Capricornis sumatraensis (Sumatran serow): 138083157
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Entry
138083157 CDS
T10522
Symbol
DHX58
Name
(RefSeq) ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
138083157 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csum04054
]
138083157 (DHX58)
Enzymes [BR:
csum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138083157 (DHX58)
Pattern recognition receptors [BR:
csum04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
138083157 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_19
Terminase_6N
AAA_22
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
138083157
NCBI-ProteinID:
XP_068832937
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All DBs
Position
8:complement(92355686..92365071)
Genome browser
AA seq
680 aa
AA seq
DB search
MELRPYQWEVIMPALEGKNIIIWLPTGSGKTRAAAYVAKRHLETVDGAKVVVLVNRVHLV
TQHYEEFSRMLDRRWTITTLSGDMGPRAGFGHMARRHDLLICTAELLQKALASPEEEEHV
ELNAFSLLVVDECHHTHKDTVYNIILSRYLELKLQRTRPLPQVLGLTASPGTGGASTLKG
AIDHVLQLCANLDTWRIMSPQDHSPQLQEHSHQPCKQYDLCHRHTQDPFGDMLKKLMDQI
HDHLEMPKLRRDFGTQTYEQQVVELSQDAAEAGLLEQRVYALHLRRYNDALLIHDTVRAV
DALDTLRDFYNRERATKTGVLHAERWLLALFDDHKNELARLATSGPENPKLEVLEAILQK
QFRSPDSPRGIIFTRTRQSAHSLLLWLQQQPGLQTVGIRPQVLIGAGNNSQKTQMIQMTQ
RDQQEVIQKFRTGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARGRARASQS
VYSFVAAQGSRELQRELTNEALEALMERAVAAVRAMDQAEYQAKIRDLQRAALVKRAVQA
AQRESRQRKFLAEQVQLLCINCMVSVGYGSDLRKVEGTHHVNVNPNFSIYYNVSKQPVDI
SRSFKDWRPGGAISCRNCGEAWGLQIIYKSVKLPVLKVGSMLLETPQGRVRAKKWSRVPF
TVPDFDYVQYAEGLAGLSLD
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgaccctaccagtgggaggtgatcatgcccgccctggaggggaagaatatc
atcatatggctgcccacaggctctgggaagaccagggcagctgcttatgtggccaagagg
catttagagaccgtggacggagccaaggtggttgtattggtcaacagggtgcacctggtg
acccagcattatgaggagttcagccgcatgctggacagacgctggaccatcacaaccctg
agcggggacatggggccacgagctggctttggccacatggcccggaggcacgacctgctc
atctgcacagctgagctgctgcagaaggcactggccagcccggaagaggaggagcatgtg
gaactcaatgccttctccctgctggtggtggatgagtgtcaccacacgcacaaagatacc
gtctacaatatcatcctgagccgatacctggagctgaaactccagaggacccggccgctg
ccacaggtgctgggtctcaccgcctccccaggcactggcggtgcctccacgctcaagggg
gccattgaccacgtcctgcagctctgtgccaacctggacacatggcgcatcatgtcaccc
caggaccatagcccccagctgcaggagcacagccaccagccctgcaaacagtatgacctc
tgccacaggcacacccaggacccgtttggggacatgctgaagaagctcatggaccaaatc
cacgaccacctagagatgcccaagttgagacgggacttcgggacgcagacctatgagcag
caagtggtggaactgagccaggatgcggctgaggcggggctcctggagcagcgggtgtac
gcgcttcatctgcgtcggtacaacgacgcgctgctgatccacgacacggtccgcgcggtg
gatgccctcgacacgctgcgggatttctacaacagggagcgcgccactaagaccggggtc
ctacatgctgagcgctggctgctggcgctgtttgatgatcacaagaatgagctggcccgc
ctggcaactagcggcccggagaacccgaaactggaggtgctggaagcgatcctgcagaag
cagttcaggagccctgacagcccccggggcatcatcttcacccgaacccgccagagcgct
cactccctcctgctgtggctccagcagcagccaggcctgcagacagtgggcatccggcca
caggtgttgattggggctgggaacaacagccagaagactcagatgatccagatgacacag
cgggaccagcaagaagtaatccagaagttccggactggtaccctgaacctcctggtggcc
acaagtgtggcagaggaggggctggacatcccccagtgcaatgtggtggtgcgctatggg
ctcctgaccaatgagatctccatggtccaggcaaggggccgggcccgggccagccaaagc
gtatactcgtttgtggcagcccaaggcagtcgggagctacagcgggagctaacgaatgag
gcgctggaggcgctgatggaacgggcagtggctgctgtgcgggcgatggaccaggccgag
taccaggccaagatccgggatctgcagcgggcagcgttggtcaagcgggcagtccaggca
gcccagcgagagagtcggcagcgcaagttcctggcggagcaggtgcagctcctctgcatc
aactgcatggtgtccgtgggctatgggagtgacctacggaaggtggagggtacccaccac
gtcaatgtgaaccccaacttctcgatctactacaacgtctcaaagcagcctgtggacatc
agcagaagcttcaaggactggaggcccgggggtgccattagctgccggaactgtggggag
gcctggggtctgcagataatctacaagtcagtgaagctgccggtgctcaaagttggcagt
atgctgctggagacaccacaagggcgagtccgggccaagaagtggtcccgtgtgcccttc
actgtgcctgactttgactatgtgcaatacgccgagggcctggcgggcctctctctggac
tga
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