVIHLLGDEDPRVRHVAAASLMRLVPKLFYKCDRGQADPVVAVARDQSSVYLALLMHEP
QPPSHLSVSAATRIYRGYNLLPSITDVTLENNLSRVIAAVSHELIMSTTRALTFGCCEAL
CLLSTAFPVCIWSLGWHCGVPPLSASDESRKSCTVGMVTVILTLLSSAWFPLDLSAHQDA
LILAGNLLAASAPRSLRSSWASEDEASAAASKQEEAWPALGDRTLVPMVEQLFSHLLKVI
NICAHVLDDVAPGPTVKAALPSLTNPPSLSPIRRKGKEKEPGEQASVPVSPKKGGESSPA
SRPPETSGPVATNKSSSLGSFCHLPSYLKLHDVLKATHANYKVTLDLQSSNEKFGGFLRS
ALDVLSQILELATLQDIGKCVEEILGYLKSCFSREPMMATVCVQQLLKTLFGTNLASQLD
GLSSHASKSQGRAQRLGSSSARPGLYHYCFMAPYTLFTQALADASLRNAAQAEQDQDTSG
WFDVLQKVSTQLKTNLTSVTKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQKQVL
ALLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERY
HSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGRELETQKE
VVVSMLLRLIQYHQVLEMFTLVLRQCHKESEDRWKRLSRQVADVILPMLAKQQVHIDSHE
ALGVLNTLFEILAPSSLRPVDMLLRSMFVTPDTLAVVSTVQLWVSGILAILRVLISQSTE
DIVLSRIQELSFSPNLVSCSTISRLRDGDSASAPEELSEGRQTKNLPEETFARFLLQLAG
ILLEDIVTKQLRVEVSEQQHTFYCQELGTLLMCLVHIFKSGTFRRITAAASRLLRDGADG
GFYSLESLNARVRSMVPTHPALVLLWCQILLLVGHTDYRWWAEVQQTPKRRSLSSTKSLS
PEMSGEDEDPDVASKLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHIQDLISL
SHEPPVQDFISAVHRNSAASGLFIQAIQSRCGNLSTPTMLKRTLQCLEGIHLSQSGAVLT
LYVDKLLCTPLRALARVVETLACRRVEMLLAANLQSSTAQLPAEELIRIQEHLQSSGSAQ
RHQRLFSLLDRLRLATAPGSHGPTPPVTSHPLDGDGPLALEAVNPDKDWYVQLVKAQCWT
RSDSALLEGAELVSRIPAGDLGAFVMHSEFNLSLLAPCLGLGMREISGGQRSPLFEAARM
ATLDRVTVVVQQLPTVHQAFQPFLPPQPATYWSKLDDLFGDAALYRTLTTLAQALAQYLL
VFSKLPSHLQLPPEKERDTVKFVVMTLEALSWHLTHARVPLSLDLQAGLDCCCLALQLPG
LWSLLAAPNMVTHACSLIHCVRFILEAIVVQPGDQLLSPERRTSVPRSAREDSVGSDTQT
PQYIAAACGMVAEMVECLPSVLALGHKRNSHTPAFLTPVLRNIIISLARLPLVNSYTRVP
PLVWKLGWSPKPGGDFGTVFPEIPVEFLQEKEVFKEFIYRINTLGWTSRTQFEETWATLL
GVLVTQPLVMEQEESPPEEDMERTQIHVLAVQAITSLVLSAMTVPVAGNPAVSCLEQQPR
NKPLKALDTRFGRKLSVIRGIVEQEIQAMVSRRENAATHHLYQAWDPVPSLAPATTGALI
SHDKLLLQLNPERELGDMSYKLGQVSIHSVWLGNSITPLREEEWDEEEEEAEAPAPSSPP
TSPLNSRKHRAGVDIHSCSQFLLELYSRWILPSSSARRTPVTLISEVVRSLLVVSDLFTE
RNQFEMMYLTLTELRKAHPSEDEILLQYLVPATCKAAAVLGMDKAVAEPVSRLLESTLRS
SHLPSTMGALHGVLYVLECDLLDDTAKQLIPVVSDYLLSSLQGRAHCVNVHSQQHVLVMC
ATAFYLIENYPLDVGPEFSASIIQMCGVMLSGSEEATPSVVYHCVLRGLERLLLSEQLSR
LDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKVSPGRASEPSPAAPDSESVIV
AMERVSVLFDRIRKGFPCEARVVARVLPQFLDDFFPPQDVMNKVIGEFLSSQQPYPQLMA
TVVYQVFQTLHSAGQSSTVRDWVMLSLSNFTQRSPVAMAMWSLSCFFVSASTSPWVSAIL
PHVVSRMGKLEQVDVNLFCLVAADFYRHQIEEELDRRAFQSVFEVVAVPGNPYHHLLACL
RSVHKAATC
NT seq
9390 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctggaaaagctgatgaaggccttcgagtccctcaaatccttccagcagcag
