Capricornis sumatraensis (Sumatran serow): 138081762
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Entry
138081762 CDS
T10522
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138081762 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csum03019
]
138081762 (FIP1L1)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
138081762 (FIP1L1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
138081762
NCBI-ProteinID:
XP_068830966
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Position
7:71806394..71884697
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AA seq
568 aa
AA seq
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MSAGEVERLVSELSGGTGGDEEEEWLYGGPWDVHVHTDLAKDLDENEVERPEEENASANP
PSGIEDETPENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNL
NIKTGGRVYGTTVGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYG
FNEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQG
RTGNAEKETALPSAKAEFTSPPSLFKTGLPPSRRLPGAIDVIGQTITISRVEGRRRANEN
SNIQVLSERSATEVDNNFSKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPI
TVPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRSARAFPYGNVAFPHLPGSTPSWPSLVD
TSKQWDYYSRREKDRDRERDRDRERDRDRDRERERTRERERERDHSPTPSVFNSDEERYR
YREYAERGYERHRASREKEERHRERRHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHK
KSKRSKEGKEAGSEPAPEQESTEATPAE
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcgggaccggaggggat
gaggaggaagagtggctctatggcggcccatgggacgtgcatgtgcacactgatttggca
aaggacctagatgaaaatgaagttgaaaggccagaagaagaaaatgccagtgccaatcct
ccatctggaattgaagacgaaactcctgaaaatggcgtacctaaaccgaaagtgactgag
actgaagatgatagtgatagcgacagtgatgatgatgaggacgatgttcacgtcactata
ggagacattaaaacgggagcaccacagtatgggagttacggtacagcacctgtaaatctt
aacatcaagacaggaggaagagtttatggaactaccgtaggaacgaaagtgaaaggagtg
gatctggatgcgcctggaagcattaatggagttccgctcttggaggtggatttggattct
tttgaagataaaccatggcgtaaacctggtgctgatctttctgattattttaattacggg
tttaatgaagatacctggaaggcttactgtgaaaaacagaagaggatacgaatggggctt
gaagttataccagttacctctactacaaataaaattacggccgaagactgtactatggaa
gttacaccaggtgcagagatccaagatggcagattcaatctttttaaggtgcagcaggga
agaactggaaacgcagagaaggaaacagcacttccatctgcaaaagcggagtttacttcc
cctccttctttgttcaagactggacttccaccaagcaggagattacctggggcaattgat
gttattggtcagactataactatcagccgagtagaaggaaggcgacgggcaaatgaaaac
agcaatatacaggtcctttctgaaagatctgccactgaagtagacaacaattttagcaaa
ccacctccatttttccctccaggagctcctccaactcaccttccacctcctccatttctt
ccacctcctccgactgtcagcactgctccacctctgattccaccaccaggtattccaata
actgtaccacctccaggttttcctcctccaccaggtgctccacctccatcccttatacca
acaatagaaagtggacattcctctgggtatgatagtcgttctgcacgtgcttttccatat
ggcaatgttgcctttccccaccttcctggttctactccttcatggcctagtcttgtggac
accagcaagcaatgggactattactcaaggagagagaaagaccgagacagagagagagac
cgagaccgagagcgagaccgtgatcgagacagagaacgagaacgcaccagagagagggag
agggagcgtgatcacagtcccacgccgagcgtcttcaacagtgatgaagaacgatacaga
tacagggagtatgcagaaagaggctatgagcgccacagagcaagtcgggagaaagaagaa
cgacacagagaaagacgacacagagagaaagaggaaaccagacacaagtcctctcgaagc
aatagtagacgtcgccatgaaagtgaagaaggagacagtcataggagacacaagcacaaa
aaatctaaaagaagcaaagaaggaaaagaagctggcagtgagcctgcccctgaacaggag
agcactgaagctacacctgcagaatag
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