Capricornis sumatraensis (Sumatran serow): 138085011
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Entry
138085011 CDS
T10522
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
csum Capricornis sumatraensis (Sumatran serow)
Brite
Transcription factors [BR:
csum03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
138085011 (SNAPC4)
Transcription machinery [BR:
csum03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
138085011 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138085011
NCBI-ProteinID:
XP_068835355
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Position
1:3122188..3143583
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AA seq
1333 aa
AA seq
DB search
MDVDAERERISREIEQLERILDPSCPSVSMDVSESSLDSDSDADSLPDEDSDSDAAGPLL
SEEERWGEANNDEGDPKEKALPEDPETCLQLNMVYQEVVREKLAEVSLLLAQNREQQEEV
MGDLAGVRGLRVKDGRNPPPNLYLGHFMKPYFRDKVTGVGPPANEDTREKAAQGIKAFKE
LLVTKWKTWEKVLLRKSVVSDRLQRLLQPKLLKLEYLQQKQSRATSELEKQILEKQAREA
EEEVQDINQLPEEALLGDRLDSHDWDKISNVNFEGGRSTEEIRKFWQNYEHPSINKQEWS
EQEVTQLKAVAAKHGHLDWQSIAEELGTRRTAFQCLQKYQQHNPALKRREWTEEEDRMLT
QLVQAMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLRKGLWAPEEDAKLLQAVAK
YGEQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNSREVKKLIELIGKHGVGHWAK
IASELPHRSGSQCLSKWKIMVRQRQRARRRARWSPSSGSSSDSSWEGSEPEEAPKDVPEE
APAGGLEPPPAQYAVPDMDLWVPARQSTEELAGAVAGGCPRPPEGPDTAQAPTPAPAPAG
QLASRSQSADPRSVGCPCPVAAHRWSSKGPLSRERLRQLHPPGSAPGLSPGGRSRDEARA
RVQPQWARTMRRRQGHALQRRLLGRKLLTAVSPWVGEADLLCARPRPAMWPRRADGIRRQ
LQGAHLASTPVFALLIQLFQIDAPGCVEVVRERKTWPPALLQAGAWDPPPLQEPSSARSA
PGCLTQSVPAQGAAKQSTCPEGVRGPQACRTASTPQAPALAPCRPRPKPKTVSELLREKR
LREARARRAMQAPAVLSARVLVSAPVVLQPLAPPGTSVSRVVLSGPGGPPVTSSSVLGSW
APAKAERGLTLHAFALGPATSRSPGQVPASCPLSALGQSQAPATSRKQGLPEAPPLLPAA
PSPVQPVSLTPALGTPTVASTPLPVTWVLTAQGLLPVPLQAVVSLPAPTGAPDPTQLSVT
LPPSPAETPASQSCPGPPAASIALEPGPPCRMEPLSGSPTEVAESCGLAGLASPEEALVA
GEMSSPRTPSQDTPLAHHLATEPPSSSPPPLHGAPGAASGPGEPQPLDLEEPLLPWLGLE
NGPLDLSLLSQESEAATQEWLRGQQGVPVPALGSQLAYQPPTLCSLRALSGLLLRKKDLE
HGAAVLAPDGPAGALQASLGQVRERLRNSPAYLLLRARFLAAFTLPALLATLSPRGVPTT
LSASAGPDPETDSDDFNPEEPELTDSDGQPGDPTQGAPDPSQGLAHSCLDSPDNPDMLQT
RRLRHVRKRRQLQ
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggatgctgagagagagaggatctccagggagatcgagcagctggagaggatc
ttggacccctcctgcccgagcgtcagcatggatgtctcggagtcaagtctagactcggat
tcggatgcagattcgctgcccgacgaggactcggactcggacgctgctggcccactgctc
tcggaggaagagaggtggggtgaagccaacaacgacgagggcgaccccaaggagaaggcg
ctccctgaagacccagagacctgcctgcagctgaacatggtctaccaggaggtggtccgg
gagaagctggcggaggtcagcctgttgctggcccagaaccgggagcagcaggaggaggtc
atgggcgacctcgcgggcgtcaggggcctcagggtgaaagacggcaggaacccgcccccg
aacctgtacctcggacacttcatgaagccctacttcagggacaaggtcacgggagtgggg
cctcctgctaatgaggacacgcgggagaaggccgcccagggcatcaaggctttcaaggag
ctcctggtgaccaagtggaagacctgggaaaaggtcctgctcaggaagtcggtggtgagt
gaccgcctgcagcggctgctccagcccaagttgctcaagctggagtacctgcagcagaag
cagagcagggccacgagcgagctggagaagcagatcctggagaagcaggccagggaggcg
gaggaggaggtgcaggacatcaatcagctcccggaggaggccttgctgggcgacaggctg
gacagccacgactgggacaagatctccaatgtcaacttcgagggaggccgcagcacggag
gagattcgcaagttctggcagaactacgagcacccgagcatcaacaaacaggagtggagt
gaacaggaggtgacccagctgaaggccgtcgcggccaagcacggccacctggactggcag