cagcagcagcagcagcagcagcagcagcagccgcctccgccgccgcctcagcctcctcag
ccgccgccgcaggcgcagccgccgcctcagccgcccccgccgccgccgccgccgccggtt
ggccctgccgcggccgaggagccgctgcatcgaccaaagaaagagctctcagccaccaag
aaagaccgcgtgaaccactgtctgacaatctgtgaaaacatcgtcgctcagtctctcaga
aattctccagaatttcagaaacttctgggcatcgctatggaactttttctgctgtgcagt
gatgatgcggagtcagatgtcaggatggtggctgacgaatgcctcaacaaagtcataaaa
gctttgatggattctaatcttccgaggttgcagctagaactctataaggaaattaaaaag
aacggcgccccgcggagcctgcgcgctgccctctggaggttcgccgagctggctcacctg
gtccggcctcagaaatgcaggccgtacctggtgaacctgttgccctgcctgacgcgcaca
agcaagagacccgaggagtccgtccaggagacgctggccgcagcgatccctaaaattatg
gcttcttttggcaactttgcgaacgacaatgagattaaggtgctgttgaaggctttcatt
gcgaacctgaagtccagctccccgaccgtgcggcggaccgcggcgggctcagtggtcagc
atctgccagcactccaggaggacacagtacttttacagctggctgctcagcgtgctccta
ggtttgctggtccccgtggaggaggagcaccccaccctgctgatccttggcgtcctgctt
gcgctgaggtccttggtgccgctgctgcagcagcaggtcaaggacacgagcctgaaaggc
agcttcggtgtgacgcggaaagagacggaggtctccccctcgacggagcagctcgtccag
gtgtacgagctgaccttgcactacacccaacatcaggaccacaacgtcgtgaccggggcc
ctggagctgctgcagcagctcctccgaaccccgccgcccgagctcctgcgcgtgctgacc
atggcgggcggcgtccggcagctcgcggccgccaaggacgagcccgggggccgcagtcgg
agcgggagcatcgtcgagctgatagctggagggggttcttcatgcagccctgtcctttca
agaaaacaaaaagggaaagtgctcttcggagaagcggcacccttggaagatgactcggag
tccaggtcggagggcagcagccccgccttctcagcctcagccaagggtgaggccggaggt
gagctggctgcctcttccggggtctccacccctggctccgccagctcagcggccgactct
gcgggtcatgacatcatcaccgagcagccccggtcgcagcacacacttcagacggactcg
gtggatctggccgcctgtgacttgacgagcgccgccaccgacggggacgaggaggacatc
ctgagccacagctccagccagatgagcgccgtcccttccgaccccgccatggacctgaac
gacgggacccaggcctcctcgcccatcagcgacagctcccagaccaccaccgaggggccc
gattcagccgtgaccccttccgacagttctgaaattgtgttagatggcgctgacagccag
tacccaggggtgccggcggggcagatgcaggacgaggacgaggacgctgccgccactctt
cgtgacgaagacgcagaggctttcagaagctcttccatcgcccttcaacaagcacatttc
ttgaaaagcatgagccacagcaggcaggcctctgacagcagtgtggataaatttgtctca
agagaggaagctgccgaaccaggggatccagagagcaagccctggcgggtcaaaggcgac
attggccagtccactgacgaggattccgcccctcttgtccattgcgtccgccttttgtca
gcttcgtttctgctcacaggggaaaagaatgccttggttccggacagggacgtgcgggtc
agcgtgaaggcgctggccctcagctgcgttggagccgccgtggcccttcatcctgagtct
ttcttcagcaaactctacagagcgcctcttgacaccgtggaattccctgaggagcagtac
gtgtcagacgtcttgaactacatcgaccacggggacccgcaggtccggggagccacagcc
atcctgtgcgggaccctcgtctgctccgtccttggccggtgccgcttccatgtggcgggc
tggatgggtgccgtcagagcccggacaggaaatacattttctctggtggactgcattccc
