Capricornis sumatraensis (Sumatran serow): 138081764
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Entry
138081764 CDS
T10522
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03030
DNA replication
csum03410
Base excision repair
csum03420
Nucleotide excision repair
csum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138081764 (RFC1)
03410 Base excision repair
138081764 (RFC1)
03420 Nucleotide excision repair
138081764 (RFC1)
03430 Mismatch repair
138081764 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csum03032
]
138081764 (RFC1)
03400 DNA repair and recombination proteins [BR:
csum03400
]
138081764 (RFC1)
DNA replication proteins [BR:
csum03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
138081764 (RFC1)
DNA repair and recombination proteins [BR:
csum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
138081764 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
BRCT_2
AAA_22
AAA_14
RuvB_N
AAA_5
Rad17
AAA_30
AAA_7
AAA_18
AAA_16
AAA_17
nSTAND3
AAA_33
RNA_helicase
NTPase_1
AAA_19
Nexin_C
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
138081764
NCBI-ProteinID:
XP_068830993
LinkDB
All DBs
Position
7:complement(60868233..60940840)
Genome browser
AA seq
1147 aa
AA seq
DB search
MDIRKFFGVIPSGKKLVSETVKKNEKTKSAEESLKAKKGIKEIKVNNSCTEDEIKPKQSN
KKKRIIYDSDSESEETVQVKNAKKRPEKLPLSSKPAKIQQQDPVTYISETDEDDDFVCKK
TASKSKENGGSTNSYLGASNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSIQRSDKK
MVASRRKEPSQNADDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
AEKAAEERETFSSVQVNLHKAEKPKYPHKGKTKQFSDERKNFSPKKQTKFEGSRESQQRS
RSSAHKTGETSPKASSKLALLKKKEESSNKETESMASKRKENVIELKETRTPKKIKSSPA
KKESISPDDAEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIE
RDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTNIIDEDGLLNLIRTM
PGKKSKYEIAAEAEMKKEKSKLERTPQKNDRGKRKSSPTKKESESKKCKLTPKRESSIKS
LKKEASVSQRGLDFKEQAAEEANGDSRARNLADDSRESKVESLLWVDKYKPTSLKTIIGQ
QGDQSCANKLLRWLQNWHKGPSEDKKHAAKFGKFAGKDDGSSFKAALLSGPPGVGKTTTA
SLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSIKGFYSSGTVRTVGTRHALIMDE
VDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIK
GAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLNMWCARNKALTYDQAKADSHRAK
KDIKLGPFDVARKVFVTGEETAHMSLMDKSDLFFHDYSIAPLFVQENYIHVKPIAAGGDM
KKHLMLLSRAADSICDGDLVDRQIRNKQNWSLLPTQAIYASVLPGELMRGYMTQFPTFPS
WLGKYSSMGKHDRTVQDLALHMSLRTYSSKRTVNMDYLSHLRDALVQPLASQGIEGVQDV
VALMDAYYLMKDDFENIMEISNWGGRPSPFSKLDPKVKAAFTRAYNKEVHLTPYSLQAVK
THRHSTGPSLDSEYSEELNEDDSQSDEKDQDTLETDAMIKKKTKSSKPSKSEKDKESRKG
KGKSSKK
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggggttataccaagtggaaagaaacttgtaagtgagaca
gtaaagaagaatgagaaaacaaagtctgctgaagaaagtttaaaagcaaagaaaggaata
aaggaaatcaaggtaaataattcttgtacagaagatgaaatcaagccgaagcagtcaaac
aagaaaaagaggatcatctatgattcggattcagaatcagaggaaacagtacaggtaaaa
aatgccaaaaagcgaccagaaaaattgccactgtcttctaaacctgctaaaatccaacag
caggatcctgttacctacatttcagaaacagatgaagatgatgactttgtgtgtaagaag
acagcctctaaatcaaaagaaaatggaggatctacaaatagttatcttggagcatcaaac
atgaaaaagaatgaggaaaacactaagaccaagaataagcctttgtcaccaataaaactt
acccccacatcagtgcttgattattttggaactggaagcatccaaagatcagataagaag