agtatcgctgaggagctggggacgcgccgcaccgccttccagtgcctgcagaagtaccag
cagcacaacccggccctgaagcgcagggagtggacggaggaggaggaccgcatgctcacg
cagctcgtgcaggccatgcgcgttggcagccacatcccctaccggaggatcgtctactac
atggagggccgggactccatgcagctcatctaccgctggaccaagagcctggaccccggc
ctgaggaaggggctctgggccccagaggaggacgcgaagttgcttcaagcagttgccaag
tacggggagcaggattggtttaaaatccgggaagaggtgccaggtaggagcgatgcccag
tgccgagaccgatatctcagaaggttacatttcagcttgaaaaagggacgatggaactcc
agagaagtgaagaagttaattgaactgataggaaaacacggtgtcggtcactgggcaaaa
atagcctctgaactgccccatcggtcaggctcccagtgcctgagcaaatggaagatcatg
gtcaggcagcggcagcgggcccgccgcagggcgcgctggagcccgagcagtgggagcagc
agcgacagcagctgggagggttcagagcccgaggaggccccgaaggacgtcccggaggag
gccccagcgggcggcctggagccgccgccagctcagtatgccgtgccagacatggacctg
tgggtgcccgcccggcagagcacagaggagctagcgggagcggtcgccgggggctgccca
cgccctcccgagggccctgacacggcccaggccccaaccccagccccagcccccgcaggg
cagctggcctccaggagccagagcgcagacccgaggagcgtcgggtgcccgtgcccagtt
gctgctcaccgctggagctccaaggggccactgagcagggagaggctgaggcagctgcac
ccgcctggctcagccccagggctcagccctggcggccgcagcagggatgaggccagggcc
cgcgtgcagccacagtgggccaggaccatgcggcggcgccagggacacgccctgcagagg
aggctcttggggcgcaagctcctgacggccgtgagcccctgggtgggggaagccgacctg
ctctgcgctcgcccgaggcccgccatgtggccccgtcgagctgatggtatcaggagacag
ctgcagggcgcccacctggccagcaccccagtgttcgccctcctcattcagctgttccag
attgacgcgcctggctgcgtggaggtggttcgagagaggaagacctggcctcccgccctg
ctccaggctggtgcctgggacccgccgcccctgcaggaaccctcaagtgcccgcagcgcc
ccaggctgcctcacccagagcgtgccagcccaaggggccgcgaagcagagcacctgccct
gagggggtcagagggccgcaggcctgccgcacagcgtccacaccgcaggcacccgccctg
gctccgtgcagaccccggcccaagcccaagaccgtgtctgagctgcttcgggagaagcgg
ctgcgggaggcccgagcccggagggccatgcaggcccccgccgtcctctcagcccgggtg
ctggtctccgcgcccgtggtcctccagccactggccccaccaggcacctccgtctccaga
gtcgtgctgtctgggcctggaggccctccagtgaccagttccagtgttttgggctcctgg
gcaccagccaaggctgagagaggcctgactctgcacgcctttgccctcggcccggccacc
tccaggtcccctggccaggttcctgcaagttgcccactgagtgctcttggacagtctcag
gcccctgccacgtcccggaagcagggcctgcctgaagcacccccccttctgcccgcggcc
cccagccctgtccagcccgtcagcctgacgccagccctgggcacacccacggtggccagc
acccctctgcccgtcacctgggtcctcacggcacaggggctgctcccggtacccctgcag
gccgtggtgagcctgccagcgccgacaggggctcctgaccccacacagctgtcggtgact
ctgccgccctcgcccgccgagactccggccagccagagctgccctgggccaccagcagcc
agcatagccttggagccggggcctccctgcaggatggagcccctgagcgggagccccaca
gaggtggctgagtcctgtggccttgcggggctcgcctcccctgaggaggccctggtggct
ggggagatgtcttcacccaggaccccctcccaggacacgcccctggcccaccacctggca
accgagccccccagctccagcccaccgcccctgcacggggccccaggggctgcctcaggg
cccggggagccccagcctctggacctggaggagcccctgctgccctggctggggctggag
aacggacccctggacttgagcctcctttcccaggagagcgaggcagccacacaggagtgg
ctgagggggcagcaaggggtgcccgtgcctgccctggggagccagctggcctaccagccg
cccacgctgtgcagcctgcgggcgctgtctggcctcctgctgcgcaagaaggacttggag
catggggccgcggtcctggcaccagatgggccggccggcgccctgcaggcctcgctgggg
caggtgcgcgagcggcttcgcaacagcccagcctacctgcttctgcgggcgcgcttcctg
gccgccttcaccctgcctgcgctcctagccaccctatccccccgcggcgtccccaccacc
ctgtcggcaagcgccgggcctgaccctgagacagacagtgatgacttcaacccggaggag
ccggagctcactgacagtgatgggcagcccggggaccccacccagggagccccggacccc
agccagggccttgcccactcctgcctggacagccccgacaacccggacatgctgcagaca
cggcgcttgaggcatgtccgcaagcggcggcagctacagtga
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