ctgctgcagaaaactttgaaggacgaatcctcggttacttgcaagttggcttgtgctgct
gtgaggctctgtgtcatgagcctctgcagcagcagctacagtgcgtgggggctgcagctc
atcaccgacctgctggccctgcggagcagctcctactggctggtgcggacggagcttctg
gagacggtggcagagatcgacttcaggttggtgagctttctggaggccaaagcagaaagt
ctgcacagaggggcccatcactatacagggcgtttaaaactgcaagagcgggtactcagt
aatgttgtcatccatctgcttggagatgaagaccccagggtgcgacatgtggctgcagct
tcgttgatgaggctcgtcccaaagctgttttacaagtgcgaccgaggacaggcggacccg
gtggtggccgtggcgcgagaccagagcagcgtgtacctggcgctcctcatgcatgagccg
cagcctccgtcccacctctccgtcagcgccgcaaccagaatttatagaggctataacctg
ttaccaagcatcacagatgtcactctggaaaataacctctcgagagtcattgcagcagtt
tctcatgaactgatcatgtcgaccacgagggcactcacatttggatgctgcgaagctctg
tgtctgctgtcaactgccttcccagtttgcatctggagtttaggttggcactgtggagtg
cccccgctgagcgcctcagatgagtccaggaagagctgcaccgtggggatggtcacggtg
atcctgacgctgctctcgtcagcctggttcccgctggatctctctgcccaccaggatgct
ctgattttagcggggaacttgctggcagccagtgcccccaggtctctgaggagctcgtgg
gcctctgaagacgaggccagtgcggcagccagcaaacaggaggaggcgtggccggccctg
ggtgaccggaccctggtgcccatggtggagcagctcttctcccacctgctgaaggtcatc
aatatctgtgcgcacgtcctggacgatgtggctccgggacccacagtgaaggcagccctg
ccttctctcacaaacccgccttctctgagcccaatccgaaggaaggggaaagagaaggag
ccgggagagcaggcgtctgtgcccgtgagtcccaagaaaggcggcgagtccagtccagcc
tctcgaccacctgaaacctcagggcctgttgccacaaacaagtcctcgtcactggggagc
ttctgtcacctgccttcttacctcaaactgcacgacgtcctgaaagccactcacgccaac
tacaaggtcaccttggatcttcagagcagcaacgagaagtttgggggtttcctgcgctct
gccttggacgttctgtctcagattctggagctggcgacgctgcaggacattgggaagtgt
gttgaagagatcctgggatacctgaagtcttgcttcagtcgagagccgatgatggcgacc
gtgtgtgttcagcagttgctgaagactctgttcgggacaaacctggcctcccagttggat
ggcctgtcttcgcacgccagcaagtcgcagggccgtgcgcagcgcctcggctcctccagc
gcacggcccggcttgtaccactactgcttcatggcaccgtacaccctcttcacccaggcc
ttagcggacgccagcctgcggaacgcggcccaggcagagcaggaccaggacacctcaggg
tggtttgacgtcctccagaaagtgtcaacccagctgaagacaaacctcaccagcgtcaca
aagaaccgagcagacaagaatgctattcacaatcacattcgcttgttcgagcctctcgtc
ataaaagcactgaagcagtacacgaccacaacctccgtacagctgcagaagcaggtgctg
gccttgctggcgcagctagtccagctgcgggtcaactactgcctgctggactcagaccag
gtgttcattggatttgtgctgaagcagtttgaatacattgaagtcggccagttcagggag
tcagaggcgattatcccaaacatctttttcttcctggtattactgtcttacgagcgttac
cactcaaaacagatcatcgggatccctaaaatcatccagctctgtgacggcatcatggcc
agcgggaggaaggcggtgacgcacgccatacctgccctgcagcccatagtccatgacctc
ttcgttttaagaggaaccaataaggctgatgcaggaagagagcttgagacccagaaggag
gtggtggtgtccatgctgctgagactcatccagtaccatcaggtgctggagatgttcacg
