Capricornis sumatraensis (Sumatran serow): 138083264
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Entry
138083264 CDS
T10522
Symbol
LIG3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03410
Base excision repair
Brite
Enzymes [BR:
csum01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
138083264 (LIG3)
DNA repair and recombination proteins [BR:
csum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
138083264 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138083264
NCBI-ProteinID:
XP_068833146
LinkDB
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Position
8:complement(65487481..65508442)
Genome browser
AA seq
1003 aa
AA seq
DB search
MTLAFKILFPPTLRALRKKELCLFREQHHRPDIRHFGQWSETVLRGHHHLQRRKPVPSFR
ESNLRPRATCLVFLPGSHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIG
KVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEENEKEQISQH
IADLTSKATSTPKKKAVVQAKLTATGQVASPVKGASFVTNSNPRKFSGFSAKPNNSGEAH
SSPTPKTPKTSLSSSKCDPKHKDCLLREFRKLCAMVAENPSYNTKTQIIQDFLQKGSAGD
GFHGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCSVDDMTRDLEQGDVSETIRVF
FEQSKSFPPAAKSLLTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIK
HDLKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKEPGQRRALSVQASL
MTPVQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHK
VAHFKDFIPQAFPGGHSMILDSEVLLIDNRTGRPLPFGTLGVHKKAAFQDANVCLFVFDC
IYFNDVSLMDRPLCERRKLLYDNMVEIPNRIMFSEMKQVTKASDLADMINRVIREGLEGL
VLKDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYD
PSSQKWCTVTKCAGGHDDVTLARLQTELDMVKISKDPSKIPNWLKINKIYYPDFIVPDPK
KAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKERAA
FAIMAGDEGSSAAGGSSGENEGTSEPAVPHKAPRASPKQPPANAKKAGGKPGSCTSRGGN
LPAAKPSPVRVGVKRKAPDVTPCQAKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAFDGDL
VQEFDVASATHVLGGRDRNPEAQQVSPEWIWACIRKRRLVAPC
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgactttggcttttaagatcctcttcccaccaactctccgtgcactcaggaaaaaagaa
ctgtgcctattccgagaacaacatcaccggcctgacataagacactttggccagtggtca
gagacagttcttcgtggacaccaccacctccagagaagaaagcctgttccgtcctttcgg
gaaagcaacctaagaccacgtgccacctgccttgttttcttgccagggtcgcatgtggga
ctctgcagtggtccctgtgagatggcagaacaacgcttctgtgtggactacgccaagcgt
ggcaccgccggctgcaaaaaatgcaaggaaaagattgtcaagggcgtatgccgaatcggc
aaagtggtgcccaatcccttttcagagtccgggggcgatatgaaagagtggtaccacatt
aaatgtatgtttgagaaactggagcgggcccgggccaccacaaaaaaaattgaggacctc
accgagctggaaggctgggaagagctggaagagaatgagaaagagcagataagtcagcac
attgcagatctaacttccaaggcaacaagcacaccaaagaagaaagctgttgtccaagct
aagttgacagccactggccaagtagcatctccagtgaaaggtgcctcatttgtcaccaat
tccaatccccgaaagttttctggcttttcagccaagcccaacaactctggggaagcccac
tccagccctacccctaagacccctaagacaagtctgtcctcaagcaaatgtgacccgaaa
cacaaggattgtctgctgcgtgagtttcggaagttgtgtgccatggtggctgaaaatcct
agctacaacacgaaaacccagatcatccaggacttccttcagaaaggctcagcaggagat
ggtttccacggtgacgtgtacctaacagtgaagctgctgctgccgggtgtcattaagagt
gtttacaacttgaatgataagcagatcgtgaagcttttcagccgcatttttaactgcagc
gtggatgacatgacacgagacctggagcagggtgacgtgtcagagacaatcagagtcttc
tttgagcagagcaagtctttccctccagctgccaagagcctccttaccatccaggaggtg
gacgaattcctcctgcggctctccaagctcaccaaggaggatgagcagcaacaggccctg
caggatatcgcctccaggtgtacagccaacgaccttaagtgcatcatcaggctgataaag
cacgatctgaagatgaactcgggtgcaaaacacgtgttagatgccctagaccccaatgcc
tatgaagccttcaaagcctcacgcaacctgcaggatgtggtggagcgggtcctccgcaat
gagcaggaggtggagaaggagccaggccagagacgagctctgagtgtccaggcctctctg
atgaccccagtgcagcccatgctggctgaggcctgcaagtccatcgagtatgccatgaag
aagtgtccgaacggcatgttctctgagatcaagtatgacggggagcgagtccaggtgcat
aaaaagggggaccacttcagttacttcagccgcagtctcaagcccgtcctgccacacaag
gtggcccactttaaggacttcatcccccaggctttccctgggggccacagcatgatcttg
gactctgaggtgctcctgattgacaacaggacaggcagaccactgccctttgggactctg
ggagtgcacaagaaagctgccttccaggatgctaatgtctgcctgtttgtttttgattgt
atctacttcaatgatgtcagcttgatggataggcctctgtgtgagcggcggaagcttctt
tatgacaacatggtggaaattcccaaccggatcatgttctcagaaatgaagcaagtcaca
aaagcttccgacttggcggacatgatcaacagggtgatccgagaggggctggaagggctg
gtgctgaaggacgtgaagggtacatatgagcctggaaagcggcattggctgaaagtgaag
aaagactatttgaacgagggtgccatggccgacacagctgacctggtggtgcttggggcc
ttctacgggcaagggagcaaaggtggcatgatgtccatcttcctcatgggctgctatgac
ccgagcagccagaagtggtgcaccgtcaccaagtgtgcaggaggccacgacgacgtgacg
ctcgcccgcctgcagaccgaactggacatggtgaagatcagcaaggatcccagcaagata
cccaactggctgaaaatcaataagatctactaccctgacttcatcgttccagacccaaag
aaagctgccgtgtgggagatcacaggggctgaattctcgaaatctgaggctcacacagcc
gatgggatctccatccgattccctcgctgcacccgaatccgtgatgataaggactggaag
tctgccacgaacctcccccaactcaaggagctgtaccaactgtccaaggagcgggcggcc
ttcgccataatggccggggatgaggggagctccgctgcaggaggcagcagcggggagaac
gagggcacctcagagccagctgtgcctcacaaggccccgagggcctcccccaagcagcct
cccgccaacgccaagaaggctgggggcaagccgggcagctgcaccagcagaggcggcaac
ctaccagctgcaaagccctcccctgtgagagtgggggtgaagcggaaggctcctgatgtg
accccgtgccaagccaaggtgctgctggacatcttcactggagtgcggctctacctgcca
ccctccacgccagacttcagccgcctcagacgctactttgtggcattcgatggggacctg
gtgcaagaatttgacgtggcctcagccacacacgtgctgggtggcagggacaggaacccc
gaggcccagcaggtctccccggagtggatctgggcatgtatccggaaacggaggctggtg
gctccttgctag
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