Capricornis sumatraensis (Sumatran serow): 138083363
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Entry
138083363 CDS
T10522
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03013
Nucleocytoplasmic transport
csum03015
mRNA surveillance pathway
csum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138083363 (CASC3)
09122 Translation
03013 Nucleocytoplasmic transport
138083363 (CASC3)
03015 mRNA surveillance pathway
138083363 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csum03019
]
138083363 (CASC3)
Messenger RNA biogenesis [BR:
csum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
138083363 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
138083363
NCBI-ProteinID:
XP_068833311
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All DBs
Position
8:90606095..90627769
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AA seq
703 aa
AA seq
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MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSVEGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGDDGEYSEEENSKVELKSEAN
DAANSSAKDEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIGERPSKSHRHQGPGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRTGFRPAEAGGQHAGRSGETVKHETSYRSRHLEQTPVR
DPSPEADAQVLGSPEKEEVAPEIPNPAPDTAPPAPDRPVEKKSYSRARRTRIKAGDAGKV
AEEVPPPPEGLTPAPPVPEATPPTPAKTGNWEAPVDSTTGGLEQDVAQLNITEQNWSPGQ
PAFLQSRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcttcgcaggacaccgaggacgaagaatctggtgcc
tccggctcagacagcggcggttccccggcgcggggcggcgggagctgcagcggtagcgtt
gaaggcggcggcagcggctctctgccttcccagcgcggaggccgagctggggcccttcat
ctgcggcgagtggagagcgggggcgctaagagcgctgaggagtcggagtgtgagagtgaa
gatggcatcgagggcgatgctgttctctcggattatgaaagtgcagaagattcagaaggc
gatgacggggagtacagtgaagaggaaaactccaaagtggagctgaaatcagaagccaat
gatgctgctaattcttcagcaaaagatgagaagggagaagaaaagcctgataccaaaggc
actgtgactggagagaggcaaagtggggatggacaggaaagcacagagcctgtggagaac
aaagtcggtaaaaagggccctaaacatttggatgatgatgaagatcggaagaacccagcg
tacataccccggaaagggctcttttttgagcatgatcttcgagggcagactcaggaggaa
gaagtcagacccaagggacgtcagcgaaagctgtggaaggatgagggtcgctgggagcat
gacaagtttcgggaagatgaacaggctccaaagtcccgacaggagctcattgctctttat
ggctatgacatccgctcagctcacaatcctgatgatatcaaaccccgaagaatccggaaa
cctaggtttgggagtcctccacaaagagatccaaactggattggtgagcggccaagtaag
tctcatcgccaccagggtcctgggggcaccctaccacccaggacatttatcaacaggaat
gctgcaggtactggccgcatgtcggctcccaggaattactctcgatctggaggcttcaag
gaaggtcgtactggttttaggcctgcagaagctggtggacagcatgctggccggtctggt
gagactgttaaacacgagactagttaccggtctcggcacttggagcagactcctgtaagg
gatccatctccagaagcagatgctcaagtgcttggcagtcctgagaaggaagaggtagcc
cctgagataccaaatcctgctcctgatactgcaccaccagctcctgacaggcctgttgaa
aagaaatcctattcgcgggcaagaagaaccagaatcaaagctggagatgcaggcaaggtt
gcagaggaggtgccccctccacccgaagggctgaccccagcacctccagttccagaagct
acacctcctacacctgctaagactggaaactgggaggctccagtggattctactacaggg
ggtcttgaacaagatgtggcacaactaaatataacagaacagaactggagtccagggcag
cctgccttcctgcagtcacgggagcttcggggtatgcccaaccacatacacatgggagca
ggacctccacctcagttcaaccggatggaagaaatgggtgtccagggtgggcgagccaaa
cgctattcatcacaacggcaaagacctgtgccggagccccctgcccctcctgtgcatatc
agcatcatggaaggacattactatgatccattgcagttccagggaccaatctatacccat
ggtgacagccctgccccactgcctcctcagggcatgattgtacagccagaaatgcatctt
ccccacccaggtttacatccccaccagacaccggcgcctctgcccaatccaggcctctat
cccccaccagtatccatgtctccagggcagccaccacctcagcagttgcttgctcctact
tacttttcggctccaggcgtcatgaactttggtaaccccagttacccttatgctccaggg
gcattgcctcccccaccacctcctcatctgtatcctaacacacaggccccatcgcaggta
tatggaggagtgacctactataaccccgcccagcagcaggtgcagccaaagccctcccca
ccccggaggactccccagccagtcaccatcaagcccccaccgcctgaggttgtaagcagg
ggttccagctaa
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