ctggtcctgcggcagtgccacaaggagagcgaggacaggtggaagcggctgtcccggcag
gtggctgacgtcatcctcccgatgctggccaagcagcaggtgcacattgattctcatgag
gccctgggagtgctgaacacgttgtttgagattttggccccttcctccctgcgccccgtg
gacatgcttttacggagtatgttcgtcaccccagacaccctggcggtggtgagcacagtc
caactgtgggtatcaggcatcctggccatcctgcgggtgctgatttcccagtcgaccgag
gacatcgtcctgtcccgcatccaggagctctccttctctccgaacttggtctcctgttcg
acaatcagtaggttgagagatggggacagtgcttcagccccggaggagctcagtgaaggg
agacagacgaagaatctgccagaagaaacatttgccaggtttctgctccagctggctggc
atccttttagaggacatcgtcaccaagcagctgcgggtggaggtgagcgagcagcagcac
accttctactgccaggagctgggcacgctgctcatgtgtctggtccacatcttcaagtcg
gggacgttccggaggatcactgccgctgcctcgaggctcctgagggacggtgcggacggc
ggcttctacagcctggagagcctgaacgcgcgggtgcgctccatggtccccacgcacccg
gccctggtgctgctgtggtgtcagatcctgctgctcgtcggccacaccgactaccgctgg
tgggcggaggtgcagcagacccccaaaagacgcagcctgtccagcacgaagtccctgagt
ccggagatgtctggagaggacgaggatcccgacgtggcttccaagctggggatgtgcaat
agagagatcgtgcggagaggcgccctcattctcttctgcgactacgtctgccagaacctg
catgattcggagcacctgacgtggctcatcgtgaaccacattcaagacctgatcagcctg
tcccacgagccccccgtgcaggacttcatcagcgccgtccatcggaactccgccgccagt
ggccttttcatccaggcgattcagtctcgctgtgggaacctctccactcccaccatgctg
aagagaactctccagtgcctggaagggatccacctgagccagtcgggcgccgtactgacg
ctgtacgtggacaagcttttgtgcacgccgctccgtgcactggctcgcgtggtcgaaacc
cttgcttgtcgccgggtggaaatgcttttggccgcaaatttacagagcagcacggcccag
ctgccggcggaggagctgatccgcatccaggagcacctgcagagcagcgggtcagcacag
agacaccagaggctcttctccctgctggacaggcttcgtctcgccactgcaccggggtca
catggccccacgccccccgtcacgtcccaccccctggacggggatgggcccctggcactg
gaggcagtgaatcctgacaaagactggtacgtgcagctggtgaaggcccagtgctggact
cggtcagactctgccctgctggaaggcgcagagctggtgagccggatccccgcgggcgac
ctgggcgccttcgtgatgcactcggagttcaacctgagcctgttggcgccgtgcctgggc
ctgggcatgcgtgagatctcagggggccagcggagccccctttttgaagcagctcgcatg
gcgactctggaccgcgtgaccgttgtggtccagcagcttcccaccgtccaccaagctttc
cagccgttcctgcccccacaacccgccacctactggagcaagctggatgacctctttggg
gatgctgcgctgtatcggactctgaccaccctggcccaggccctggcccagtacctgctg
gtgttctccaagctgcccagccatttgcaacttcctcctgagaaggaaagggacaccgtg
aagttcgtggtcatgaccctcgaggcgctgtcgtggcacctgacccacgcacgggtcccg
ctgagcctggacctgcaggcgggcctggactgctgctgcctggccctgcagctgcccggc
ctctggagcctgctggccgcgcccaacatggtgacccacgcctgctccctcatccactgt
gtgcggttcatcctggaagccattgtggtgcagcccggggaccagcttcttagtccagaa
agaaggacgagtgtccccaggtctgccagagaggacagcgtgggctcagacacacagacc
cctcagtacatcgctgcagcctgtggcatggtggccgagatggtggagtgcctgccgtcg
