Capricornis sumatraensis (Sumatran serow): 138082973
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Entry
138082973 CDS
T10522
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03008
Ribosome biogenesis in eukaryotes
csum03013
Nucleocytoplasmic transport
csum03015
mRNA surveillance pathway
csum05014
Amyotrophic lateral sclerosis
csum05164
Influenza A
csum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138082973 (NXF1)
03015 mRNA surveillance pathway
138082973 (NXF1)
03008 Ribosome biogenesis in eukaryotes
138082973 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
138082973 (NXF1)
05168 Herpes simplex virus 1 infection
138082973 (NXF1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
138082973 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csum03019
]
138082973 (NXF1)
03009 Ribosome biogenesis [BR:
csum03009
]
138082973 (NXF1)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138082973 (NXF1)
mRNA cycle factors
Stress granule specific factors
138082973 (NXF1)
Ribosome biogenesis [BR:
csum03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
138082973 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
UBA_8
LRR_4
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
138082973
NCBI-ProteinID:
XP_068832598
LinkDB
All DBs
Position
8:9884715..9896219
Genome browser
AA seq
620 aa
AA seq
DB search
MADEGKSYNEHDDRVSFPQRRKKGRGPFRWKSGEGNRRSGRGGSSVRSSRLEDDDRDVAM
SDVQDAPRVRYTPYAARPNRRGDNWNERTRIHVTLPLRRDRGAAERGGAGTSQDGSSKNW
FKITIPYGRKYDKSWLLNVIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKI
LDRENRRISIIINSSSPPHSVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLV
AQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNKLYRLDDLSSIVQKAPNLKILNLS
GNELKSERELDKIKGLKLEELWLDGNTLCDTFRDQSTYISAVRERFPKLLRLDGHELPPP
IAFDVEAPTTLPPCKGSYFGTETLKNLVLHFLQQYYAVYDSGDRQRLLDAYHDGACCSLS
IPFTPQNPARSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDINSF
VIDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASNSGLCIVNDELFVRNA
SADEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNIEWSQKCLQDNNWDYTRS
AQAFTHLKAKGEIPEVAFMK
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggggaagtcatacaacgagcacgatgatcgagttagtttccctcaaaga
agaaagaaaggccggggccctttccggtggaagtccggcgaggggaaccggaggtccgga
agagggggctccagcgttcggtcctcccgcctggaggacgacgacagagacgtggcgatg
agcgatgtccaggatgctccccgagtacgatacaccccctatgctgcacgacccaaccgt
cggggtgataactggaacgagcggactcgaattcatgttactctgcccctgcggagagat
cggggtgctgcagagaggggaggggctggcaccagccaggacgggtcgtccaagaactgg
tttaagattacaatcccttatggcaggaaatacgacaagtcgtggctcctgaatgtgatt
cagagcaagtgcagtgtcccttttactcccattgagtttcactatgaaaacacacgggcc
cagttttttgtggaggacgccagtacggcctctgcactgaaggctgttaactataagatt
ttggatcgggagaaccgcaggatatctatcatcatcaactcctcttctccaccccattct
gtgcagaatgaactgaagccagaacaagtagagcagctaaagctgatcatgagcaaaaga
tacgatggctcccagcaagcacttgacctcaagggcctccgttcagacccagatttagtg
gcccagaacattgacgttgtcctgaaccgtagaagctgcatggcagccaccctgcgaatc
atcgaagagaacatccctgagctattgtccttgaacttgagcaacaacaagctctaccgg
ctggatgacttgtccagcattgtgcagaaagcacccaatctaaagatcctaaatctctct
ggaaatgagctaaagtcggagcgggagttggacaagatcaaagggctgaagctggaagag
ctctggcttgacggaaataccctgtgtgacaccttccgagaccagtccacctacatcagc
gccgttcgagagcgatttccaaagctactgcgactggatggccatgagttacccccacca
attgcctttgatgttgaagcccccacaacgttaccaccttgcaagggaagctactttgga
accgagaccctgaagaatctggtcctgcacttcctgcagcagtactatgcggtttatgac
tcgggagaccggcagcggctcctggatgcctaccatgatggagcctgctgctccctgagc
atccctttcaccccccagaaccctgcccgaagtaacttggccgagtacttcaaggatagc
aggaatgtgaagaagcttaaagaccctaccctgcggttccgactgctaaagcacacacgt
ctcaacgtggtggccttcctcaatgagttgcccaaaactcagcatgacatcaattccttc
gtgatagacataagtgcgcagacaagcacactgctgtgtttctctgtcaacggagtcttc
aaagaagtggatggaaagtctcgggactccttgagagcctttacccggacgttcgtcgct
gttcctgccagcaattcagggttgtgcatcgtcaatgatgagctgtttgtgcggaatgcc
agtgctgatgagatccagagagcctttgccatgcctgcacccacaccttcctccagccca
gtgcccaccctctccccagagcagcaggaaatgctgcaggcattctctacccagtctggc
atgaacattgagtggtcccagaagtgcctccaggacaacaactgggactacaccaggtct
gcccaggcctttactcacctcaaggccaagggtgagatcccagaagtggcattcatgaag
tga
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