Capricornis sumatraensis (Sumatran serow): 138084461
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Entry
138084461 CDS
T10522
Symbol
SF1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
csum Capricornis sumatraensis (Sumatran serow)
Pathway
csum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138084461 (SF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csum03041
]
138084461 (SF1)
Spliceosome [BR:
csum03041
]
Complex A
Other components
Complex A specific factors
138084461 (SF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
SLU7_N
zf-CCHC_5
zf-CCHC_3
KH_NusA_1st
CHP02642
Motif
Other DBs
NCBI-GeneID:
138084461
NCBI-ProteinID:
XP_068834858
LinkDB
All DBs
Position
8:8025401..8039198
Genome browser
AA seq
763 aa
AA seq
DB search
MATGANATPLGKLGPPGLPPLPGPKGGFEPGPPTAPGPGAGLLVSGPLPPPPVGSVGALT
AAFPFAALPPPPPPPPPPPPQQPPPPPPPSSGSSYSPPQPPPPPPLYQRVSPPQPPPPQP
PRQDQQPGPTGGGGDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQL
QIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEM
VALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIM
IRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQ
NDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQR
PGDPQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPP
SLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHN
PNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMG
MMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSA
GTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMM
YAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggagcgaacgctacgccgctgggtaagctgggccccccaggcctccctccc
ctccctggccccaaagggggcttcgagccgggaccaccgactgcccccgggcctggggcg
gggctgctggtgtccgggccgctgccgcccccgcccgtgggctcggtgggggccctgacc
gcggccttcccctttgcggcgctaccgccgccgccgccgccgccgccccccccgcctccc
cagcagccgccgccgccaccgcccccctcctcgggctcctcgtactcgccgccgcagccg
ccccctccgccgccgctctaccagcgcgtgtcgccaccacagccaccgccaccccagccg
ccgcgtcaggaccagcagccgggcccgaccggcggcggaggagacttccccagtaagaag
cggaagaggagccgctggaatcaagacacaatggaacagaagacggtgattccaggaatg
cctacagtcatcccccctggacttactcgggagcaagaaagagcttatatagtgcaactg
cagatagaagacctgactcgtaaactgcgcacaggagacctgggcatcccccctaaccct
gaggacaggtccccttcccctgagcccatctacaatagtgaggggaagaggcttaacact
cgcgagttccgcacccgcaagaaacttgaggaggaacggcataatctcatcacggaaatg
gttgccctcaaccctgatttcaagcctcctgcagattacaaacctccagcaacacgtgtg
agcgataaagtcatgatcccacaagatgagtatccagaaatcaattttgtggggctgctg
attgggccaagagggaacaccttaaagaacatagagaaggagtgtaatgccaagatcatg
atccgggggaaaggttctgtgaaagaaggaaaagttgggcgcaaagatggccagatgctg
ccgggagaagatgagccacttcatgccctggtcactgccaataccatggagaatgtgaag
aaagcagtagaacagataagaaacattctgaagcagggtatcgagactcctgaggaccag
aatgacctacggaagatgcaacttcgagagttggctcgcttgaatgggacccttcgggaa
gatgataacaggatcttaagaccctggcagagctctgagacccgcagcattaccaatacc
acagtgtgtaccaagtgtggaggggctggccacattgcttccgattgcaagttccaaagg
cctggtgacccccagtcagctcaggataaagcgcggatggataaagaatacttgtccctc
atggctgaactgggggaggcacctgtgcccgcatctgtgggctccacctctgggcctgcc
accacaccactggccagtgcacctcggcctgctgctcccgccaacaacccacctccgccg
tctctcatgtccactacccagagccgcccaccctggatgaattccggcccgtcagagagt
cggccctaccatggcatgcatggaggtggccctggtgggcccggaggtggtccccacagc
ttcccacacccgctgcccagcctcacaggtgggcatggtggacatcccatgcagcacaac
cctaatggaccaccgcccccctggatgcagcccccaccaccaccgatgaaccagggcccc
cacccacctgggcaccatggccctcctccaatggatcagtacctgggaagtacgcctgtg
ggctctggggtctatcgcctgcatcaaggaaaaggtatgatgccgccgccacctatgggc
atgatgccgccgccgccgccgcctcccagtgggcagcctccaccccctccctctggtcct
cttcccccgtggcagcagcagcagcagcagcctccgccaccccctccgcccagcagcagt
atggcttccagtacccccttgccatggcagcaaaatacgacgactaccaccacgagcgct
ggcacagggtccatcccgccatggcaacagcagcaggcggctgccgcagcttctccagga
gcccctcagatgcaaggcaaccccactatggtgcccctgcccccaggggtccagccgcct
ctgccgcccggggcccctccccctccgccgcctccgccgcctggttccgccggcatgatg
tatgccccaccccctcctcctccgcctcccatggacccttctaactttgtcaccatgatg
ggcatgggggtggcgggcatgccaccctttgggatgcctccagctcccccaccgcctcca
ccacagaactag
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