gtgctggccttgggccataagaggaacagccacacgcccgcgttcctcacaccggtgctc
aggaacatcatcatcagcttggcccgcctgcccctcgtcaacagctacacgcgtgtcccg
cccctggtatggaaactcggatggtcacccaaaccgggcggggatttcggcacagtgttc
cctgagatccctgtggagttcctccaggagaaggaggtctttaaagagttcatctaccgc
atcaacacgctggggtggaccagccgcacccagtttgaggagacatgggccaccctcctc
ggcgtcctggtgactcagccactcgtgatggagcaggaggagagccccccggaagaggac
atggagaggacacagatccatgtcctggccgtgcaggccatcacctccttggtgctgagc
gcgatgaccgtgcccgtggccggcaacccggccgtgagctgcctggagcagcagccccgg
aacaagcccctgaaggccctcgacaccaggtttggaaggaagctgagtgtcatcagaggg
attgtcgagcaggagatccaagcaatggtttccaggagagaaaacgccgccactcaccac
ctataccaggcgtgggaccccgtcccgtctctagccccagccaccacaggtgctctcatc
agccatgacaagctgctgctgcagctcaaccctgagcgtgagctgggggacatgagctac
aagcttggccaggtgtccatccactcggtgtggctggggaacagcatcacgcccttgcga
gaggaggagtgggacgaggaggaggaggaggccgaggccccggcaccgtcgtccccgccc
acgtctccgctcaactccaggaaacaccgggctggagtcgacatccactcgtgttcgcag
tttttgctcgagttgtacagtcgctggatcctgccatcgagttccgccaggaggaccccc
gtcaccctgatcagcgaggtggtgcgctcgctcctcgtggtctcggacttgttcacggag
cgcaaccagtttgagatgatgtacctgacgctgacggagctgcggaaggcacacccctca
gaagacgagatcctcctccagtacctggtgcccgccacctgcaaggcggctgccgtcctc
gggatggacaaggccgtggcggaaccggtcagccggctgctggagagcacgctccggagc
agccacctgcccagcacgatgggcgccctgcacggcgtcctgtatgtgctggagtgcgac
ctcctggacgacaccgccaagcagctcatccccgtcgtcagcgactacctcctctccagc
ctccagggcagagcccactgcgtgaacgtgcatagccagcagcacgtcctggtgatgtgt
gccacggccttctacctgatcgagaactacccgctggacgtggggccggagttctcggct
tccatcatacagatgtgtggagtgatgctgtctggaagcgaggaggccaccccgtccgtc
gtctaccactgtgtcctgcggggcttggagcgcctcctgctctctgagcagctctcccgg
ctggacgcagagtccctggtcaagctgagcgtggaccgggtgaacgtgcacagcccacac
cgcgccatggctgccctgggcctcatgctcacctgcatgtacacaggaaaggagaaagtc
agtccaggccgagcctccgagcccagccccgctgcccctgacagcgagtccgtgatcgtg
gccatggaacgcgtgtccgtcctctttgacaggatccggaaggggttcccctgcgaagcc
cgcgtggtggcgcgcgtcctcccccagttcctggacgacttcttcccgccccaggacgtc
atgaacaaggtcatcggcgagttcctgtccagccagcagccgtacccgcagctcatggcc
actgtcgtgtaccaggtgttccagacgctgcacagcgcggggcagtcgtccacagtgcgg
gactgggtcatgttgtcgctctccaacttcacgcagcggagcccggtcgctatggccatg
tggagtctctcctgcttcttcgtcagcgcgtccaccagcccatgggtctcggcgatcctc
ccacacgtcgtgagcaggatgggcaagctggagcaggtggacgtgaacctcttctgcctg
gtggccgcggacttctaccgacaccagatagaggaggagctcgaccgcagggccttccag
tctgtgttcgaggtggtcgccgtgcccggaaacccataccaccacctgctggcttgtctg
cggagcgtccacaaggccgccacatgctga
DBGET
integrated database retrieval system