atggtggcaagcagaagaaaagagccttcacaaaatgcagatgattccagattaaatgat
gaagccatcgccaagcaattacaacttgatgaagatgcagagctggagagacaactgcat
gaagatgaagagtttgctagaacgttagccatgttggatgaagaacccaagaccaaaaag
gctgaaaaggctgcagaagaaagagagacgttttcatctgtgcaagtcaatttacataaa
gcagagaaacctaaatatcctcataaaggtaaaactaaacaattttcagatgaaagaaag
aacttcagccctaagaagcaaactaagtttgaaggttcaagagaatcccagcaacgttcc
aggtcatcagctcataaaacaggagaaacttctccaaaagccagttctaagctggcactt
ttgaaaaaaaaagaagagagttctaataaagaaacagagtctatggcctcaaaaagaaaa
gaaaatgttattgagttaaaagagacaagaactcctaagaaaatcaaaagttctccagct
aaaaaagagtctataagtcctgatgatgctgaaaagagacgcactaattatcaagcttac
cgaagctacttaaatcgagaaggtcccaaagctctgggctccaaagaaataccaaaggga
gctgaaaattgcttggaaggccttacgtttgtaatcacaggagtgctggagtccattgaa
cgagatgaggccaagtctctaattgagcgttatgggggaaaagtgacgggaaatgtcagc
aagaaaacaaactacctggtcatgggtcgtgatagtggccaatccaagagtgacaaggca
gcagccttgggaacaaatattattgatgaagatggcctgttgaatctgattcgaaccatg
ccaggcaagaagtccaagtatgaaatagctgctgaagctgagatgaagaaagaaaaatcc
aaattggaaagaacaccccaaaaaaatgaccgaggaaaaagaaaaagtagtccaactaag
aaggaatcagaatctaaaaagtgcaaactgactcccaaaagggaaagctctataaagtca
ctaaaaaaggaagcaagtgtgtctcagagaggcctggacttcaaggagcaggcggctgag
gaggcaaatggtgacagccgggctaggaatttggctgatgacagcagagaaagcaaagtg
gaaagtttgctctgggtggataagtataagccaacctcgctcaagaccataattggacag
caaggtgaccagagctgtgccaacaaactcctgcgctggctccaaaactggcataagggt
ccatccgaagataagaaacacgcagcaaagtttggtaaatttgctggcaaagatgatggg
tccagttttaaagcggcattgctctcaggtcctcctggtgttggcaaaacaaccacagct
tctctggtttgtcaggaattggggtatagctatgtggaactgaatgcaagtgacacccgg
agtaagaacagtttgaaggagattgttgctgagtcactgaataataccagcatcaaaggc
ttttattcaagtggaacagtccgtacagtaggcacgaggcatgctctcatcatggatgaa
gtagatggcatggctggcaatgaggacaggggaggaattcaggaattaattggcctgata
aaacatacaaaaattcccattatttgtatgtgcaatgatagaaaccatcccaagattcgc
tctttggttcattattgttttgatcttcgttttcaaagacctcgggttgaacagattaag
ggtgctatgatgtctattgcatttaaagagggtctaaagatcccccctccagctatgaat
gaaataattttgggagctaatcaagatatcagacaggttttacacaatctgaatatgtgg
tgtgcacgaaataaggcactaacctatgaccaggccaaggctgattctcatagagccaaa
aaggatatcaaactgggcccgtttgatgttgcccggaaagtgtttgtaactggagaagag
actgctcatatgtcacttatggacaaatcagatctcttcttccatgattattcaatagca
cccctctttgtccaggagaactacatacatgtgaagcccatagctgcagggggtgacatg
aaaaagcacttgatgcttttaagcagagcagcagacagcatatgtgatggtgacctagtg
gaccgtcaaatccgaaataagcaaaactggagtcttctgcccacacaggccatttatgcc
agtgttcttcctggagagttaatgagggggtacatgacccagtttcccaccttcccaagt
tggttggggaaatactcatctatgggcaaacacgatcgtactgttcaggacctggctctg
catatgagtctcagaacttactccagcaaaaggacagtaaacatggattatctgtcacat
ctaagggatgcacttgtacagcccttggcctcacaagggatagaaggagtacaggatgtt
gttgctctcatggatgcatattatttgatgaaagatgacttcgagaatattatggaaatt
agcaactggggaggcagacctagtccgttttctaaactggatcccaaggtgaaagcagcc
ttcacaagagcttacaataaagaagtccaccttactccgtattcactccaggcagtaaag
acacacagacatagcacaggcccatcactggattctgaatacagtgaagagttaaatgaa
gatgactctcaatctgatgagaaagaccaggacactttggaaactgatgctatgatcaag
aaaaagacaaaatcttcaaagccttcaaaatcagaaaaagataaggagtccagaaaagga
aaaggaaaaagttcaaagaaatga
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integrated database retrieval system
