Capricornis sumatraensis (Sumatran serow): 138081921
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Entry
138081921 CDS
T10522
Symbol
CNOT6L
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138081921 (CNOT6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csum03019
]
138081921 (CNOT6L)
Enzymes [BR:
csum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
138081921 (CNOT6L)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138081921 (CNOT6L)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
138081921 (CNOT6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
138081921
NCBI-ProteinID:
XP_068831154
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All DBs
Position
7:complement(94862887..94924902)
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AA seq
564 aa
AA seq
DB search
MPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTALHLND
NYLSRIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYELGRLF
QLQTLGLKGNPLSQDILNLYQDPDGTRKLLNFMLDNLAVHPEQLPPRPWITLKERDQILP
SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQFSSIMS
VIMYLPSQEVETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEK
FTLVQKHTVEFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADK
QLLIVANAHMHWDPEYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADL
NSLPDSGVVEYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYE
NNLMPYTNYTFDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFS
LLTQLELHPPLLPLVNGVHLPNRR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgatcctccagatcctcgcagaatttataccatcatgtcagca
gaggaggtagccaatgggaaaaaatctcactgggcagaattagaaatctcgggtagagtg
cggagcttaagtacatcactttggtcattgacacacttgacagcgctgcacctaaatgac
aattaccttagtcgcattccacctgatattgccaagcttcataatctggtttacctggat
ctgtcatccaataaactcagaagtttaccagcagaactaggaaacatggtgtctctcagg
gaattgcttttaaataacaatctgttacgggttttgccttatgaacttggtcggctcttc
cagctacaaactctaggtttgaaaggcaatcctttatcacaggatattctcaatttatac
caggacccagatggaacccgaaagctactgaacttcatgcttgacaatcttgcagttcat
ccagagcagcttcctccgaggccatggattacattaaaagaacgagaccaaattctgcca
tcagcatcattcacggttatgtgttacaatgtgttatgtgataaatatgccacccggcag
ctatatggctattgcccatcctgggcattaaactgggaatacaggaaaaagggaattatg
gaagaaattgttaactgtgacgcagatatcattagtcttcagttttcctctatcatgtcg
gtgataatgtatcttccatctcaggaagtggaaacagagcaatacttcactctctttctg
ccagcattgaaggagcgtggatatgatggatttttttctccaaagtcacgtgccaaaatc
atgtctgagcaggagagaaagcatgtggatggttgtgcaatattcttcaaaacagaaaaa
tttacattggtgcagaagcatacagtggaatttaaccaagtggcaatggctaattcagat
ggatccgaagctatgctgaacagagtgatgacaaaagataatatcggtgttgctgtggta
ttagaggtccacaaagaactatttggagcaggtatgaagcctattcatgctgcagacaaa
cagctgcttatagtggcaaatgcccacatgcattgggacccagagtattctgatgtgaaa
ctcattcagaccatgatgtttgtctcagaggttaaaaacattctggagaaagcctcaagc
aggcctggcagcccaaccgcagatcctaattccatcccgctggtgctatgtgcagatctt
aactcattgccagattcaggtgttgtggaatatttaagcaatggaggagtagctgacaac
cacaaagacttcaaggaactaaggtacaatgaatgtcttatgaacttcagctgcaatggg
aagaatggaagctcagaagggagaatcacacatggcttccaactgaagagcgcctatgaa
aataacttgatgccttacaccaattacacctttgatttcaaaggcgtgattgactacatt
ttctattccaagactcatatgaacgtgcttggtgtcctggggcctttagatcctcaatgg
ctggttgagaacaacatcactgggtgtccacaccctcacatcccttcagaccacttctca
ctgttaacacaacttgaactccaccctccactcctgcctcttgtcaatggtgttcacttg
cctaaccggaggtag
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